RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 MYO5CQ9NQX4 1742 aa18.13■□□□□ 0.49
CCDC57-203ENST00000392343 ARHGEF5Q12774 1597 aa18.13■□□□□ 0.49
CCDC57-203ENST00000392343 SEC24BO95487 1268 aa18.13■□□□□ 0.49
CCDC57-203ENST00000392343 INSRP06213 1382 aa18.12■□□□□ 0.49
CCDC57-203ENST00000392343 CDC42BPBQ9Y5S2 1711 aa18.12■□□□□ 0.49
CCDC57-203ENST00000392343 RSPH4AQ5TD94 716 aa18.1■□□□□ 0.49
CCDC57-203ENST00000392343 EIF5BO60841 1220 aaKnown RBP18.09■□□□□ 0.49
CCDC57-203ENST00000392343 NEUROD2Q15784 382 aa18.09■□□□□ 0.49
CCDC57-203ENST00000392343 PANK1Q8TE04 598 aa18.09■□□□□ 0.49
CCDC57-203ENST00000392343 COG6Q9Y2V7 657 aa18.09■□□□□ 0.49
CCDC57-203ENST00000392343 NUP160Q12769 1436 aa18.09■□□□□ 0.49
CCDC57-203ENST00000392343 SLKQ9H2G2 1235 aaPredicted RBP18.09■□□□□ 0.49
CCDC57-203ENST00000392343 ARHGAP5Q13017 1502 aa18.08■□□□□ 0.49
CCDC57-203ENST00000392343 CANXP27824 592 aaKnown RBP18.08■□□□□ 0.48
CCDC57-203ENST00000392343 TRMT2AQ8IZ69 625 aaKnown RBP18.06■□□□□ 0.48
CCDC57-203ENST00000392343 USP19O94966 1318 aa18.05■□□□□ 0.48
CCDC57-203ENST00000392343 ARXQ96QS3 562 aa18.05■□□□□ 0.48
CCDC57-203ENST00000392343 POGKQ9P215 609 aa18.05■□□□□ 0.48
CCDC57-203ENST00000392343 TNNT2P45379 298 aaPredicted RBP18.05■□□□□ 0.48
CCDC57-203ENST00000392343 RRP7AQ9Y3A4 280 aaKnown RBP18.04■□□□□ 0.48
CCDC57-203ENST00000392343 LAMC1P11047 1609 aa18.04■□□□□ 0.48
CCDC57-203ENST00000392343 EIF2AK4Q9P2K8 1649 aaKnown RBP18.03■□□□□ 0.48
CCDC57-203ENST00000392343 NKTRP30414 1462 aaKnown RBP18.03■□□□□ 0.48
CCDC57-203ENST00000392343 PREX2Q70Z35 1606 aa18.02■□□□□ 0.48
CCDC57-203ENST00000392343 TNNQ9UQP3 1299 aa18.02■□□□□ 0.48
CCDC57-203ENST00000392343 UNC13BO14795 1591 aa18.02■□□□□ 0.48
CCDC57-203ENST00000392343 E9PSI1 815 aa18.02■□□□□ 0.48
CCDC57-203ENST00000392343 BCL2L13Q9BXK5 485 aa18.02■□□□□ 0.48
CCDC57-203ENST00000392343 CDCA8Q53HL2 280 aa18.01■□□□□ 0.47
CCDC57-203ENST00000392343 SPRYD3Q8NCJ5 442 aa18.01■□□□□ 0.47
CCDC57-203ENST00000392343 ASXL1Q8IXJ9 1541 aa18■□□□□ 0.47
CCDC57-203ENST00000392343 TTC37Q6PGP7 1564 aa18■□□□□ 0.47
CCDC57-203ENST00000392343 CLUAP1Q96AJ1 413 aa18■□□□□ 0.47
CCDC57-203ENST00000392343 EIF3AQ14152 1382 aaKnown RBP18■□□□□ 0.47
CCDC57-203ENST00000392343 CARD14Q9BXL6 1004 aa18■□□□□ 0.47
CCDC57-203ENST00000392343 CENPJQ9HC77 1338 aaPredicted RBP17.99■□□□□ 0.47
CCDC57-203ENST00000392343 IQGAP3Q86VI3 1631 aa17.99■□□□□ 0.47
CCDC57-203ENST00000392343 CFAP70Q5T0N1 1121 aa17.98■□□□□ 0.47
CCDC57-203ENST00000392343 PIK3C2GO75747 1445 aa17.97■□□□□ 0.47
CCDC57-203ENST00000392343 WWC1Q8IX03 1113 aa17.97■□□□□ 0.47
CCDC57-203ENST00000392343 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCDC57-203ENST00000392343 CGNL1Q0VF96 1302 aa17.95■□□□□ 0.46
CCDC57-203ENST00000392343 SCAF11Q99590 1463 aaKnown RBP17.95■□□□□ 0.46
CCDC57-203ENST00000392343 RNF17Q9BXT8 1623 aaKnown RBP17.95■□□□□ 0.46
CCDC57-203ENST00000392343 AFAP1Q8N556 730 aa17.95■□□□□ 0.46
CCDC57-203ENST00000392343 PCDHB15Q9Y5E8 787 aa17.95■□□□□ 0.46
CCDC57-203ENST00000392343 RLBP1P12271 317 aa17.94■□□□□ 0.46
CCDC57-203ENST00000392343 PDE3AQ14432 1141 aa17.93■□□□□ 0.46
CCDC57-203ENST00000392343 MADDQ8WXG6 1647 aa17.93■□□□□ 0.46
CCDC57-203ENST00000392343 BECN1Q14457 450 aa17.93■□□□□ 0.46
CCDC57-203ENST00000392343 ATP10AO60312 1499 aa17.93■□□□□ 0.46
CCDC57-203ENST00000392343 MAST1Q9Y2H9 1570 aa17.93■□□□□ 0.46
CCDC57-203ENST00000392343 DUOX2Q9NRD8 1548 aa17.92■□□□□ 0.46
CCDC57-203ENST00000392343 SYNMO15061 1565 aa17.92■□□□□ 0.46
CCDC57-203ENST00000392343 IQGAP1P46940 1657 aa17.92■□□□□ 0.46
CCDC57-203ENST00000392343 MAPK8IP3Q9UPT6 1336 aa17.91■□□□□ 0.46
CCDC57-203ENST00000392343 CLASP1Q7Z460 1538 aa17.91■□□□□ 0.46
CCDC57-203ENST00000392343 PDZRN3Q9UPQ7 1066 aa17.9■□□□□ 0.46
CCDC57-203ENST00000392343 TRAPPC8Q9Y2L5 1435 aa17.9■□□□□ 0.46
CCDC57-203ENST00000392343 RARSP54136 660 aaKnown RBP17.89■□□□□ 0.46
CCDC57-203ENST00000392343 MYOM1P52179 1685 aa17.89■□□□□ 0.45
CCDC57-203ENST00000392343 GZF1Q9H116 711 aaPredicted RBP17.89■□□□□ 0.45
CCDC57-203ENST00000392343 ADGRF5Q8IZF2 1346 aa17.89■□□□□ 0.45
CCDC57-203ENST00000392343 TCP11L2Q8N4U5 519 aa17.89■□□□□ 0.45
CCDC57-203ENST00000392343 ABCC2Q92887 1545 aa17.88■□□□□ 0.45
CCDC57-203ENST00000392343 EFCAB2Q5VUJ9 269 aa17.88■□□□□ 0.45
CCDC57-203ENST00000392343 TBC1D2Q9BYX2 928 aa17.88■□□□□ 0.45
CCDC57-203ENST00000392343 PLXNC1O60486 1568 aa17.88■□□□□ 0.45
CCDC57-203ENST00000392343 MORC1Q86VD1 984 aa17.87■□□□□ 0.45
CCDC57-203ENST00000392343 FAM43AQ8N2R8 423 aa17.87■□□□□ 0.45
CCDC57-203ENST00000392343 SPAG9O60271 1321 aaKnown RBP17.87■□□□□ 0.45
CCDC57-203ENST00000392343 UPF2Q9HAU5 1272 aaKnown RBP17.87■□□□□ 0.45
CCDC57-203ENST00000392343 NPC1L1Q9UHC9 1359 aa17.86■□□□□ 0.45
CCDC57-203ENST00000392343 SLC12A5Q9H2X9 1139 aa17.86■□□□□ 0.45
CCDC57-203ENST00000392343 ANTXR1Q9H6X2 564 aa17.86■□□□□ 0.45
CCDC57-203ENST00000392343 CHGAP10645 457 aaKnown RBP17.85■□□□□ 0.45
CCDC57-203ENST00000392343 RRAGDQ9NQL2 400 aaPredicted RBP17.85■□□□□ 0.45
CCDC57-203ENST00000392343 NLRP1Q9C000 1473 aa17.84■□□□□ 0.45
CCDC57-203ENST00000392343 KIF3BO15066 747 aa17.84■□□□□ 0.45
CCDC57-203ENST00000392343 PMFBP1Q8TBY8 1022 aa17.84■□□□□ 0.45
CCDC57-203ENST00000392343 TBC1D32Q96NH3 1257 aa17.84■□□□□ 0.45
CCDC57-203ENST00000392343 ERVK-7P63135 1459 aa17.84■□□□□ 0.45
CCDC57-203ENST00000392343 TRAK1Q9UPV9 953 aa17.84■□□□□ 0.45
CCDC57-203ENST00000392343 CLTCL1P53675 1640 aa17.83■□□□□ 0.45
CCDC57-203ENST00000392343 SCAPERQ9BY12 1400 aa17.83■□□□□ 0.45
CCDC57-203ENST00000392343 VIRMAQ69YN4 1812 aaKnown RBP17.83■□□□□ 0.44
CCDC57-203ENST00000392343 KDM5AP29375 1690 aaKnown RBP17.83■□□□□ 0.44
CCDC57-203ENST00000392343 RUNDC1Q96C34 613 aa17.82■□□□□ 0.44
CCDC57-203ENST00000392343 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
CCDC57-203ENST00000392343 MFAP1P55081 439 aaKnown RBP17.81■□□□□ 0.44
CCDC57-203ENST00000392343 SPHKAPQ2M3C7 1700 aa17.81■□□□□ 0.44
CCDC57-203ENST00000392343 UGGT1Q9NYU2 1555 aa17.81■□□□□ 0.44
CCDC57-203ENST00000392343 MTHFSP49914 203 aa17.81■□□□□ 0.44
CCDC57-203ENST00000392343 NSD3Q9BZ95 1437 aa17.8■□□□□ 0.44
CCDC57-203ENST00000392343 ERCC6L2Q5T890 1561 aa17.8■□□□□ 0.44
CCDC57-203ENST00000392343 PLCH2O75038 1416 aa17.79■□□□□ 0.44
CCDC57-203ENST00000392343 CEP152O94986 1710 aa17.79■□□□□ 0.44
CCDC57-203ENST00000392343 PANK2Q9BZ23 570 aa17.79■□□□□ 0.44
CCDC57-203ENST00000392343 RWDD1Q9H446 243 aaPredicted RBP17.79■□□□□ 0.44
CCDC57-203ENST00000392343 TRPM2O94759 1503 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms