RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 RALGAPBQ86X10 1494 aa34.69■■■■□ 3.14
CTF1-202ENST00000395019 EIF4G2P78344 907 aaKnown RBP eCLIP34.69■■■■□ 3.14
CTF1-202ENST00000395019 ZNF326Q5BKZ1 582 aaKnown RBP34.69■■■■□ 3.14
CTF1-202ENST00000395019 STAG3Q9UJ98 1225 aa34.69■■■■□ 3.14
CTF1-202ENST00000395019 PPLO60437 1756 aa34.67■■■■□ 3.14
CTF1-202ENST00000395019 PRAG1Q86YV5 1406 aa34.66■■■■□ 3.14
CTF1-202ENST00000395019 HSPA5P11021 654 aaKnown RBP34.65■■■■□ 3.14
CTF1-202ENST00000395019 HIRIP3Q9BW71 556 aaPredicted RBP34.65■■■■□ 3.14
CTF1-202ENST00000395019 NEXMIFQ5QGS0 1516 aa34.64■■■■□ 3.14
CTF1-202ENST00000395019 STAC3Q96MF2 364 aa34.62■■■■□ 3.13
CTF1-202ENST00000395019 ZFYVE9O95405 1425 aa34.59■■■■□ 3.13
CTF1-202ENST00000395019 SLIT1O75093 1534 aa34.58■■■■□ 3.13
CTF1-202ENST00000395019 TMEM2Q9UHN6 1383 aa34.58■■■■□ 3.13
CTF1-202ENST00000395019 HSPA2P54652 639 aa34.58■■■■□ 3.13
CTF1-202ENST00000395019 NUTM2DQ5VT03 806 aaPredicted RBP34.58■■■■□ 3.13
CTF1-202ENST00000395019 ARHGAP23Q9P227 1491 aa34.58■■■■□ 3.13
CTF1-202ENST00000395019 THEMISQ8N1K5 641 aaPredicted RBP34.56■■■■□ 3.12
CTF1-202ENST00000395019 RIMS2Q9UQ26 1411 aa34.56■■■■□ 3.12
CTF1-202ENST00000395019 TRPM1Q7Z4N2 1603 aa34.55■■■■□ 3.12
CTF1-202ENST00000395019 POLR1AO95602 1720 aaPredicted RBP34.52■■■■□ 3.12
CTF1-202ENST00000395019 LTKP29376 864 aa34.5■■■■□ 3.11
CTF1-202ENST00000395019 USP47Q96K76 1375 aa34.49■■■■□ 3.11
CTF1-202ENST00000395019 AEBP2Q6ZN18 517 aaPredicted RBP34.48■■■■□ 3.11
CTF1-202ENST00000395019 CARD11Q9BXL7 1154 aa34.48■■■■□ 3.11
CTF1-202ENST00000395019 ROCK2O75116 1388 aaKnown RBP34.48■■■■□ 3.11
CTF1-202ENST00000395019 SENP3Q9H4L4 574 aaPredicted RBP34.48■■■■□ 3.11
CTF1-202ENST00000395019 GPRASP1Q5JY77 1395 aa34.47■■■■□ 3.11
CTF1-202ENST00000395019 STRCQ7RTU9 1775 aa34.47■■■■□ 3.11
CTF1-202ENST00000395019 RPGRIP1LQ68CZ1 1315 aa34.47■■■■□ 3.11
CTF1-202ENST00000395019 MYOM2P54296 1465 aa34.45■■■■□ 3.1
CTF1-202ENST00000395019 ADGRF5Q8IZF2 1346 aa34.44■■■■□ 3.1
CTF1-202ENST00000395019 SCAF11Q99590 1463 aaKnown RBP34.44■■■■□ 3.1
CTF1-202ENST00000395019 TXNDC2Q86VQ3 553 aa34.44■■■■□ 3.1
CTF1-202ENST00000395019 LAMC1P11047 1609 aa34.43■■■■□ 3.1
CTF1-202ENST00000395019 IQGAP1P46940 1657 aa34.41■■■■□ 3.1
CTF1-202ENST00000395019 NRXN3Q9Y4C0 1643 aa34.41■■■■□ 3.1
CTF1-202ENST00000395019 NCKAP5LQ9HCH0 1330 aa34.41■■■■□ 3.1
CTF1-202ENST00000395019 NRXN1Q9ULB1 1477 aa34.4■■■■□ 3.1
CTF1-202ENST00000395019 DDX10Q13206 875 aaKnown RBP34.4■■■■□ 3.1
CTF1-202ENST00000395019 NBPF1Q3BBV0 1214 aa34.38■■■■□ 3.09
CTF1-202ENST00000395019 ANKLE2Q86XL3 938 aa34.37■■■■□ 3.09
CTF1-202ENST00000395019 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.37■■■■□ 3.09
CTF1-202ENST00000395019 EID1Q9Y6B2 187 aa34.37■■■■□ 3.09
CTF1-202ENST00000395019 WASHC2AQ641Q2 1341 aa34.36■■■■□ 3.09
CTF1-202ENST00000395019 MIER1Q8N108 512 aa34.36■■■■□ 3.09
CTF1-202ENST00000395019 VGFO15240 615 aaPredicted RBP34.35■■■■□ 3.09
CTF1-202ENST00000395019 PIK3C2GO75747 1445 aa34.34■■■■□ 3.09
CTF1-202ENST00000395019 SETD1AO15047 1707 aaKnown RBP34.33■■■■□ 3.09
CTF1-202ENST00000395019 SETBP1Q9Y6X0 1596 aa34.32■■■■□ 3.09
CTF1-202ENST00000395019 KIAA1210Q9ULL0 1709 aa34.32■■■■□ 3.08
CTF1-202ENST00000395019 PLEKHG1Q9ULL1 1385 aa34.32■■■■□ 3.08
CTF1-202ENST00000395019 HDGFP51858 240 aaKnown RBP34.31■■■■□ 3.08
CTF1-202ENST00000395019 MED14O60244 1454 aa34.3■■■■□ 3.08
CTF1-202ENST00000395019 CCDC7Q96M83 1385 aa34.3■■■■□ 3.08
CTF1-202ENST00000395019 C11orf95C9JLR9 678 aaPredicted RBP34.3■■■■□ 3.08
CTF1-202ENST00000395019 NPHP4O75161 1426 aaPredicted RBP34.28■■■■□ 3.08
CTF1-202ENST00000395019 ALKQ9UM73 1620 aa34.27■■■■□ 3.08
CTF1-202ENST00000395019 ADAMTS13Q76LX8 1427 aa34.27■■■■□ 3.08
CTF1-202ENST00000395019 ST20-MTHFSA0A0A6YYL1 179 aa34.25■■■■□ 3.07
CTF1-202ENST00000395019 CFAP70Q5T0N1 1121 aa34.22■■■■□ 3.07
CTF1-202ENST00000395019 BCANQ96GW7 911 aa34.22■■■■□ 3.07
CTF1-202ENST00000395019 KIF7Q2M1P5 1343 aa34.22■■■■□ 3.07
CTF1-202ENST00000395019 SLC26A8Q96RN1 970 aa34.22■■■■□ 3.07
CTF1-202ENST00000395019 ASXL1Q8IXJ9 1541 aa34.22■■■■□ 3.07
CTF1-202ENST00000395019 C14orf93Q9H972 538 aaKnown RBP34.17■■■■□ 3.06
CTF1-202ENST00000395019 DIP2AQ14689 1571 aa34.16■■■■□ 3.06
CTF1-202ENST00000395019 METP08581 1390 aa34.14■■■■□ 3.06
CTF1-202ENST00000395019 ADGRB1O14514 1584 aa34.14■■■■□ 3.06
CTF1-202ENST00000395019 TMEM132EQ6IEE7 984 aa34.12■■■■□ 3.05
CTF1-202ENST00000395019 CHD2O14647 1828 aaKnown RBP34.08■■■■□ 3.05
CTF1-202ENST00000395019 TBX22Q9Y458 520 aa34.08■■■■□ 3.05
CTF1-202ENST00000395019 TESK2Q96S53 571 aa34.08■■■■□ 3.05
CTF1-202ENST00000395019 PTPRUQ92729 1446 aa34.07■■■■□ 3.04
CTF1-202ENST00000395019 STRCP1A6NGW2 1772 aa34.06■■■■□ 3.04
CTF1-202ENST00000395019 EIF3AQ14152 1382 aaKnown RBP34.04■■■■□ 3.04
CTF1-202ENST00000395019 XRN1Q8IZH2 1706 aaKnown RBP34.01■■■■□ 3.04
CTF1-202ENST00000395019 ANP32CO43423 234 aa34.01■■■■□ 3.03
CTF1-202ENST00000395019 YTHDC2Q9H6S0 1430 aaKnown RBP33.99■■■■□ 3.03
CTF1-202ENST00000395019 KNDC1Q76NI1 1749 aa33.98■■■■□ 3.03
CTF1-202ENST00000395019 ARHGEF28Q8N1W1 1705 aaKnown RBP33.97■■■■□ 3.03
CTF1-202ENST00000395019 NWD1Q149M9 1564 aa33.97■■■■□ 3.03
CTF1-202ENST00000395019 STK26Q9P289 416 aa33.97■■■■□ 3.03
CTF1-202ENST00000395019 TMF1P82094 1093 aa33.96■■■■□ 3.03
CTF1-202ENST00000395019 DMRT2Q9Y5R5 561 aa33.96■■■■□ 3.03
CTF1-202ENST00000395019 POLR3GLQ9BT43 218 aa33.95■■■■□ 3.03
CTF1-202ENST00000395019 PIK3R4Q99570 1358 aa33.94■■■■□ 3.02
CTF1-202ENST00000395019 LRPPRCP42704 1394 aaKnown RBP33.93■■■■□ 3.02
CTF1-202ENST00000395019 DISP3Q9P2K9 1392 aa33.93■■■■□ 3.02
CTF1-202ENST00000395019 AMOTL2Q9Y2J4 779 aa33.92■■■■□ 3.02
CTF1-202ENST00000395019 ZNF335Q9H4Z2 1342 aaPredicted RBP33.91■■■■□ 3.02
CTF1-202ENST00000395019 TRAK1Q9UPV9 953 aa33.91■■■■□ 3.02
CTF1-202ENST00000395019 SLC24A1O60721 1099 aa33.9■■■■□ 3.02
CTF1-202ENST00000395019 CPS1P31327 1500 aa33.9■■■■□ 3.02
CTF1-202ENST00000395019 KCNA6P17658 529 aa33.89■■■■□ 3.02
CTF1-202ENST00000395019 ABCC11Q96J66 1382 aa33.87■■■■□ 3.01
CTF1-202ENST00000395019 TECPR2O15040 1411 aa33.87■■■■□ 3.01
CTF1-202ENST00000395019 ROBO2Q9HCK4 1378 aa33.87■■■■□ 3.01
CTF1-202ENST00000395019 SBNO2Q9Y2G9 1366 aa33.85■■■■□ 3.01
CTF1-202ENST00000395019 DLC1Q96QB1 1528 aa33.84■■■■□ 3.01
CTF1-202ENST00000395019 CCER2I3L3R5 266 aa33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms