RNA–Protein interactions for RNA: ENST00000392686.6

KCNMB3-204, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 3, humanhuman

TSL 1 (best)

Gene KCNMB3, Length 2,055 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3-204ENST00000392686 IL27Q8NEV9 243 aa17.24■□□□□ 0.35
KCNMB3-204ENST00000392686 MYOM1P52179 1685 aa17.23■□□□□ 0.35
KCNMB3-204ENST00000392686 ASXL1Q8IXJ9 1541 aa17.23■□□□□ 0.35
KCNMB3-204ENST00000392686 ABCC2Q92887 1545 aa17.23■□□□□ 0.35
KCNMB3-204ENST00000392686 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
KCNMB3-204ENST00000392686 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.22■□□□□ 0.35
KCNMB3-204ENST00000392686 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
KCNMB3-204ENST00000392686 NPC1L1Q9UHC9 1359 aa17.21■□□□□ 0.35
KCNMB3-204ENST00000392686 WDR43Q15061 677 aaKnown RBP eCLIP17.21■□□□□ 0.35
KCNMB3-204ENST00000392686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
KCNMB3-204ENST00000392686 VIRMAQ69YN4 1812 aaKnown RBP17.21■□□□□ 0.34
KCNMB3-204ENST00000392686 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
KCNMB3-204ENST00000392686 C8orf34Q49A92 452 aa17.2■□□□□ 0.34
KCNMB3-204ENST00000392686 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
KCNMB3-204ENST00000392686 CEP152O94986 1710 aa17.2■□□□□ 0.34
KCNMB3-204ENST00000392686 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
KCNMB3-204ENST00000392686 SCAPERQ9BY12 1400 aa17.2■□□□□ 0.34
KCNMB3-204ENST00000392686 TRPM2O94759 1503 aa17.19■□□□□ 0.34
KCNMB3-204ENST00000392686 SCAF11Q99590 1463 aaKnown RBP17.19■□□□□ 0.34
KCNMB3-204ENST00000392686 NFKBIBQ15653 356 aa17.19■□□□□ 0.34
KCNMB3-204ENST00000392686 SLFN5Q08AF3 891 aa17.17■□□□□ 0.34
KCNMB3-204ENST00000392686 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
KCNMB3-204ENST00000392686 TRMT2AQ8IZ69 625 aaKnown RBP17.17■□□□□ 0.34
KCNMB3-204ENST00000392686 GSE1Q14687 1217 aa17.17■□□□□ 0.34
KCNMB3-204ENST00000392686 KIAA1210Q9ULL0 1709 aa17.16■□□□□ 0.34
KCNMB3-204ENST00000392686 KDM5AP29375 1690 aaKnown RBP17.16■□□□□ 0.34
KCNMB3-204ENST00000392686 NKTRP30414 1462 aaKnown RBP17.15■□□□□ 0.34
KCNMB3-204ENST00000392686 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
KCNMB3-204ENST00000392686 SHROOM2Q13796 1616 aa17.14■□□□□ 0.34
KCNMB3-204ENST00000392686 DAXXQ9UER7 740 aaPredicted RBP17.14■□□□□ 0.33
KCNMB3-204ENST00000392686 ABCC1P33527 1531 aa17.13■□□□□ 0.33
KCNMB3-204ENST00000392686 PTPRTO14522 1441 aa17.12■□□□□ 0.33
KCNMB3-204ENST00000392686 CLTCL1P53675 1640 aa17.12■□□□□ 0.33
KCNMB3-204ENST00000392686 NEURL4Q96JN8 1562 aa17.12■□□□□ 0.33
KCNMB3-204ENST00000392686 EIF5BO60841 1220 aaKnown RBP17.11■□□□□ 0.33
KCNMB3-204ENST00000392686 SLC4A3P48751 1232 aa17.11■□□□□ 0.33
KCNMB3-204ENST00000392686 DEPDC5O75140 1603 aa17.11■□□□□ 0.33
KCNMB3-204ENST00000392686 PLCH2O75038 1416 aa17.1■□□□□ 0.33
KCNMB3-204ENST00000392686 NINLQ9Y2I6 1382 aa17.09■□□□□ 0.33
KCNMB3-204ENST00000392686 NGEFQ8N5V2 710 aa17.09■□□□□ 0.33
KCNMB3-204ENST00000392686 TET3O43151 1660 aa17.09■□□□□ 0.33
KCNMB3-204ENST00000392686 E9PSI1 815 aa17.08■□□□□ 0.32
KCNMB3-204ENST00000392686 FRAT1Q92837 279 aaPredicted RBP17.08■□□□□ 0.32
KCNMB3-204ENST00000392686 RTN4Q9NQC3 1192 aaKnown RBP17.08■□□□□ 0.32
KCNMB3-204ENST00000392686 CHD1O14646 1710 aa17.07■□□□□ 0.32
KCNMB3-204ENST00000392686 RGS3P49796 1198 aa17.06■□□□□ 0.32
KCNMB3-204ENST00000392686 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
KCNMB3-204ENST00000392686 BRPF3Q9ULD4 1205 aa17.05■□□□□ 0.32
KCNMB3-204ENST00000392686 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
KCNMB3-204ENST00000392686 RTEL1-TNFRSF6BF6WH68 1400 aa17.05■□□□□ 0.32
KCNMB3-204ENST00000392686 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
KCNMB3-204ENST00000392686 TRAPPC8Q9Y2L5 1435 aa17.04■□□□□ 0.32
KCNMB3-204ENST00000392686 CGNL1Q0VF96 1302 aa17.04■□□□□ 0.32
KCNMB3-204ENST00000392686 APAF1O14727 1248 aa17.04■□□□□ 0.32
KCNMB3-204ENST00000392686 VWDEQ8N2E2 1590 aa17.04■□□□□ 0.32
KCNMB3-204ENST00000392686 ERVK-7P63135 1459 aa17.03■□□□□ 0.32
KCNMB3-204ENST00000392686 PDE3AQ14432 1141 aa17.03■□□□□ 0.32
KCNMB3-204ENST00000392686 MYOM2P54296 1465 aa17.03■□□□□ 0.32
KCNMB3-204ENST00000392686 MYO3AQ8NEV4 1616 aa17.03■□□□□ 0.32
KCNMB3-204ENST00000392686 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
KCNMB3-204ENST00000392686 ABCA6Q8N139 1617 aa17.02■□□□□ 0.32
KCNMB3-204ENST00000392686 MAP3K4Q9Y6R4 1608 aa17.02■□□□□ 0.32
KCNMB3-204ENST00000392686 BCAR3O75815 825 aa17.02■□□□□ 0.32
KCNMB3-204ENST00000392686 ZCCHC11Q5TAX3 1644 aaKnown RBP17.02■□□□□ 0.31
KCNMB3-204ENST00000392686 USP19O94966 1318 aa17.02■□□□□ 0.31
KCNMB3-204ENST00000392686 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.31
KCNMB3-204ENST00000392686 ARAP3Q8WWN8 1544 aa17.01■□□□□ 0.31
KCNMB3-204ENST00000392686 EFCAB2Q5VUJ9 269 aa17.01■□□□□ 0.31
KCNMB3-204ENST00000392686 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
KCNMB3-204ENST00000392686 POLR3AO14802 1390 aaPredicted RBP17■□□□□ 0.31
KCNMB3-204ENST00000392686 IFT172Q9UG01 1749 aa17■□□□□ 0.31
KCNMB3-204ENST00000392686 SHPRHQ149N8 1683 aa17■□□□□ 0.31
KCNMB3-204ENST00000392686 ZMYM3Q14202 1370 aa17■□□□□ 0.31
KCNMB3-204ENST00000392686 IGHDP01880 384 aa17■□□□□ 0.31
KCNMB3-204ENST00000392686 PKNOX2Q96KN3 472 aa17■□□□□ 0.31
KCNMB3-204ENST00000392686 NLRP1Q9C000 1473 aa16.99■□□□□ 0.31
KCNMB3-204ENST00000392686 CENPJQ9HC77 1338 aaPredicted RBP16.98■□□□□ 0.31
KCNMB3-204ENST00000392686 CLUAP1Q96AJ1 413 aa16.98■□□□□ 0.31
KCNMB3-204ENST00000392686 ERCC6L2Q5T890 1561 aa16.98■□□□□ 0.31
KCNMB3-204ENST00000392686 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
KCNMB3-204ENST00000392686 UHRF1BP1LA0JNW5 1464 aa16.97■□□□□ 0.31
KCNMB3-204ENST00000392686 SBNO2Q9Y2G9 1366 aa16.97■□□□□ 0.31
KCNMB3-204ENST00000392686 INO80Q9ULG1 1556 aaPredicted RBP16.97■□□□□ 0.31
KCNMB3-204ENST00000392686 IQSEC2Q5JU85 1478 aa16.96■□□□□ 0.31
KCNMB3-204ENST00000392686 AAMPQ13685 434 aa16.96■□□□□ 0.31
KCNMB3-204ENST00000392686 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.96■□□□□ 0.31
KCNMB3-204ENST00000392686 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.31
KCNMB3-204ENST00000392686 KIF1BO60333 1816 aa16.94■□□□□ 0.3
KCNMB3-204ENST00000392686 NRXN1Q9ULB1 1477 aa16.94■□□□□ 0.3
KCNMB3-204ENST00000392686 BECN1Q14457 450 aa16.93■□□□□ 0.3
KCNMB3-204ENST00000392686 WWC1Q8IX03 1113 aa16.93■□□□□ 0.3
KCNMB3-204ENST00000392686 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
KCNMB3-204ENST00000392686 KANK1Q14678 1352 aa16.93■□□□□ 0.3
KCNMB3-204ENST00000392686 ATP7AQ04656 1500 aa16.93■□□□□ 0.3
KCNMB3-204ENST00000392686 MROH1Q8NDA8 1641 aa16.93■□□□□ 0.3
KCNMB3-204ENST00000392686 USP32Q8NFA0 1604 aa16.93■□□□□ 0.3
KCNMB3-204ENST00000392686 ZC3H13Q5T200 1668 aaKnown RBP16.92■□□□□ 0.3
KCNMB3-204ENST00000392686 SETBP1Q9Y6X0 1596 aa16.92■□□□□ 0.3
KCNMB3-204ENST00000392686 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
KCNMB3-204ENST00000392686 PMFBP1Q8TBY8 1022 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms