RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 UHRF1BP1Q6BDS2 1440 aa20.44■□□□□ 0.86
PDZD4-202ENST00000393758 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
PDZD4-202ENST00000393758 KIF14Q15058 1648 aa20.44■□□□□ 0.86
PDZD4-202ENST00000393758 GOLGA6L3A6NEY3 463 aa20.44■□□□□ 0.86
PDZD4-202ENST00000393758 GRIN2AQ12879 1464 aa20.44■□□□□ 0.86
PDZD4-202ENST00000393758 HSCBQ8IWL3 235 aa20.43■□□□□ 0.86
PDZD4-202ENST00000393758 TCP11L2Q8N4U5 519 aa20.43■□□□□ 0.86
PDZD4-202ENST00000393758 PDZRN3Q9UPQ7 1066 aa20.43■□□□□ 0.86
PDZD4-202ENST00000393758 TRIM44Q96DX7 344 aaPredicted RBP20.43■□□□□ 0.86
PDZD4-202ENST00000393758 AMER1Q5JTC6 1135 aaPredicted RBP20.42■□□□□ 0.86
PDZD4-202ENST00000393758 DMRT2Q9Y5R5 561 aa20.42■□□□□ 0.86
PDZD4-202ENST00000393758 KDM2BQ8NHM5 1336 aa20.42■□□□□ 0.86
PDZD4-202ENST00000393758 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
PDZD4-202ENST00000393758 STK26Q9P289 416 aa20.41■□□□□ 0.86
PDZD4-202ENST00000393758 TNNQ9UQP3 1299 aa20.41■□□□□ 0.86
PDZD4-202ENST00000393758 KIAA0556O60303 1618 aa20.4■□□□□ 0.86
PDZD4-202ENST00000393758 GGT6Q6P531 493 aa20.4■□□□□ 0.86
PDZD4-202ENST00000393758 MBD5Q9P267 1494 aa20.4■□□□□ 0.86
PDZD4-202ENST00000393758 NCLP19338 710 aaKnown RBP20.39■□□□□ 0.86
PDZD4-202ENST00000393758 EIF3AQ14152 1382 aaKnown RBP20.39■□□□□ 0.85
PDZD4-202ENST00000393758 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
PDZD4-202ENST00000393758 SLC12A5Q9H2X9 1139 aa20.39■□□□□ 0.85
PDZD4-202ENST00000393758 WWC1Q8IX03 1113 aa20.39■□□□□ 0.85
PDZD4-202ENST00000393758 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
PDZD4-202ENST00000393758 PNNQ9H307 717 aaKnown RBP20.38■□□□□ 0.85
PDZD4-202ENST00000393758 ARHGAP5Q13017 1502 aa20.38■□□□□ 0.85
PDZD4-202ENST00000393758 TMEM132EQ6IEE7 984 aa20.38■□□□□ 0.85
PDZD4-202ENST00000393758 PLEKHH2Q8IVE3 1493 aa20.38■□□□□ 0.85
PDZD4-202ENST00000393758 MTHFSP49914 203 aa20.37■□□□□ 0.85
PDZD4-202ENST00000393758 PDE3AQ14432 1141 aa20.37■□□□□ 0.85
PDZD4-202ENST00000393758 MYH16Q9H6N6 1097 aa20.37■□□□□ 0.85
PDZD4-202ENST00000393758 TSR2Q969E8 191 aaKnown RBP20.36■□□□□ 0.85
PDZD4-202ENST00000393758 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
PDZD4-202ENST00000393758 KANK1Q14678 1352 aa20.35■□□□□ 0.85
PDZD4-202ENST00000393758 ANP32BQ92688 251 aaKnown RBP20.35■□□□□ 0.85
PDZD4-202ENST00000393758 CCDC141Q6ZP82 1450 aa20.35■□□□□ 0.85
PDZD4-202ENST00000393758 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
PDZD4-202ENST00000393758 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
PDZD4-202ENST00000393758 ATP10BO94823 1461 aa20.34■□□□□ 0.85
PDZD4-202ENST00000393758 RSPH6AQ9H0K4 717 aa20.34■□□□□ 0.85
PDZD4-202ENST00000393758 ZKSCAN2Q63HK3 967 aa20.33■□□□□ 0.85
PDZD4-202ENST00000393758 SYNJ2O15056 1496 aa20.33■□□□□ 0.85
PDZD4-202ENST00000393758 C22orf23Q9BZE7 217 aa20.33■□□□□ 0.84
PDZD4-202ENST00000393758 ARHGEF12Q9NZN5 1544 aa20.33■□□□□ 0.84
PDZD4-202ENST00000393758 FAM135AQ9P2D6 1515 aa20.33■□□□□ 0.84
PDZD4-202ENST00000393758 NKTRP30414 1462 aaKnown RBP20.32■□□□□ 0.84
PDZD4-202ENST00000393758 ELL2O00472 640 aaPredicted RBP20.32■□□□□ 0.84
PDZD4-202ENST00000393758 DZIP1LQ8IYY4 767 aaKnown RBP20.32■□□□□ 0.84
PDZD4-202ENST00000393758 PCDHB15Q9Y5E8 787 aa20.32■□□□□ 0.84
PDZD4-202ENST00000393758 ADGRL2O95490 1459 aa20.31■□□□□ 0.84
PDZD4-202ENST00000393758 A2MP01023 1474 aa20.3■□□□□ 0.84
PDZD4-202ENST00000393758 TBC1D2Q9BYX2 928 aa20.3■□□□□ 0.84
PDZD4-202ENST00000393758 LNPKQ9C0E8 428 aa20.3■□□□□ 0.84
PDZD4-202ENST00000393758 COL17A1Q9UMD9 1497 aaPredicted RBP20.3■□□□□ 0.84
PDZD4-202ENST00000393758 APBB1O00213 710 aa20.3■□□□□ 0.84
PDZD4-202ENST00000393758 GLIPR1L2Q4G1C9 344 aa20.29■□□□□ 0.84
PDZD4-202ENST00000393758 FAM43AQ8N2R8 423 aa20.29■□□□□ 0.84
PDZD4-202ENST00000393758 TARBP1Q13395 1621 aaKnown RBP20.29■□□□□ 0.84
PDZD4-202ENST00000393758 RARSP54136 660 aaKnown RBP20.29■□□□□ 0.84
PDZD4-202ENST00000393758 BLMP54132 1417 aaPredicted RBP20.29■□□□□ 0.84
PDZD4-202ENST00000393758 SLC24A1O60721 1099 aa20.29■□□□□ 0.84
PDZD4-202ENST00000393758 RLBP1P12271 317 aa20.29■□□□□ 0.84
PDZD4-202ENST00000393758 ITSN2Q9NZM3 1697 aa20.28■□□□□ 0.84
PDZD4-202ENST00000393758 TPRNQ4KMQ1 711 aa20.28■□□□□ 0.84
PDZD4-202ENST00000393758 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
PDZD4-202ENST00000393758 STAG3Q9UJ98 1225 aa20.26■□□□□ 0.83
PDZD4-202ENST00000393758 TRAK2O60296 914 aa20.26■□□□□ 0.83
PDZD4-202ENST00000393758 CHMP5Q9NZZ3 219 aa20.26■□□□□ 0.83
PDZD4-202ENST00000393758 EXOSC9Q06265 439 aaKnown RBP20.25■□□□□ 0.83
PDZD4-202ENST00000393758 ZMYM4Q5VZL5 1548 aa20.25■□□□□ 0.83
PDZD4-202ENST00000393758 CARD14Q9BXL6 1004 aa20.24■□□□□ 0.83
PDZD4-202ENST00000393758 GGNBP2Q9H3C7 697 aa20.24■□□□□ 0.83
PDZD4-202ENST00000393758 ADGRF5Q8IZF2 1346 aa20.24■□□□□ 0.83
PDZD4-202ENST00000393758 GOLGA6L22H0YM25 854 aa20.23■□□□□ 0.83
PDZD4-202ENST00000393758 ANKRD45Q5TZF3 282 aa20.23■□□□□ 0.83
PDZD4-202ENST00000393758 MCM4P33991 863 aa20.22■□□□□ 0.83
PDZD4-202ENST00000393758 PANK2Q9BZ23 570 aa20.22■□□□□ 0.83
PDZD4-202ENST00000393758 CABP2Q9NPB3 220 aa20.22■□□□□ 0.83
PDZD4-202ENST00000393758 MAGI2Q86UL8 1455 aa20.21■□□□□ 0.83
PDZD4-202ENST00000393758 ZBTB7CA1YPR0 619 aa20.2■□□□□ 0.82
PDZD4-202ENST00000393758 NGEFQ8N5V2 710 aa20.19■□□□□ 0.82
PDZD4-202ENST00000393758 MVPQ14764 893 aaKnown RBP20.19■□□□□ 0.82
PDZD4-202ENST00000393758 IPO8O15397 1037 aaKnown RBP20.19■□□□□ 0.82
PDZD4-202ENST00000393758 GBP4Q96PP9 640 aa20.19■□□□□ 0.82
PDZD4-202ENST00000393758 C1orf115Q9H7X2 142 aa20.19■□□□□ 0.82
PDZD4-202ENST00000393758 SYCP2Q9BX26 1530 aa20.18■□□□□ 0.82
PDZD4-202ENST00000393758 RIPK4P57078 832 aa20.18■□□□□ 0.82
PDZD4-202ENST00000393758 TBC1D32Q96NH3 1257 aa20.18■□□□□ 0.82
PDZD4-202ENST00000393758 NSD3Q9BZ95 1437 aa20.17■□□□□ 0.82
PDZD4-202ENST00000393758 ADGBQ8N7X0 1667 aa20.17■□□□□ 0.82
PDZD4-202ENST00000393758 NOB1Q9ULX3 412 aaKnown RBP20.17■□□□□ 0.82
PDZD4-202ENST00000393758 DDX19BQ9UMR2 479 aa20.17■□□□□ 0.82
PDZD4-202ENST00000393758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.17■□□□□ 0.82
PDZD4-202ENST00000393758 ZNF521Q96K83 1311 aa20.17■□□□□ 0.82
PDZD4-202ENST00000393758 GPRASP1Q5JY77 1395 aa20.17■□□□□ 0.82
PDZD4-202ENST00000393758 ARID3AQ99856 593 aa20.16■□□□□ 0.82
PDZD4-202ENST00000393758 RRAGDQ9NQL2 400 aaPredicted RBP20.15■□□□□ 0.82
PDZD4-202ENST00000393758 DDX11L8A8MPP1 907 aa20.15■□□□□ 0.82
PDZD4-202ENST00000393758 XRCC6P12956 609 aaKnown RBP eCLIP20.14■□□□□ 0.82
PDZD4-202ENST00000393758 FOXD4L5Q5VV16 416 aaPredicted RBP20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms