RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 COG6Q9Y2V7 657 aa21.14■□□□□ 0.98
EFEMP1-202ENST00000394555 CARMIL2Q6F5E8 1435 aa21.14■□□□□ 0.97
EFEMP1-202ENST00000394555 PANK1Q8TE04 598 aa21.13■□□□□ 0.97
EFEMP1-202ENST00000394555 DMRT2Q9Y5R5 561 aa21.13■□□□□ 0.97
EFEMP1-202ENST00000394555 ATP10BO94823 1461 aa21.11■□□□□ 0.97
EFEMP1-202ENST00000394555 IFT140Q96RY7 1462 aa21.11■□□□□ 0.97
EFEMP1-202ENST00000394555 EIF3AQ14152 1382 aaKnown RBP21.11■□□□□ 0.97
EFEMP1-202ENST00000394555 SPRYD3Q8NCJ5 442 aa21.1■□□□□ 0.97
EFEMP1-202ENST00000394555 TRMT2AQ8IZ69 625 aaKnown RBP21.1■□□□□ 0.97
EFEMP1-202ENST00000394555 NKTRP30414 1462 aaKnown RBP21.09■□□□□ 0.97
EFEMP1-202ENST00000394555 WDR7Q9Y4E6 1490 aa21.09■□□□□ 0.97
EFEMP1-202ENST00000394555 E9PSI1 815 aa21.08■□□□□ 0.96
EFEMP1-202ENST00000394555 CLUAP1Q96AJ1 413 aa21.08■□□□□ 0.96
EFEMP1-202ENST00000394555 CCDC141Q6ZP82 1450 aa21.08■□□□□ 0.96
EFEMP1-202ENST00000394555 NEUROD2Q15784 382 aa21.07■□□□□ 0.96
EFEMP1-202ENST00000394555 RRAGDQ9NQL2 400 aaPredicted RBP21.07■□□□□ 0.96
EFEMP1-202ENST00000394555 CGNL1Q0VF96 1302 aa21.05■□□□□ 0.96
EFEMP1-202ENST00000394555 MAPK8IP3Q9UPT6 1336 aa21.05■□□□□ 0.96
EFEMP1-202ENST00000394555 CENPJQ9HC77 1338 aaPredicted RBP21.05■□□□□ 0.96
EFEMP1-202ENST00000394555 GZF1Q9H116 711 aaPredicted RBP21.04■□□□□ 0.96
EFEMP1-202ENST00000394555 UPF2Q9HAU5 1272 aaKnown RBP21.04■□□□□ 0.96
EFEMP1-202ENST00000394555 CDCA8Q53HL2 280 aa21.03■□□□□ 0.96
EFEMP1-202ENST00000394555 L1TD1Q5T7N2 865 aaKnown RBP21.02■□□□□ 0.96
EFEMP1-202ENST00000394555 PDE3AQ14432 1141 aa21.02■□□□□ 0.95
EFEMP1-202ENST00000394555 RSPH4AQ5TD94 716 aa21.02■□□□□ 0.95
EFEMP1-202ENST00000394555 MYO5CQ9NQX4 1742 aa21.01■□□□□ 0.95
EFEMP1-202ENST00000394555 ARHGEF5Q12774 1597 aa21.01■□□□□ 0.95
EFEMP1-202ENST00000394555 LAMC1P11047 1609 aa21■□□□□ 0.95
EFEMP1-202ENST00000394555 BCL2L13Q9BXK5 485 aa21■□□□□ 0.95
EFEMP1-202ENST00000394555 EIF2AK4Q9P2K8 1649 aaKnown RBP21■□□□□ 0.95
EFEMP1-202ENST00000394555 RRP7AQ9Y3A4 280 aaKnown RBP21■□□□□ 0.95
EFEMP1-202ENST00000394555 ABCA8O94911 1581 aa20.99■□□□□ 0.95
EFEMP1-202ENST00000394555 TBC1D2Q9BYX2 928 aa20.99■□□□□ 0.95
EFEMP1-202ENST00000394555 ANTXR1Q9H6X2 564 aa20.99■□□□□ 0.95
EFEMP1-202ENST00000394555 SAMD9LQ8IVG5 1584 aa20.99■□□□□ 0.95
EFEMP1-202ENST00000394555 TNNQ9UQP3 1299 aa20.99■□□□□ 0.95
EFEMP1-202ENST00000394555 ASXL1Q8IXJ9 1541 aa20.98■□□□□ 0.95
EFEMP1-202ENST00000394555 PIK3C2GO75747 1445 aa20.98■□□□□ 0.95
EFEMP1-202ENST00000394555 SYNJ2O15056 1496 aa20.98■□□□□ 0.95
EFEMP1-202ENST00000394555 NUP160Q12769 1436 aa20.98■□□□□ 0.95
EFEMP1-202ENST00000394555 PCDHB15Q9Y5E8 787 aa20.97■□□□□ 0.95
EFEMP1-202ENST00000394555 TNNT2P45379 298 aaPredicted RBP20.96■□□□□ 0.95
EFEMP1-202ENST00000394555 WWC1Q8IX03 1113 aa20.96■□□□□ 0.95
EFEMP1-202ENST00000394555 SYCP2Q9BX26 1530 aa20.96■□□□□ 0.95
EFEMP1-202ENST00000394555 XRCC6P12956 609 aaKnown RBP eCLIP20.95■□□□□ 0.94
EFEMP1-202ENST00000394555 PDZRN3Q9UPQ7 1066 aa20.95■□□□□ 0.94
EFEMP1-202ENST00000394555 GOLGA6L3A6NEY3 463 aa20.95■□□□□ 0.94
EFEMP1-202ENST00000394555 TBC1D32Q96NH3 1257 aa20.95■□□□□ 0.94
EFEMP1-202ENST00000394555 PANK2Q9BZ23 570 aa20.94■□□□□ 0.94
EFEMP1-202ENST00000394555 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
EFEMP1-202ENST00000394555 RLBP1P12271 317 aa20.94■□□□□ 0.94
EFEMP1-202ENST00000394555 PMFBP1Q8TBY8 1022 aa20.93■□□□□ 0.94
EFEMP1-202ENST00000394555 NAP1L5Q96NT1 182 aaPredicted RBP20.93■□□□□ 0.94
EFEMP1-202ENST00000394555 NLRP1Q9C000 1473 aa20.92■□□□□ 0.94
EFEMP1-202ENST00000394555 VIRMAQ69YN4 1812 aaKnown RBP20.9■□□□□ 0.94
EFEMP1-202ENST00000394555 CDC42BPBQ9Y5S2 1711 aa20.9■□□□□ 0.94
EFEMP1-202ENST00000394555 ARHGAP5Q13017 1502 aa20.9■□□□□ 0.94
EFEMP1-202ENST00000394555 RARSP54136 660 aaKnown RBP20.9■□□□□ 0.94
EFEMP1-202ENST00000394555 CARD14Q9BXL6 1004 aa20.9■□□□□ 0.94
EFEMP1-202ENST00000394555 UNC13BO14795 1591 aa20.9■□□□□ 0.94
EFEMP1-202ENST00000394555 MCM4P33991 863 aa20.89■□□□□ 0.94
EFEMP1-202ENST00000394555 ABCC2Q92887 1545 aa20.89■□□□□ 0.93
EFEMP1-202ENST00000394555 MFAP1P55081 439 aaKnown RBP20.88■□□□□ 0.93
EFEMP1-202ENST00000394555 SCAF11Q99590 1463 aaKnown RBP20.88■□□□□ 0.93
EFEMP1-202ENST00000394555 SYNMO15061 1565 aa20.88■□□□□ 0.93
EFEMP1-202ENST00000394555 PNNQ9H307 717 aaKnown RBP20.88■□□□□ 0.93
EFEMP1-202ENST00000394555 RWDD1Q9H446 243 aaPredicted RBP20.86■□□□□ 0.93
EFEMP1-202ENST00000394555 NINLQ9Y2I6 1382 aa20.86■□□□□ 0.93
EFEMP1-202ENST00000394555 RNF17Q9BXT8 1623 aaKnown RBP20.86■□□□□ 0.93
EFEMP1-202ENST00000394555 IQGAP3Q86VI3 1631 aa20.85■□□□□ 0.93
EFEMP1-202ENST00000394555 NPC1L1Q9UHC9 1359 aa20.85■□□□□ 0.93
EFEMP1-202ENST00000394555 TRAK2O60296 914 aa20.85■□□□□ 0.93
EFEMP1-202ENST00000394555 TCP11L2Q8N4U5 519 aa20.85■□□□□ 0.93
EFEMP1-202ENST00000394555 CFAP70Q5T0N1 1121 aa20.84■□□□□ 0.93
EFEMP1-202ENST00000394555 PREX2Q70Z35 1606 aa20.83■□□□□ 0.93
EFEMP1-202ENST00000394555 NGEFQ8N5V2 710 aa20.83■□□□□ 0.93
EFEMP1-202ENST00000394555 C22orf23Q9BZE7 217 aa20.83■□□□□ 0.93
EFEMP1-202ENST00000394555 ATP10AO60312 1499 aa20.83■□□□□ 0.92
EFEMP1-202ENST00000394555 FSD2A1L4K1 749 aa20.82■□□□□ 0.92
EFEMP1-202ENST00000394555 MORC1Q86VD1 984 aa20.81■□□□□ 0.92
EFEMP1-202ENST00000394555 MADDQ8WXG6 1647 aa20.81■□□□□ 0.92
EFEMP1-202ENST00000394555 IQGAP1P46940 1657 aa20.81■□□□□ 0.92
EFEMP1-202ENST00000394555 CHMP5Q9NZZ3 219 aa20.81■□□□□ 0.92
EFEMP1-202ENST00000394555 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
EFEMP1-202ENST00000394555 RUNDC1Q96C34 613 aa20.8■□□□□ 0.92
EFEMP1-202ENST00000394555 MAST1Q9Y2H9 1570 aa20.78■□□□□ 0.92
EFEMP1-202ENST00000394555 MYOM1P52179 1685 aa20.78■□□□□ 0.92
EFEMP1-202ENST00000394555 DUOX2Q9NRD8 1548 aa20.77■□□□□ 0.92
EFEMP1-202ENST00000394555 CLCN1P35523 988 aa20.77■□□□□ 0.91
EFEMP1-202ENST00000394555 ERCC6Q03468 1493 aa20.76■□□□□ 0.91
EFEMP1-202ENST00000394555 TTC37Q6PGP7 1564 aa20.76■□□□□ 0.91
EFEMP1-202ENST00000394555 MRE11P49959 708 aa20.75■□□□□ 0.91
EFEMP1-202ENST00000394555 AAMPQ13685 434 aa20.75■□□□□ 0.91
EFEMP1-202ENST00000394555 MVPQ14764 893 aaKnown RBP20.75■□□□□ 0.91
EFEMP1-202ENST00000394555 HSCBQ8IWL3 235 aa20.75■□□□□ 0.91
EFEMP1-202ENST00000394555 MYH16Q9H6N6 1097 aa20.75■□□□□ 0.91
EFEMP1-202ENST00000394555 POLR3AO14802 1390 aaPredicted RBP20.74■□□□□ 0.91
EFEMP1-202ENST00000394555 HSP90AA1P07900 732 aaKnown RBP20.74■□□□□ 0.91
EFEMP1-202ENST00000394555 SCAPERQ9BY12 1400 aa20.74■□□□□ 0.91
EFEMP1-202ENST00000394555 KDM5AP29375 1690 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms