RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
GAPVD1-205ENST00000394084 SCAF11Q99590 1463 aaKnown RBP18.32■□□□□ 0.52
GAPVD1-205ENST00000394084 GOLGA2Q08379 1002 aa18.31■□□□□ 0.52
GAPVD1-205ENST00000394084 IQGAP1P46940 1657 aa18.31■□□□□ 0.52
GAPVD1-205ENST00000394084 KIF3BO15066 747 aa18.3■□□□□ 0.52
GAPVD1-205ENST00000394084 TRPM2O94759 1503 aa18.29■□□□□ 0.52
GAPVD1-205ENST00000394084 CLTCL1P53675 1640 aa18.29■□□□□ 0.52
GAPVD1-205ENST00000394084 CFAP70Q5T0N1 1121 aa18.29■□□□□ 0.52
GAPVD1-205ENST00000394084 ASXL1Q8IXJ9 1541 aa18.27■□□□□ 0.52
GAPVD1-205ENST00000394084 SPHKAPQ2M3C7 1700 aa18.27■□□□□ 0.52
GAPVD1-205ENST00000394084 ZFYVE16Q7Z3T8 1539 aa18.26■□□□□ 0.51
GAPVD1-205ENST00000394084 ZNF521Q96K83 1311 aa18.26■□□□□ 0.51
GAPVD1-205ENST00000394084 SYNMO15061 1565 aa18.26■□□□□ 0.51
GAPVD1-205ENST00000394084 PTPRTO14522 1441 aa18.26■□□□□ 0.51
GAPVD1-205ENST00000394084 APAF1O14727 1248 aa18.26■□□□□ 0.51
GAPVD1-205ENST00000394084 KANK1Q14678 1352 aa18.25■□□□□ 0.51
GAPVD1-205ENST00000394084 SCAPERQ9BY12 1400 aa18.25■□□□□ 0.51
GAPVD1-205ENST00000394084 CEP152O94986 1710 aa18.25■□□□□ 0.51
GAPVD1-205ENST00000394084 SPINK5Q9NQ38 1064 aaPredicted RBP18.25■□□□□ 0.51
GAPVD1-205ENST00000394084 EIF3AQ14152 1382 aaKnown RBP18.25■□□□□ 0.51
GAPVD1-205ENST00000394084 SLFN5Q08AF3 891 aa18.24■□□□□ 0.51
GAPVD1-205ENST00000394084 RTEL1-TNFRSF6BF6WH68 1400 aa18.24■□□□□ 0.51
GAPVD1-205ENST00000394084 ADGRF5Q8IZF2 1346 aa18.24■□□□□ 0.51
GAPVD1-205ENST00000394084 KDM2BQ8NHM5 1336 aa18.24■□□□□ 0.51
GAPVD1-205ENST00000394084 UGGT1Q9NYU2 1555 aa18.23■□□□□ 0.51
GAPVD1-205ENST00000394084 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
GAPVD1-205ENST00000394084 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.22■□□□□ 0.51
GAPVD1-205ENST00000394084 NEFMP07197 916 aa18.22■□□□□ 0.51
GAPVD1-205ENST00000394084 STAC3Q96MF2 364 aa18.22■□□□□ 0.51
GAPVD1-205ENST00000394084 UHRF1BP1LA0JNW5 1464 aa18.21■□□□□ 0.51
GAPVD1-205ENST00000394084 MYOM1P52179 1685 aa18.21■□□□□ 0.51
GAPVD1-205ENST00000394084 CENPQQ7L2Z9 268 aaPredicted RBP18.21■□□□□ 0.51
GAPVD1-205ENST00000394084 CARD14Q9BXL6 1004 aa18.2■□□□□ 0.5
GAPVD1-205ENST00000394084 BCAR3O75815 825 aa18.2■□□□□ 0.5
GAPVD1-205ENST00000394084 CHGAP10645 457 aaKnown RBP18.2■□□□□ 0.5
GAPVD1-205ENST00000394084 RGS3P49796 1198 aa18.2■□□□□ 0.5
GAPVD1-205ENST00000394084 TET3O43151 1660 aa18.19■□□□□ 0.5
GAPVD1-205ENST00000394084 SLC4A3P48751 1232 aa18.19■□□□□ 0.5
GAPVD1-205ENST00000394084 DMRT2Q9Y5R5 561 aa18.19■□□□□ 0.5
GAPVD1-205ENST00000394084 ATP7AQ04656 1500 aa18.19■□□□□ 0.5
GAPVD1-205ENST00000394084 FANCAO15360 1455 aa18.19■□□□□ 0.5
GAPVD1-205ENST00000394084 KDM5AP29375 1690 aaKnown RBP18.18■□□□□ 0.5
GAPVD1-205ENST00000394084 ERVK-7P63135 1459 aa18.17■□□□□ 0.5
GAPVD1-205ENST00000394084 DEPDC5O75140 1603 aa18.17■□□□□ 0.5
GAPVD1-205ENST00000394084 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
GAPVD1-205ENST00000394084 TNNT2P45379 298 aaPredicted RBP18.17■□□□□ 0.5
GAPVD1-205ENST00000394084 CLASP1Q7Z460 1538 aa18.16■□□□□ 0.5
GAPVD1-205ENST00000394084 DDRGK1Q96HY6 314 aa18.16■□□□□ 0.5
GAPVD1-205ENST00000394084 TRMT2AQ8IZ69 625 aaKnown RBP18.15■□□□□ 0.5
GAPVD1-205ENST00000394084 ADGRL1O94910 1474 aa18.14■□□□□ 0.5
GAPVD1-205ENST00000394084 ABCA6Q8N139 1617 aa18.14■□□□□ 0.49
GAPVD1-205ENST00000394084 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
GAPVD1-205ENST00000394084 NKTRP30414 1462 aaKnown RBP18.13■□□□□ 0.49
GAPVD1-205ENST00000394084 TRAK1Q9UPV9 953 aa18.13■□□□□ 0.49
GAPVD1-205ENST00000394084 E9PSI1 815 aa18.13■□□□□ 0.49
GAPVD1-205ENST00000394084 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
GAPVD1-205ENST00000394084 MAP3K4Q9Y6R4 1608 aa18.12■□□□□ 0.49
GAPVD1-205ENST00000394084 INO80Q9ULG1 1556 aaPredicted RBP18.12■□□□□ 0.49
GAPVD1-205ENST00000394084 ARAP3Q8WWN8 1544 aa18.12■□□□□ 0.49
GAPVD1-205ENST00000394084 PPM1GO15355 546 aaPredicted RBP18.12■□□□□ 0.49
GAPVD1-205ENST00000394084 C8orf34Q49A92 452 aa18.12■□□□□ 0.49
GAPVD1-205ENST00000394084 VWDEQ8N2E2 1590 aa18.12■□□□□ 0.49
GAPVD1-205ENST00000394084 RRP7AQ9Y3A4 280 aaKnown RBP18.11■□□□□ 0.49
GAPVD1-205ENST00000394084 DAXXQ9UER7 740 aaPredicted RBP18.1■□□□□ 0.49
GAPVD1-205ENST00000394084 KIAA1210Q9ULL0 1709 aa18.1■□□□□ 0.49
GAPVD1-205ENST00000394084 CANXP27824 592 aaKnown RBP18.1■□□□□ 0.49
GAPVD1-205ENST00000394084 CENPJQ9HC77 1338 aaPredicted RBP18.09■□□□□ 0.49
GAPVD1-205ENST00000394084 NOS1P29475 1434 aa18.09■□□□□ 0.49
GAPVD1-205ENST00000394084 MROH1Q8NDA8 1641 aa18.09■□□□□ 0.49
GAPVD1-205ENST00000394084 MYOM2P54296 1465 aa18.09■□□□□ 0.49
GAPVD1-205ENST00000394084 MORC1Q86VD1 984 aa18.09■□□□□ 0.49
GAPVD1-205ENST00000394084 SLC12A5Q9H2X9 1139 aa18.09■□□□□ 0.49
GAPVD1-205ENST00000394084 TMEM132EQ6IEE7 984 aa18.08■□□□□ 0.49
GAPVD1-205ENST00000394084 ABCA9Q8IUA7 1624 aa18.08■□□□□ 0.48
GAPVD1-205ENST00000394084 SLC24A1O60721 1099 aa18.08■□□□□ 0.48
GAPVD1-205ENST00000394084 PANK1Q8TE04 598 aa18.07■□□□□ 0.48
GAPVD1-205ENST00000394084 IGHDP01880 384 aa18.07■□□□□ 0.48
GAPVD1-205ENST00000394084 WWC1Q8IX03 1113 aa18.07■□□□□ 0.48
GAPVD1-205ENST00000394084 KIF1BO60333 1816 aa18.07■□□□□ 0.48
GAPVD1-205ENST00000394084 FRAT1Q92837 279 aaPredicted RBP18.07■□□□□ 0.48
GAPVD1-205ENST00000394084 USP35Q9P2H5 1018 aa18.07■□□□□ 0.48
GAPVD1-205ENST00000394084 COG6Q9Y2V7 657 aa18.07■□□□□ 0.48
GAPVD1-205ENST00000394084 NSD3Q9BZ95 1437 aa18.07■□□□□ 0.48
GAPVD1-205ENST00000394084 MROH2AA6NES4 1674 aa18.07■□□□□ 0.48
GAPVD1-205ENST00000394084 GGT6Q6P531 493 aa18.06■□□□□ 0.48
GAPVD1-205ENST00000394084 EFCAB6Q5THR3 1501 aa18.05■□□□□ 0.48
GAPVD1-205ENST00000394084 CFAP65Q6ZU64 1925 aaKnown RBP18.05■□□□□ 0.48
GAPVD1-205ENST00000394084 NUTM2DQ5VT03 806 aaPredicted RBP18.05■□□□□ 0.48
GAPVD1-205ENST00000394084 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
GAPVD1-205ENST00000394084 PPRC1Q5VV67 1664 aaKnown RBP18.03■□□□□ 0.48
GAPVD1-205ENST00000394084 POLR3AO14802 1390 aaPredicted RBP18.03■□□□□ 0.48
GAPVD1-205ENST00000394084 NFKBIBQ15653 356 aa18.02■□□□□ 0.48
GAPVD1-205ENST00000394084 ASXL2Q76L83 1435 aa18.02■□□□□ 0.47
GAPVD1-205ENST00000394084 TCP11L2Q8N4U5 519 aa18.01■□□□□ 0.47
GAPVD1-205ENST00000394084 BCL2L13Q9BXK5 485 aa18.01■□□□□ 0.47
GAPVD1-205ENST00000394084 NEURL4Q96JN8 1562 aa18.01■□□□□ 0.47
GAPVD1-205ENST00000394084 CGNL1Q0VF96 1302 aa18.01■□□□□ 0.47
GAPVD1-205ENST00000394084 CLUAP1Q96AJ1 413 aa18■□□□□ 0.47
GAPVD1-205ENST00000394084 IFT172Q9UG01 1749 aa18■□□□□ 0.47
GAPVD1-205ENST00000394084 TNNQ9UQP3 1299 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms