RNA–Protein interactions for RNA: ENST00000396334.7

MYD88-201, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MYD88, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-201ENST00000396334 VIRMAQ69YN4 1812 aaKnown RBP18.58■□□□□ 0.56
MYD88-201ENST00000396334 TTC37Q6PGP7 1564 aa18.58■□□□□ 0.56
MYD88-201ENST00000396334 RSPH6AQ9H0K4 717 aa18.57■□□□□ 0.56
MYD88-201ENST00000396334 DUOX2Q9NRD8 1548 aa18.56■□□□□ 0.56
MYD88-201ENST00000396334 MYOM1P52179 1685 aa18.56■□□□□ 0.56
MYD88-201ENST00000396334 PPP2R1AP30153 589 aa18.56■□□□□ 0.56
MYD88-201ENST00000396334 FAM161AQ3B820 660 aa18.56■□□□□ 0.56
MYD88-201ENST00000396334 PIK3C2GO75747 1445 aa18.55■□□□□ 0.56
MYD88-201ENST00000396334 TRMT2AQ8IZ69 625 aaKnown RBP18.54■□□□□ 0.56
MYD88-201ENST00000396334 ABCC2Q92887 1545 aa18.54■□□□□ 0.56
MYD88-201ENST00000396334 SPHKAPQ2M3C7 1700 aa18.53■□□□□ 0.56
MYD88-201ENST00000396334 FRAT2O75474 233 aaPredicted RBP18.53■□□□□ 0.56
MYD88-201ENST00000396334 AMER1Q5JTC6 1135 aaPredicted RBP18.53■□□□□ 0.56
MYD88-201ENST00000396334 PKNOX2Q96KN3 472 aa18.53■□□□□ 0.56
MYD88-201ENST00000396334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.53■□□□□ 0.56
MYD88-201ENST00000396334 ARHGAP5Q13017 1502 aa18.53■□□□□ 0.56
MYD88-201ENST00000396334 ASXL1Q8IXJ9 1541 aa18.53■□□□□ 0.56
MYD88-201ENST00000396334 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
MYD88-201ENST00000396334 FAM43AQ8N2R8 423 aa18.52■□□□□ 0.56
MYD88-201ENST00000396334 FBLN2P98095 1184 aa18.52■□□□□ 0.56
MYD88-201ENST00000396334 GOLGA2Q08379 1002 aa18.52■□□□□ 0.55
MYD88-201ENST00000396334 NPC1L1Q9UHC9 1359 aa18.51■□□□□ 0.55
MYD88-201ENST00000396334 SLFN5Q08AF3 891 aa18.51■□□□□ 0.55
MYD88-201ENST00000396334 EIF3AQ14152 1382 aaKnown RBP18.51■□□□□ 0.55
MYD88-201ENST00000396334 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.5■□□□□ 0.55
MYD88-201ENST00000396334 CEP152O94986 1710 aa18.5■□□□□ 0.55
MYD88-201ENST00000396334 WDR43Q15061 677 aaKnown RBP eCLIP18.49■□□□□ 0.55
MYD88-201ENST00000396334 KNSTRNQ9Y448 316 aa18.48■□□□□ 0.55
MYD88-201ENST00000396334 SCAPERQ9BY12 1400 aa18.48■□□□□ 0.55
MYD88-201ENST00000396334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.55
MYD88-201ENST00000396334 SCAF11Q99590 1463 aaKnown RBP18.47■□□□□ 0.55
MYD88-201ENST00000396334 DAXXQ9UER7 740 aaPredicted RBP18.46■□□□□ 0.55
MYD88-201ENST00000396334 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
MYD88-201ENST00000396334 TRPM2O94759 1503 aa18.46■□□□□ 0.55
MYD88-201ENST00000396334 KIAA1210Q9ULL0 1709 aa18.45■□□□□ 0.54
MYD88-201ENST00000396334 KDM5AP29375 1690 aaKnown RBP18.44■□□□□ 0.54
MYD88-201ENST00000396334 CDCA8Q53HL2 280 aa18.43■□□□□ 0.54
MYD88-201ENST00000396334 RRAGDQ9NQL2 400 aaPredicted RBP18.42■□□□□ 0.54
MYD88-201ENST00000396334 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
MYD88-201ENST00000396334 CLTCL1P53675 1640 aa18.41■□□□□ 0.54
MYD88-201ENST00000396334 USP19O94966 1318 aa18.4■□□□□ 0.54
MYD88-201ENST00000396334 PTPRTO14522 1441 aa18.4■□□□□ 0.54
MYD88-201ENST00000396334 STAC3Q96MF2 364 aa18.4■□□□□ 0.54
MYD88-201ENST00000396334 SHROOM2Q13796 1616 aa18.39■□□□□ 0.54
MYD88-201ENST00000396334 NEURL4Q96JN8 1562 aa18.39■□□□□ 0.53
MYD88-201ENST00000396334 DEPDC5O75140 1603 aa18.38■□□□□ 0.53
MYD88-201ENST00000396334 ABCC1P33527 1531 aa18.38■□□□□ 0.53
MYD88-201ENST00000396334 RGS3P49796 1198 aa18.38■□□□□ 0.53
MYD88-201ENST00000396334 NINLQ9Y2I6 1382 aa18.37■□□□□ 0.53
MYD88-201ENST00000396334 E9PSI1 815 aa18.37■□□□□ 0.53
MYD88-201ENST00000396334 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
MYD88-201ENST00000396334 POGKQ9P215 609 aa18.37■□□□□ 0.53
MYD88-201ENST00000396334 NLRP1Q9C000 1473 aa18.36■□□□□ 0.53
MYD88-201ENST00000396334 BCAR3O75815 825 aa18.36■□□□□ 0.53
MYD88-201ENST00000396334 IGHDP01880 384 aa18.35■□□□□ 0.53
MYD88-201ENST00000396334 CCDC146Q8IYE0 955 aa18.35■□□□□ 0.53
MYD88-201ENST00000396334 TET3O43151 1660 aa18.35■□□□□ 0.53
MYD88-201ENST00000396334 APAF1O14727 1248 aa18.35■□□□□ 0.53
MYD88-201ENST00000396334 PLCH2O75038 1416 aa18.34■□□□□ 0.53
MYD88-201ENST00000396334 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
MYD88-201ENST00000396334 VSIG10Q8N0Z9 540 aa18.34■□□□□ 0.53
MYD88-201ENST00000396334 ZMYND15Q9H091 742 aa18.34■□□□□ 0.53
MYD88-201ENST00000396334 CGNL1Q0VF96 1302 aa18.34■□□□□ 0.53
MYD88-201ENST00000396334 ERVK-7P63135 1459 aa18.33■□□□□ 0.52
MYD88-201ENST00000396334 SHPRHQ149N8 1683 aa18.32■□□□□ 0.52
MYD88-201ENST00000396334 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
MYD88-201ENST00000396334 MYO3AQ8NEV4 1616 aa18.31■□□□□ 0.52
MYD88-201ENST00000396334 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
MYD88-201ENST00000396334 VWDEQ8N2E2 1590 aa18.31■□□□□ 0.52
MYD88-201ENST00000396334 TRAPPC8Q9Y2L5 1435 aa18.3■□□□□ 0.52
MYD88-201ENST00000396334 ZMYM3Q14202 1370 aa18.3■□□□□ 0.52
MYD88-201ENST00000396334 ABCA6Q8N139 1617 aa18.3■□□□□ 0.52
MYD88-201ENST00000396334 MAP3K4Q9Y6R4 1608 aa18.3■□□□□ 0.52
MYD88-201ENST00000396334 CHD1O14646 1710 aa18.3■□□□□ 0.52
MYD88-201ENST00000396334 ZFYVE16Q7Z3T8 1539 aa18.29■□□□□ 0.52
MYD88-201ENST00000396334 RTEL1-TNFRSF6BF6WH68 1400 aa18.29■□□□□ 0.52
MYD88-201ENST00000396334 IFT172Q9UG01 1749 aa18.29■□□□□ 0.52
MYD88-201ENST00000396334 MYOM2P54296 1465 aa18.29■□□□□ 0.52
MYD88-201ENST00000396334 POLR3AO14802 1390 aaPredicted RBP18.29■□□□□ 0.52
MYD88-201ENST00000396334 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
MYD88-201ENST00000396334 GLIPR1L2Q4G1C9 344 aa18.27■□□□□ 0.52
MYD88-201ENST00000396334 SEC24BO95487 1268 aa18.27■□□□□ 0.51
MYD88-201ENST00000396334 CENPJQ9HC77 1338 aaPredicted RBP18.26■□□□□ 0.51
MYD88-201ENST00000396334 IQSEC2Q5JU85 1478 aa18.26■□□□□ 0.51
MYD88-201ENST00000396334 CARD14Q9BXL6 1004 aa18.26■□□□□ 0.51
MYD88-201ENST00000396334 ZCCHC11Q5TAX3 1644 aaKnown RBP18.26■□□□□ 0.51
MYD88-201ENST00000396334 ARXQ96QS3 562 aa18.25■□□□□ 0.51
MYD88-201ENST00000396334 SLC24A1O60721 1099 aa18.25■□□□□ 0.51
MYD88-201ENST00000396334 AAMPQ13685 434 aa18.24■□□□□ 0.51
MYD88-201ENST00000396334 WWC1Q8IX03 1113 aa18.24■□□□□ 0.51
MYD88-201ENST00000396334 ARAP3Q8WWN8 1544 aa18.24■□□□□ 0.51
MYD88-201ENST00000396334 EFCAB2Q5VUJ9 269 aa18.24■□□□□ 0.51
MYD88-201ENST00000396334 ERCC6L2Q5T890 1561 aa18.23■□□□□ 0.51
MYD88-201ENST00000396334 NAP1L5Q96NT1 182 aaPredicted RBP18.23■□□□□ 0.51
MYD88-201ENST00000396334 PANK1Q8TE04 598 aa18.23■□□□□ 0.51
MYD88-201ENST00000396334 ANTXR1Q9H6X2 564 aa18.23■□□□□ 0.51
MYD88-201ENST00000396334 BECN1Q14457 450 aa18.22■□□□□ 0.51
MYD88-201ENST00000396334 SBNO2Q9Y2G9 1366 aa18.22■□□□□ 0.51
MYD88-201ENST00000396334 COG6Q9Y2V7 657 aa18.22■□□□□ 0.51
MYD88-201ENST00000396334 NRXN1Q9ULB1 1477 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms