RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 IQGAP1P46940 1657 aa18.33■□□□□ 0.53
NUP98-204ENST00000397004 RTN4Q9NQC3 1192 aaKnown RBP18.32■□□□□ 0.52
NUP98-204ENST00000397004 MYOM1P52179 1685 aa18.32■□□□□ 0.52
NUP98-204ENST00000397004 ANO8Q9HCE9 1232 aaPredicted RBP18.32■□□□□ 0.52
NUP98-204ENST00000397004 CCDC146Q8IYE0 955 aa18.31■□□□□ 0.52
NUP98-204ENST00000397004 OSCARQ8IYS5 282 aa18.31■□□□□ 0.52
NUP98-204ENST00000397004 TRMT2AQ8IZ69 625 aaKnown RBP18.31■□□□□ 0.52
NUP98-204ENST00000397004 SLFN5Q08AF3 891 aa18.29■□□□□ 0.52
NUP98-204ENST00000397004 USP35Q9P2H5 1018 aa18.29■□□□□ 0.52
NUP98-204ENST00000397004 ARAP3Q8WWN8 1544 aa18.29■□□□□ 0.52
NUP98-204ENST00000397004 DUOX2Q9NRD8 1548 aa18.28■□□□□ 0.52
NUP98-204ENST00000397004 BCAR3O75815 825 aa18.28■□□□□ 0.52
NUP98-204ENST00000397004 PLCH2O75038 1416 aa18.28■□□□□ 0.52
NUP98-204ENST00000397004 ABCA9Q8IUA7 1624 aa18.27■□□□□ 0.52
NUP98-204ENST00000397004 NFKBIBQ15653 356 aa18.27■□□□□ 0.52
NUP98-204ENST00000397004 TRAPPC8Q9Y2L5 1435 aa18.27■□□□□ 0.52
NUP98-204ENST00000397004 KNSTRNQ9Y448 316 aa18.26■□□□□ 0.51
NUP98-204ENST00000397004 GOLGA2Q08379 1002 aa18.26■□□□□ 0.51
NUP98-204ENST00000397004 CENPQQ7L2Z9 268 aaPredicted RBP18.26■□□□□ 0.51
NUP98-204ENST00000397004 IGHDP01880 384 aa18.24■□□□□ 0.51
NUP98-204ENST00000397004 ABCC1P33527 1531 aa18.24■□□□□ 0.51
NUP98-204ENST00000397004 SYNMO15061 1565 aa18.24■□□□□ 0.51
NUP98-204ENST00000397004 APAF1O14727 1248 aa18.24■□□□□ 0.51
NUP98-204ENST00000397004 BRPF3Q9ULD4 1205 aa18.24■□□□□ 0.51
NUP98-204ENST00000397004 ASXL1Q8IXJ9 1541 aa18.23■□□□□ 0.51
NUP98-204ENST00000397004 CARD14Q9BXL6 1004 aa18.23■□□□□ 0.51
NUP98-204ENST00000397004 CLTCL1P53675 1640 aa18.23■□□□□ 0.51
NUP98-204ENST00000397004 PPM1GO15355 546 aaPredicted RBP18.23■□□□□ 0.51
NUP98-204ENST00000397004 USP19O94966 1318 aa18.23■□□□□ 0.51
NUP98-204ENST00000397004 SPHKAPQ2M3C7 1700 aa18.23■□□□□ 0.51
NUP98-204ENST00000397004 RGS3P49796 1198 aa18.22■□□□□ 0.51
NUP98-204ENST00000397004 WDR43Q15061 677 aaKnown RBP eCLIP18.22■□□□□ 0.51
NUP98-204ENST00000397004 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
NUP98-204ENST00000397004 FAM161AQ3B820 660 aa18.22■□□□□ 0.51
NUP98-204ENST00000397004 SCAF11Q99590 1463 aaKnown RBP18.21■□□□□ 0.51
NUP98-204ENST00000397004 SEC24BO95487 1268 aa18.2■□□□□ 0.5
NUP98-204ENST00000397004 AFAP1Q8N556 730 aa18.19■□□□□ 0.5
NUP98-204ENST00000397004 FRAT1Q92837 279 aaPredicted RBP18.19■□□□□ 0.5
NUP98-204ENST00000397004 TRPM2O94759 1503 aa18.19■□□□□ 0.5
NUP98-204ENST00000397004 DDRGK1Q96HY6 314 aa18.18■□□□□ 0.5
NUP98-204ENST00000397004 PTPRTO14522 1441 aa18.18■□□□□ 0.5
NUP98-204ENST00000397004 CEP152O94986 1710 aa18.18■□□□□ 0.5
NUP98-204ENST00000397004 GSE1Q14687 1217 aa18.17■□□□□ 0.5
NUP98-204ENST00000397004 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
NUP98-204ENST00000397004 SCAPERQ9BY12 1400 aa18.17■□□□□ 0.5
NUP98-204ENST00000397004 FRAT2O75474 233 aaPredicted RBP18.17■□□□□ 0.5
NUP98-204ENST00000397004 UGGT1Q9NYU2 1555 aa18.17■□□□□ 0.5
NUP98-204ENST00000397004 NKTRP30414 1462 aaKnown RBP18.16■□□□□ 0.5
NUP98-204ENST00000397004 ERVK-7P63135 1459 aa18.16■□□□□ 0.5
NUP98-204ENST00000397004 CFAP70Q5T0N1 1121 aa18.15■□□□□ 0.5
NUP98-204ENST00000397004 EIF3AQ14152 1382 aaKnown RBP18.14■□□□□ 0.49
NUP98-204ENST00000397004 NPC1L1Q9UHC9 1359 aa18.14■□□□□ 0.49
NUP98-204ENST00000397004 TNNQ9UQP3 1299 aa18.14■□□□□ 0.49
NUP98-204ENST00000397004 ADGRF5Q8IZF2 1346 aa18.13■□□□□ 0.49
NUP98-204ENST00000397004 PANK1Q8TE04 598 aa18.12■□□□□ 0.49
NUP98-204ENST00000397004 ZFYVE16Q7Z3T8 1539 aa18.11■□□□□ 0.49
NUP98-204ENST00000397004 NLRP1Q9C000 1473 aa18.11■□□□□ 0.49
NUP98-204ENST00000397004 DEPDC5O75140 1603 aa18.1■□□□□ 0.49
NUP98-204ENST00000397004 KDM5AP29375 1690 aaKnown RBP18.1■□□□□ 0.49
NUP98-204ENST00000397004 INO80Q9ULG1 1556 aaPredicted RBP18.09■□□□□ 0.49
NUP98-204ENST00000397004 ABCA6Q8N139 1617 aa18.09■□□□□ 0.49
NUP98-204ENST00000397004 VIRMAQ69YN4 1812 aaKnown RBP18.09■□□□□ 0.49
NUP98-204ENST00000397004 EFCAB2Q5VUJ9 269 aa18.09■□□□□ 0.49
NUP98-204ENST00000397004 WWC1Q8IX03 1113 aa18.09■□□□□ 0.49
NUP98-204ENST00000397004 COG6Q9Y2V7 657 aa18.09■□□□□ 0.49
NUP98-204ENST00000397004 SHPRHQ149N8 1683 aa18.08■□□□□ 0.48
NUP98-204ENST00000397004 RIMBP3CA6NJZ7 1639 aa18.08■□□□□ 0.48
NUP98-204ENST00000397004 RIMBP3BA6NNM3 1639 aa18.08■□□□□ 0.48
NUP98-204ENST00000397004 RIMBP3Q9UFD9 1639 aa18.08■□□□□ 0.48
NUP98-204ENST00000397004 RLBP1P12271 317 aa18.07■□□□□ 0.48
NUP98-204ENST00000397004 FANCAO15360 1455 aa18.07■□□□□ 0.48
NUP98-204ENST00000397004 VWDEQ8N2E2 1590 aa18.07■□□□□ 0.48
NUP98-204ENST00000397004 E9PSI1 815 aa18.07■□□□□ 0.48
NUP98-204ENST00000397004 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.06■□□□□ 0.48
NUP98-204ENST00000397004 SPAG9O60271 1321 aaKnown RBP18.06■□□□□ 0.48
NUP98-204ENST00000397004 RTEL1-TNFRSF6BF6WH68 1400 aa18.06■□□□□ 0.48
NUP98-204ENST00000397004 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.06■□□□□ 0.48
NUP98-204ENST00000397004 RRP7AQ9Y3A4 280 aaKnown RBP18.06■□□□□ 0.48
NUP98-204ENST00000397004 CDCA8Q53HL2 280 aa18.05■□□□□ 0.48
NUP98-204ENST00000397004 MROH1Q8NDA8 1641 aa18.05■□□□□ 0.48
NUP98-204ENST00000397004 TET3O43151 1660 aa18.05■□□□□ 0.48
NUP98-204ENST00000397004 PCDHB15Q9Y5E8 787 aa18.04■□□□□ 0.48
NUP98-204ENST00000397004 KIAA1210Q9ULL0 1709 aa18.04■□□□□ 0.48
NUP98-204ENST00000397004 MAP3K4Q9Y6R4 1608 aa18.04■□□□□ 0.48
NUP98-204ENST00000397004 MROH2AA6NES4 1674 aa18.03■□□□□ 0.48
NUP98-204ENST00000397004 CLUAP1Q96AJ1 413 aa18.03■□□□□ 0.48
NUP98-204ENST00000397004 NEUROD2Q15784 382 aa18.02■□□□□ 0.48
NUP98-204ENST00000397004 CFAP74Q9C0B2 1584 aa18.02■□□□□ 0.48
NUP98-204ENST00000397004 TNNT2P45379 298 aaPredicted RBP18.02■□□□□ 0.47
NUP98-204ENST00000397004 PDE3AQ14432 1141 aa18.01■□□□□ 0.47
NUP98-204ENST00000397004 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
NUP98-204ENST00000397004 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
NUP98-204ENST00000397004 IFT172Q9UG01 1749 aa18■□□□□ 0.47
NUP98-204ENST00000397004 IQSEC2Q5JU85 1478 aa18■□□□□ 0.47
NUP98-204ENST00000397004 POLR3AO14802 1390 aaPredicted RBP18■□□□□ 0.47
NUP98-204ENST00000397004 RARSP54136 660 aaKnown RBP18■□□□□ 0.47
NUP98-204ENST00000397004 CENPJQ9HC77 1338 aaPredicted RBP18■□□□□ 0.47
NUP98-204ENST00000397004 ATP7AQ04656 1500 aa18■□□□□ 0.47
NUP98-204ENST00000397004 KIDINS220Q9ULH0 1771 aa17.99■□□□□ 0.47
NUP98-204ENST00000397004 SLC12A5Q9H2X9 1139 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms