RNA–Protein interactions for RNA: ENST00000392686.6

KCNMB3-204, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 3, humanhuman

TSL 1 (best)

Gene KCNMB3, Length 2,055 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3-204ENST00000392686 NISCHQ9Y2I1 1504 aa26.56■■□□□ 1.84
KCNMB3-204ENST00000392686 SHROOM4Q9ULL8 1493 aa22.68■■□□□ 1.22
KCNMB3-204ENST00000392686 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.21
KCNMB3-204ENST00000392686 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
KCNMB3-204ENST00000392686 SUPT5HO00267 1087 aaKnown RBP22.38■■□□□ 1.17
KCNMB3-204ENST00000392686 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
KCNMB3-204ENST00000392686 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
KCNMB3-204ENST00000392686 HRCP23327 699 aa21.98■■□□□ 1.11
KCNMB3-204ENST00000392686 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
KCNMB3-204ENST00000392686 DCAF8L2P0C7V8 631 aa21.62■■□□□ 1.05
KCNMB3-204ENST00000392686 PCGF6Q9BYE7 350 aa21.62■■□□□ 1.05
KCNMB3-204ENST00000392686 ABCC9O60706 1549 aa21.41■■□□□ 1.02
KCNMB3-204ENST00000392686 PELP1Q8IZL8 1130 aaKnown RBP21.35■■□□□ 1.01
KCNMB3-204ENST00000392686 PPARGC1BQ86YN6 1023 aaKnown RBP21.34■■□□□ 1.01
KCNMB3-204ENST00000392686 LOC105371045A0A1W2PR82 267 aa21.3■■□□□ 1
KCNMB3-204ENST00000392686 TRIM26Q12899 539 aaPredicted RBP21.23■□□□□ 0.99
KCNMB3-204ENST00000392686 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
KCNMB3-204ENST00000392686 SCRIBQ14160 1630 aa21.04■□□□□ 0.96
KCNMB3-204ENST00000392686 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
KCNMB3-204ENST00000392686 ZEB1P37275 1124 aaPredicted RBP20.97■□□□□ 0.95
KCNMB3-204ENST00000392686 TRIM41Q8WV44 630 aa20.88■□□□□ 0.93
KCNMB3-204ENST00000392686 MYT1Q01538 1121 aa20.85■□□□□ 0.93
KCNMB3-204ENST00000392686 NACADO15069 1562 aa20.7■□□□□ 0.9
KCNMB3-204ENST00000392686 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
KCNMB3-204ENST00000392686 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
KCNMB3-204ENST00000392686 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
KCNMB3-204ENST00000392686 EIF4G1Q04637 1599 aaKnown RBP20.56■□□□□ 0.88
KCNMB3-204ENST00000392686 WIZO95785 1651 aa20.56■□□□□ 0.88
KCNMB3-204ENST00000392686 BAZ1AQ9NRL2 1556 aaPredicted RBP20.54■□□□□ 0.88
KCNMB3-204ENST00000392686 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
KCNMB3-204ENST00000392686 EHMT2Q96KQ7 1210 aa20.36■□□□□ 0.85
KCNMB3-204ENST00000392686 WRNQ14191 1432 aaPredicted RBP eCLIP20.3■□□□□ 0.84
KCNMB3-204ENST00000392686 TOP2AP11388 1531 aaKnown RBP20.3■□□□□ 0.84
KCNMB3-204ENST00000392686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.22■□□□□ 0.83
KCNMB3-204ENST00000392686 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
KCNMB3-204ENST00000392686 SMARCA4P51532 1647 aa20.19■□□□□ 0.82
KCNMB3-204ENST00000392686 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
KCNMB3-204ENST00000392686 ABCC8Q09428 1581 aa20.18■□□□□ 0.82
KCNMB3-204ENST00000392686 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
KCNMB3-204ENST00000392686 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
KCNMB3-204ENST00000392686 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
KCNMB3-204ENST00000392686 TNIKQ9UKE5 1360 aa20.12■□□□□ 0.81
KCNMB3-204ENST00000392686 EEA1Q15075 1411 aa20.12■□□□□ 0.81
KCNMB3-204ENST00000392686 NEUROD1Q13562 356 aa20.04■□□□□ 0.8
KCNMB3-204ENST00000392686 DIEXFQ68CQ4 756 aaKnown RBP20.04■□□□□ 0.8
KCNMB3-204ENST00000392686 SOGA1O94964 1423 aa20.03■□□□□ 0.8
KCNMB3-204ENST00000392686 UNC13AQ9UPW8 1703 aa20.02■□□□□ 0.79
KCNMB3-204ENST00000392686 CENPBP07199 599 aaPredicted RBP19.98■□□□□ 0.79
KCNMB3-204ENST00000392686 GOLGA3Q08378 1498 aa19.96■□□□□ 0.79
KCNMB3-204ENST00000392686 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
KCNMB3-204ENST00000392686 RUSC2Q8N2Y8 1516 aa19.91■□□□□ 0.78
KCNMB3-204ENST00000392686 GTF3C3Q9Y5Q9 886 aa19.87■□□□□ 0.77
KCNMB3-204ENST00000392686 KIF21BO75037 1637 aa19.86■□□□□ 0.77
KCNMB3-204ENST00000392686 TTBK1Q5TCY1 1321 aaPredicted RBP19.84■□□□□ 0.77
KCNMB3-204ENST00000392686 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
KCNMB3-204ENST00000392686 ZNF316A6NFI3 1004 aaPredicted RBP19.83■□□□□ 0.77
KCNMB3-204ENST00000392686 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
KCNMB3-204ENST00000392686 UBTFP17480 764 aaKnown RBP19.81■□□□□ 0.76
KCNMB3-204ENST00000392686 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
KCNMB3-204ENST00000392686 BAZ1BQ9UIG0 1483 aaKnown RBP19.72■□□□□ 0.75
KCNMB3-204ENST00000392686 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
KCNMB3-204ENST00000392686 CLIP1P30622 1438 aa19.69■□□□□ 0.74
KCNMB3-204ENST00000392686 VPS8Q8N3P4 1428 aa19.69■□□□□ 0.74
KCNMB3-204ENST00000392686 HNRNPUL2Q1KMD3 747 aaKnown RBP19.56■□□□□ 0.72
KCNMB3-204ENST00000392686 RAPGEF2Q9Y4G8 1499 aa19.56■□□□□ 0.72
KCNMB3-204ENST00000392686 MIER1Q8N108 512 aa19.54■□□□□ 0.72
KCNMB3-204ENST00000392686 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
KCNMB3-204ENST00000392686 TOP2BQ02880 1626 aa19.52■□□□□ 0.71
KCNMB3-204ENST00000392686 YTHDC1Q96MU7 727 aaKnown RBP19.49■□□□□ 0.71
KCNMB3-204ENST00000392686 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
KCNMB3-204ENST00000392686 BIVM-ERCC5R4GMW8 1640 aa19.48■□□□□ 0.71
KCNMB3-204ENST00000392686 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
KCNMB3-204ENST00000392686 APLP2Q06481 763 aa19.47■□□□□ 0.71
KCNMB3-204ENST00000392686 PABPN1Q86U42 306 aaKnown RBP eCLIP19.45■□□□□ 0.7
KCNMB3-204ENST00000392686 ARAP1Q96P48 1450 aa19.39■□□□□ 0.69
KCNMB3-204ENST00000392686 PRXQ9BXM0 1461 aa19.39■□□□□ 0.69
KCNMB3-204ENST00000392686 DHX57Q6P158 1386 aaKnown RBP19.38■□□□□ 0.69
KCNMB3-204ENST00000392686 RRBP1Q9P2E9 1410 aaKnown RBP19.31■□□□□ 0.68
KCNMB3-204ENST00000392686 CUX2O14529 1486 aa19.31■□□□□ 0.68
KCNMB3-204ENST00000392686 RANGAP1P46060 587 aaPredicted RBP19.21■□□□□ 0.67
KCNMB3-204ENST00000392686 CUX1P39880 1505 aa19.2■□□□□ 0.66
KCNMB3-204ENST00000392686 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
KCNMB3-204ENST00000392686 KANK4Q5T7N3 995 aaPredicted RBP19.2■□□□□ 0.66
KCNMB3-204ENST00000392686 KIF27Q86VH2 1401 aa19.18■□□□□ 0.66
KCNMB3-204ENST00000392686 CCNB3Q8WWL7 1395 aa19.14■□□□□ 0.66
KCNMB3-204ENST00000392686 ARHGAP35Q9NRY4 1499 aa19.14■□□□□ 0.65
KCNMB3-204ENST00000392686 NCAPD3P42695 1498 aa19.11■□□□□ 0.65
KCNMB3-204ENST00000392686 SUPT16HQ9Y5B9 1047 aaKnown RBP19.1■□□□□ 0.65
KCNMB3-204ENST00000392686 MAP3K1Q13233 1512 aa19.09■□□□□ 0.65
KCNMB3-204ENST00000392686 CFTRP13569 1480 aa19.06■□□□□ 0.64
KCNMB3-204ENST00000392686 MAPKBP1O60336 1514 aa19.05■□□□□ 0.64
KCNMB3-204ENST00000392686 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
KCNMB3-204ENST00000392686 TIAM1Q13009 1591 aa19.04■□□□□ 0.64
KCNMB3-204ENST00000392686 RAB3GAP2Q9H2M9 1393 aa19■□□□□ 0.63
KCNMB3-204ENST00000392686 CFAP43Q8NDM7 1665 aa18.94■□□□□ 0.62
KCNMB3-204ENST00000392686 SETD5Q9C0A6 1442 aa18.93■□□□□ 0.62
KCNMB3-204ENST00000392686 LRRC9Q6ZRR7 1453 aa18.92■□□□□ 0.62
KCNMB3-204ENST00000392686 BCL11AQ9H165 835 aa18.91■□□□□ 0.62
KCNMB3-204ENST00000392686 IGF1RP08069 1367 aa18.91■□□□□ 0.62
KCNMB3-204ENST00000392686 TSHZ2Q9NRE2 1034 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms