RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 ARHGEF12Q9NZN5 1544 aa24.4■■□□□ 1.5
SMARCC2-203ENST00000394023 FAM69CQ0P6D2 419 aa24.4■■□□□ 1.5
SMARCC2-203ENST00000394023 TCERG1O14776 1098 aaKnown RBP24.38■■□□□ 1.49
SMARCC2-203ENST00000394023 CLUAP1Q96AJ1 413 aa24.38■■□□□ 1.49
SMARCC2-203ENST00000394023 FANCIQ9NVI1 1328 aa24.38■■□□□ 1.49
SMARCC2-203ENST00000394023 TTC37Q6PGP7 1564 aa24.37■■□□□ 1.49
SMARCC2-203ENST00000394023 CD109Q6YHK3 1445 aa24.36■■□□□ 1.49
SMARCC2-203ENST00000394023 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.35■■□□□ 1.49
SMARCC2-203ENST00000394023 EVC2Q86UK5 1308 aa24.35■■□□□ 1.49
SMARCC2-203ENST00000394023 FTSJ3Q8IY81 847 aaKnown RBP24.35■■□□□ 1.49
SMARCC2-203ENST00000394023 ASXL2Q76L83 1435 aa24.34■■□□□ 1.49
SMARCC2-203ENST00000394023 SKAP1Q86WV1 359 aa24.34■■□□□ 1.49
SMARCC2-203ENST00000394023 CHD1O14646 1710 aa24.33■■□□□ 1.49
SMARCC2-203ENST00000394023 CGNL1Q0VF96 1302 aa24.33■■□□□ 1.49
SMARCC2-203ENST00000394023 SOX12O15370 315 aa24.33■■□□□ 1.49
SMARCC2-203ENST00000394023 PDE4AP27815 886 aa24.33■■□□□ 1.49
SMARCC2-203ENST00000394023 ARHGEF5Q12774 1597 aa24.33■■□□□ 1.48
SMARCC2-203ENST00000394023 MSH5O43196 834 aa24.32■■□□□ 1.48
SMARCC2-203ENST00000394023 MTHFSP49914 203 aa24.32■■□□□ 1.48
SMARCC2-203ENST00000394023 GGNBP2Q9H3C7 697 aa24.31■■□□□ 1.48
SMARCC2-203ENST00000394023 PARD3Q8TEW0 1356 aa24.31■■□□□ 1.48
SMARCC2-203ENST00000394023 HDGFL2Q7Z4V5 671 aaPredicted RBP24.3■■□□□ 1.48
SMARCC2-203ENST00000394023 WDR7Q9Y4E6 1490 aa24.3■■□□□ 1.48
SMARCC2-203ENST00000394023 PLEKHG5O94827 1062 aa24.3■■□□□ 1.48
SMARCC2-203ENST00000394023 PLA2R1Q13018 1463 aa24.29■■□□□ 1.48
SMARCC2-203ENST00000394023 C20orf194Q5TEA3 1177 aa24.29■■□□□ 1.48
SMARCC2-203ENST00000394023 IPO9Q96P70 1041 aaKnown RBP24.29■■□□□ 1.48
SMARCC2-203ENST00000394023 ADCY10Q96PN6 1610 aa24.29■■□□□ 1.48
SMARCC2-203ENST00000394023 NUTM2FA1L443 756 aa24.29■■□□□ 1.48
SMARCC2-203ENST00000394023 E9PSI1 815 aa24.28■■□□□ 1.48
SMARCC2-203ENST00000394023 AMER1Q5JTC6 1135 aaPredicted RBP24.28■■□□□ 1.48
SMARCC2-203ENST00000394023 TERF2IPQ9NYB0 399 aa24.28■■□□□ 1.48
SMARCC2-203ENST00000394023 COG6Q9Y2V7 657 aa24.28■■□□□ 1.48
SMARCC2-203ENST00000394023 KDM5CP41229 1560 aa24.27■■□□□ 1.48
SMARCC2-203ENST00000394023 SCAF11Q99590 1463 aaKnown RBP24.27■■□□□ 1.48
SMARCC2-203ENST00000394023 BCAR3O75815 825 aa24.26■■□□□ 1.47
SMARCC2-203ENST00000394023 NOS1P29475 1434 aa24.25■■□□□ 1.47
SMARCC2-203ENST00000394023 BCORL1Q5H9F3 1711 aa24.25■■□□□ 1.47
SMARCC2-203ENST00000394023 UPF2Q9HAU5 1272 aaKnown RBP24.23■■□□□ 1.47
SMARCC2-203ENST00000394023 TCP11L2Q8N4U5 519 aa24.23■■□□□ 1.47
SMARCC2-203ENST00000394023 PREX2Q70Z35 1606 aa24.23■■□□□ 1.47
SMARCC2-203ENST00000394023 IDI1Q13907 227 aa24.22■■□□□ 1.47
SMARCC2-203ENST00000394023 PRAM1Q96QH2 718 aa24.21■■□□□ 1.47
SMARCC2-203ENST00000394023 PANK1Q8TE04 598 aa24.2■■□□□ 1.46
SMARCC2-203ENST00000394023 COL17A1Q9UMD9 1497 aaPredicted RBP24.2■■□□□ 1.46
SMARCC2-203ENST00000394023 FBXO31Q5XUX0 539 aaPredicted RBP24.19■■□□□ 1.46
SMARCC2-203ENST00000394023 DDRGK1Q96HY6 314 aa24.19■■□□□ 1.46
SMARCC2-203ENST00000394023 GPRASP1Q5JY77 1395 aa24.19■■□□□ 1.46
SMARCC2-203ENST00000394023 RUNDC1Q96C34 613 aa24.19■■□□□ 1.46
SMARCC2-203ENST00000394023 LRPPRCP42704 1394 aaKnown RBP24.19■■□□□ 1.46
SMARCC2-203ENST00000394023 PAK3O75914 559 aaPredicted RBP24.18■■□□□ 1.46
SMARCC2-203ENST00000394023 MYH16Q9H6N6 1097 aa24.18■■□□□ 1.46
SMARCC2-203ENST00000394023 MYO5CQ9NQX4 1742 aa24.18■■□□□ 1.46
SMARCC2-203ENST00000394023 SLC4A3P48751 1232 aa24.17■■□□□ 1.46
SMARCC2-203ENST00000394023 NSD3Q9BZ95 1437 aa24.17■■□□□ 1.46
SMARCC2-203ENST00000394023 CENPQQ7L2Z9 268 aaPredicted RBP24.16■■□□□ 1.46
SMARCC2-203ENST00000394023 CARD14Q9BXL6 1004 aa24.16■■□□□ 1.46
SMARCC2-203ENST00000394023 CDC42BPBQ9Y5S2 1711 aa24.16■■□□□ 1.46
SMARCC2-203ENST00000394023 CROCC2H7BZ55 1655 aa24.16■■□□□ 1.46
SMARCC2-203ENST00000394023 SMC4Q9NTJ3 1288 aa24.16■■□□□ 1.46
SMARCC2-203ENST00000394023 RTEL1-TNFRSF6BF6WH68 1400 aa24.16■■□□□ 1.46
SMARCC2-203ENST00000394023 C14orf37Q86TY3 774 aa24.15■■□□□ 1.46
SMARCC2-203ENST00000394023 MAST1Q9Y2H9 1570 aa24.15■■□□□ 1.46
SMARCC2-203ENST00000394023 DUSP27Q5VZP5 1158 aa24.14■■□□□ 1.46
SMARCC2-203ENST00000394023 SLFN5Q08AF3 891 aa24.14■■□□□ 1.45
SMARCC2-203ENST00000394023 CFAP65Q6ZU64 1925 aaKnown RBP24.14■■□□□ 1.45
SMARCC2-203ENST00000394023 C14orf93Q9H972 538 aaKnown RBP24.13■■□□□ 1.45
SMARCC2-203ENST00000394023 KDM5DQ9BY66 1539 aa24.12■■□□□ 1.45
SMARCC2-203ENST00000394023 ITPRIPQ8IWB1 547 aa24.12■■□□□ 1.45
SMARCC2-203ENST00000394023 ELL2O00472 640 aaPredicted RBP24.11■■□□□ 1.45
SMARCC2-203ENST00000394023 SLC52A1Q9NWF4 448 aa24.11■■□□□ 1.45
SMARCC2-203ENST00000394023 ZBTB7CA1YPR0 619 aa24.11■■□□□ 1.45
SMARCC2-203ENST00000394023 ATP7AQ04656 1500 aa24.1■■□□□ 1.45
SMARCC2-203ENST00000394023 ZCCHC11Q5TAX3 1644 aaKnown RBP24.09■■□□□ 1.45
SMARCC2-203ENST00000394023 DEKP35659 375 aaKnown RBP24.09■■□□□ 1.45
SMARCC2-203ENST00000394023 CABP1Q9NZU7 370 aa24.09■■□□□ 1.45
SMARCC2-203ENST00000394023 RPGRIP1LQ68CZ1 1315 aa24.08■■□□□ 1.45
SMARCC2-203ENST00000394023 WWC1Q8IX03 1113 aa24.08■■□□□ 1.45
SMARCC2-203ENST00000394023 PLEKHH1Q9ULM0 1364 aa24.08■■□□□ 1.44
SMARCC2-203ENST00000394023 ATP10AO60312 1499 aa24.08■■□□□ 1.44
SMARCC2-203ENST00000394023 PNNQ9H307 717 aaKnown RBP24.07■■□□□ 1.44
SMARCC2-203ENST00000394023 HDGFP51858 240 aaKnown RBP24.07■■□□□ 1.44
SMARCC2-203ENST00000394023 ZNF518AQ6AHZ1 1483 aa24.06■■□□□ 1.44
SMARCC2-203ENST00000394023 MS4A1P11836 297 aa24.06■■□□□ 1.44
SMARCC2-203ENST00000394023 TSR2Q969E8 191 aaKnown RBP24.06■■□□□ 1.44
SMARCC2-203ENST00000394023 RIPK4P57078 832 aa24.06■■□□□ 1.44
SMARCC2-203ENST00000394023 HMOX1P09601 288 aa24.06■■□□□ 1.44
SMARCC2-203ENST00000394023 EIF2AK4Q9P2K8 1649 aaKnown RBP24.06■■□□□ 1.44
SMARCC2-203ENST00000394023 ABCC1P33527 1531 aa24.06■■□□□ 1.44
SMARCC2-203ENST00000394023 DIAPH1O60610 1272 aaKnown RBP24.05■■□□□ 1.44
SMARCC2-203ENST00000394023 CDK19Q9BWU1 502 aa24.05■■□□□ 1.44
SMARCC2-203ENST00000394023 UGGT1Q9NYU2 1555 aa24.04■■□□□ 1.44
SMARCC2-203ENST00000394023 WAPLQ7Z5K2 1190 aa24.04■■□□□ 1.44
SMARCC2-203ENST00000394023 SPINK5Q9NQ38 1064 aaPredicted RBP24.04■■□□□ 1.44
SMARCC2-203ENST00000394023 UHRF1BP1LA0JNW5 1464 aa24.03■■□□□ 1.44
SMARCC2-203ENST00000394023 MAGI2Q86UL8 1455 aa24.02■■□□□ 1.44
SMARCC2-203ENST00000394023 TXNDC2Q86VQ3 553 aa24.02■■□□□ 1.44
SMARCC2-203ENST00000394023 FAM161AQ3B820 660 aa24.02■■□□□ 1.44
SMARCC2-203ENST00000394023 BACH2Q9BYV9 841 aa24.02■■□□□ 1.44
SMARCC2-203ENST00000394023 RNF123Q5XPI4 1314 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms