RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 BCL11BQ9C0K0 894 aaPredicted RBP21.13■□□□□ 0.97
TRA2A-202ENST00000392502 TRAPPC8Q9Y2L5 1435 aa21.12■□□□□ 0.97
TRA2A-202ENST00000392502 FRAT2O75474 233 aaPredicted RBP21.1■□□□□ 0.97
TRA2A-202ENST00000392502 EFCAB2Q5VUJ9 269 aa21.1■□□□□ 0.97
TRA2A-202ENST00000392502 ROCK2O75116 1388 aaKnown RBP21.09■□□□□ 0.97
TRA2A-202ENST00000392502 ARID4BQ4LE39 1312 aaPredicted RBP21.08■□□□□ 0.97
TRA2A-202ENST00000392502 PRAG1Q86YV5 1406 aa21.08■□□□□ 0.96
TRA2A-202ENST00000392502 ABCA9Q8IUA7 1624 aa21.07■□□□□ 0.96
TRA2A-202ENST00000392502 A2MP01023 1474 aa21.07■□□□□ 0.96
TRA2A-202ENST00000392502 NBPF1Q3BBV0 1214 aa21.07■□□□□ 0.96
TRA2A-202ENST00000392502 SMAP1Q8IYB5 467 aaPredicted RBP21.07■□□□□ 0.96
TRA2A-202ENST00000392502 RTEL1-TNFRSF6BF6WH68 1400 aa21.07■□□□□ 0.96
TRA2A-202ENST00000392502 ATP10AO60312 1499 aa21.07■□□□□ 0.96
TRA2A-202ENST00000392502 TRPM1Q7Z4N2 1603 aa21.06■□□□□ 0.96
TRA2A-202ENST00000392502 LAMC1P11047 1609 aa21.05■□□□□ 0.96
TRA2A-202ENST00000392502 NPM1P06748 294 aaKnown RBP eCLIP21.05■□□□□ 0.96
TRA2A-202ENST00000392502 AFAP1Q8N556 730 aa21.05■□□□□ 0.96
TRA2A-202ENST00000392502 WDR7Q9Y4E6 1490 aa21.05■□□□□ 0.96
TRA2A-202ENST00000392502 TERF1P54274 439 aa21.04■□□□□ 0.96
TRA2A-202ENST00000392502 RGS3P49796 1198 aa21.02■□□□□ 0.96
TRA2A-202ENST00000392502 ASXL2Q76L83 1435 aa21.01■□□□□ 0.95
TRA2A-202ENST00000392502 DEPDC5O75140 1603 aa21.01■□□□□ 0.95
TRA2A-202ENST00000392502 MTERF4Q7Z6M4 381 aaKnown RBP21■□□□□ 0.95
TRA2A-202ENST00000392502 EIF2AK4Q9P2K8 1649 aaKnown RBP21■□□□□ 0.95
TRA2A-202ENST00000392502 SPAG9O60271 1321 aaKnown RBP21■□□□□ 0.95
TRA2A-202ENST00000392502 ZFYVE16Q7Z3T8 1539 aa20.99■□□□□ 0.95
TRA2A-202ENST00000392502 INO80Q9ULG1 1556 aaPredicted RBP20.99■□□□□ 0.95
TRA2A-202ENST00000392502 SENP3-EIF4A1A0A087X0R7 540 aa20.98■□□□□ 0.95
TRA2A-202ENST00000392502 ISY1Q9ULR0 285 aaKnown RBP20.98■□□□□ 0.95
TRA2A-202ENST00000392502 GOLGA6L3A6NEY3 463 aa20.98■□□□□ 0.95
TRA2A-202ENST00000392502 FSD2A1L4K1 749 aa20.97■□□□□ 0.95
TRA2A-202ENST00000392502 UTP14CQ5TAP6 766 aaKnown RBP20.96■□□□□ 0.95
TRA2A-202ENST00000392502 E9PCH4 1651 aa20.96■□□□□ 0.95
TRA2A-202ENST00000392502 GPRASP1Q5JY77 1395 aa20.95■□□□□ 0.94
TRA2A-202ENST00000392502 BBXQ8WY36 941 aaPredicted RBP20.94■□□□□ 0.94
TRA2A-202ENST00000392502 CFAP74Q9C0B2 1584 aa20.94■□□□□ 0.94
TRA2A-202ENST00000392502 ESPNB1AK53 854 aa20.94■□□□□ 0.94
TRA2A-202ENST00000392502 CANXP27824 592 aaKnown RBP20.94■□□□□ 0.94
TRA2A-202ENST00000392502 RRP1P56182 461 aaKnown RBP20.93■□□□□ 0.94
TRA2A-202ENST00000392502 XRCC6P12956 609 aaKnown RBP eCLIP20.93■□□□□ 0.944e-7■□□□□ 9.8
TRA2A-202ENST00000392502 NAP1L2Q9ULW6 460 aaPredicted RBP20.93■□□□□ 0.94
TRA2A-202ENST00000392502 IPO4Q8TEX9 1081 aaKnown RBP20.92■□□□□ 0.94
TRA2A-202ENST00000392502 POGKQ9P215 609 aa20.92■□□□□ 0.94
TRA2A-202ENST00000392502 PRDM15P57071 1507 aaPredicted RBP20.92■□□□□ 0.94
TRA2A-202ENST00000392502 TET3O43151 1660 aa20.92■□□□□ 0.94
TRA2A-202ENST00000392502 FANCAO15360 1455 aa20.91■□□□□ 0.94
TRA2A-202ENST00000392502 PNISRQ8TF01 805 aaKnown RBP20.91■□□□□ 0.94
TRA2A-202ENST00000392502 MRE11P49959 708 aa20.9■□□□□ 0.94
TRA2A-202ENST00000392502 ATP7AQ04656 1500 aa20.9■□□□□ 0.94
TRA2A-202ENST00000392502 NEURL4Q96JN8 1562 aa20.9■□□□□ 0.94
TRA2A-202ENST00000392502 TESK2Q96S53 571 aa20.9■□□□□ 0.94
TRA2A-202ENST00000392502 DISP3Q9P2K9 1392 aa20.9■□□□□ 0.94
TRA2A-202ENST00000392502 CEP152O94986 1710 aa20.89■□□□□ 0.94
TRA2A-202ENST00000392502 VWDEQ8N2E2 1590 aa20.89■□□□□ 0.93
TRA2A-202ENST00000392502 TMC1Q8TDI8 760 aa20.89■□□□□ 0.93
TRA2A-202ENST00000392502 SPHKAPQ2M3C7 1700 aa20.89■□□□□ 0.93
TRA2A-202ENST00000392502 RNF17Q9BXT8 1623 aaKnown RBP20.87■□□□□ 0.93
TRA2A-202ENST00000392502 FAM161AQ3B820 660 aa20.87■□□□□ 0.93
TRA2A-202ENST00000392502 TRPM2O94759 1503 aa20.87■□□□□ 0.93
TRA2A-202ENST00000392502 COL17A1Q9UMD9 1497 aaPredicted RBP20.86■□□□□ 0.93
TRA2A-202ENST00000392502 SLC4A3P48751 1232 aa20.86■□□□□ 0.93
TRA2A-202ENST00000392502 SCAPERQ9BY12 1400 aa20.86■□□□□ 0.93
TRA2A-202ENST00000392502 GTF2E1P29083 439 aaPredicted RBP20.85■□□□□ 0.93
TRA2A-202ENST00000392502 MYBBP1AQ9BQG0 1328 aaKnown RBP20.85■□□□□ 0.93
TRA2A-202ENST00000392502 EXOC6Q8TAG9 804 aa20.85■□□□□ 0.93
TRA2A-202ENST00000392502 ADGRL1O94910 1474 aa20.84■□□□□ 0.93
TRA2A-202ENST00000392502 MYH16Q9H6N6 1097 aa20.84■□□□□ 0.93
TRA2A-202ENST00000392502 CLTCL1P53675 1640 aa20.84■□□□□ 0.93
TRA2A-202ENST00000392502 KIF3BO15066 747 aa20.83■□□□□ 0.93
TRA2A-202ENST00000392502 PER1O15534 1290 aaPredicted RBP20.83■□□□□ 0.93
TRA2A-202ENST00000392502 KTN1Q86UP2 1357 aaKnown RBP20.83■□□□□ 0.92
TRA2A-202ENST00000392502 RALBP1Q15311 655 aa20.82■□□□□ 0.92
TRA2A-202ENST00000392502 TNNT2P45379 298 aaPredicted RBP20.82■□□□□ 0.92
TRA2A-202ENST00000392502 STAC3Q96MF2 364 aa20.82■□□□□ 0.92
TRA2A-202ENST00000392502 MADDQ8WXG6 1647 aa20.82■□□□□ 0.92
TRA2A-202ENST00000392502 BECN1Q14457 450 aa20.81■□□□□ 0.92
TRA2A-202ENST00000392502 PTPRTO14522 1441 aa20.81■□□□□ 0.92
TRA2A-202ENST00000392502 BRD4O60885 1362 aaPredicted RBP20.81■□□□□ 0.92
TRA2A-202ENST00000392502 LRPPRCP42704 1394 aaKnown RBP20.8■□□□□ 0.92
TRA2A-202ENST00000392502 TRIM44Q96DX7 344 aaPredicted RBP20.8■□□□□ 0.92
TRA2A-202ENST00000392502 DIP2BQ9P265 1576 aa20.8■□□□□ 0.92
TRA2A-202ENST00000392502 PARD3Q8TEW0 1356 aa20.79■□□□□ 0.92
TRA2A-202ENST00000392502 GLI2P10070 1586 aa20.79■□□□□ 0.92
TRA2A-202ENST00000392502 KIAA1211Q6ZU35 1233 aa20.78■□□□□ 0.92
TRA2A-202ENST00000392502 KIAA1210Q9ULL0 1709 aa20.78■□□□□ 0.92
TRA2A-202ENST00000392502 DMTNQ08495 405 aa20.78■□□□□ 0.92
TRA2A-202ENST00000392502 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.78■□□□□ 0.92
TRA2A-202ENST00000392502 PANK3Q9H999 370 aa20.78■□□□□ 0.92
TRA2A-202ENST00000392502 MROH1Q8NDA8 1641 aa20.78■□□□□ 0.92
TRA2A-202ENST00000392502 KIDINS220Q9ULH0 1771 aa20.77■□□□□ 0.92
TRA2A-202ENST00000392502 PDE3BQ13370 1112 aa20.77■□□□□ 0.91
TRA2A-202ENST00000392502 CC2D1BQ5T0F9 858 aaKnown RBP20.77■□□□□ 0.91
TRA2A-202ENST00000392502 KANK1Q14678 1352 aa20.77■□□□□ 0.91
TRA2A-202ENST00000392502 KIF20AO95235 890 aa20.76■□□□□ 0.91
TRA2A-202ENST00000392502 TMF1P82094 1093 aa20.76■□□□□ 0.91
TRA2A-202ENST00000392502 RCAN3Q9UKA8 241 aa20.76■□□□□ 0.91
TRA2A-202ENST00000392502 ZNF518AQ6AHZ1 1483 aa20.75■□□□□ 0.91
TRA2A-202ENST00000392502 UGGT1Q9NYU2 1555 aa20.75■□□□□ 0.91
TRA2A-202ENST00000392502 TAF3Q5VWG9 929 aa20.75■□□□□ 0.91
TRA2A-202ENST00000392502 MAP3K4Q9Y6R4 1608 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms