RNA–Protein interactions for RNA: ENST00000392202.7

PIKFYVE-203, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 2,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-203ENST00000392202 KIAA1210Q9ULL0 1709 aa31.38■■■□□ 2.61
PIKFYVE-203ENST00000392202 A2ML1A8K2U0 1454 aa31.37■■■□□ 2.61
PIKFYVE-203ENST00000392202 LAMC1P11047 1609 aa31.36■■■□□ 2.61
PIKFYVE-203ENST00000392202 UBR1Q8IWV7 1749 aa31.34■■■□□ 2.61
PIKFYVE-203ENST00000392202 ZFYVE9O95405 1425 aa31.32■■■□□ 2.6
PIKFYVE-203ENST00000392202 GPRASP1Q5JY77 1395 aa31.32■■■□□ 2.6
PIKFYVE-203ENST00000392202 MYO3AQ8NEV4 1616 aa31.31■■■□□ 2.6
PIKFYVE-203ENST00000392202 ADGRF5Q8IZF2 1346 aa31.31■■■□□ 2.6
PIKFYVE-203ENST00000392202 STAG3Q9UJ98 1225 aa31.31■■■□□ 2.6
PIKFYVE-203ENST00000392202 ROCK2O75116 1388 aaKnown RBP31.29■■■□□ 2.6
PIKFYVE-203ENST00000392202 PIK3C2GO75747 1445 aa31.28■■■□□ 2.6
PIKFYVE-203ENST00000392202 EIF4G2P78344 907 aaKnown RBP eCLIP31.27■■■□□ 2.6
PIKFYVE-203ENST00000392202 PTPRMP28827 1452 aa31.27■■■□□ 2.6
PIKFYVE-203ENST00000392202 VGFO15240 615 aaPredicted RBP31.25■■■□□ 2.59
PIKFYVE-203ENST00000392202 CARD11Q9BXL7 1154 aa31.24■■■□□ 2.59
PIKFYVE-203ENST00000392202 HSPA5P11021 654 aaKnown RBP31.23■■■□□ 2.59
PIKFYVE-203ENST00000392202 RIMS2Q9UQ26 1411 aa31.23■■■□□ 2.59
PIKFYVE-203ENST00000392202 USP47Q96K76 1375 aa31.22■■■□□ 2.59
PIKFYVE-203ENST00000392202 NBPF1Q3BBV0 1214 aa31.22■■■□□ 2.59
PIKFYVE-203ENST00000392202 SETBP1Q9Y6X0 1596 aa31.2■■■□□ 2.58
PIKFYVE-203ENST00000392202 IQGAP1P46940 1657 aa31.19■■■□□ 2.58
PIKFYVE-203ENST00000392202 ZNF142P52746 1687 aaPredicted RBP31.19■■■□□ 2.58
PIKFYVE-203ENST00000392202 CEP170BQ9Y4F5 1589 aaPredicted RBP31.18■■■□□ 2.58
PIKFYVE-203ENST00000392202 SETD1BQ9UPS6 1966 aaKnown RBP31.17■■■□□ 2.58
PIKFYVE-203ENST00000392202 KDM4FA0A1W2PPD8 638 aa31.16■■■□□ 2.58
PIKFYVE-203ENST00000392202 HIRIP3Q9BW71 556 aaPredicted RBP31.15■■■□□ 2.58
PIKFYVE-203ENST00000392202 TMEM2Q9UHN6 1383 aa31.15■■■□□ 2.58
PIKFYVE-203ENST00000392202 CFAP70Q5T0N1 1121 aa31.15■■■□□ 2.58
PIKFYVE-203ENST00000392202 NUTM2DQ5VT03 806 aaPredicted RBP31.15■■■□□ 2.58
PIKFYVE-203ENST00000392202 C14orf93Q9H972 538 aaKnown RBP31.14■■■□□ 2.58
PIKFYVE-203ENST00000392202 SLIT1O75093 1534 aa31.13■■■□□ 2.57
PIKFYVE-203ENST00000392202 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.13■■■□□ 2.57
PIKFYVE-203ENST00000392202 ARHGAP23Q9P227 1491 aa31.12■■■□□ 2.57
PIKFYVE-203ENST00000392202 ADGRB1O14514 1584 aa31.11■■■□□ 2.57
PIKFYVE-203ENST00000392202 SCAF11Q99590 1463 aaKnown RBP31.1■■■□□ 2.57
PIKFYVE-203ENST00000392202 HDGFP51858 240 aaKnown RBP31.09■■■□□ 2.57
PIKFYVE-203ENST00000392202 POLR1AO95602 1720 aaPredicted RBP31.09■■■□□ 2.57
PIKFYVE-203ENST00000392202 NRXN3Q9Y4C0 1643 aa31.06■■■□□ 2.56
PIKFYVE-203ENST00000392202 ALKQ9UM73 1620 aa31.06■■■□□ 2.56
PIKFYVE-203ENST00000392202 SETD1AO15047 1707 aaKnown RBP31.05■■■□□ 2.56
PIKFYVE-203ENST00000392202 THEMISQ8N1K5 641 aaPredicted RBP31.05■■■□□ 2.56
PIKFYVE-203ENST00000392202 ASXL1Q8IXJ9 1541 aa31.04■■■□□ 2.56
PIKFYVE-203ENST00000392202 ST20-MTHFSA0A0A6YYL1 179 aa31.01■■■□□ 2.55
PIKFYVE-203ENST00000392202 EIF3AQ14152 1382 aaKnown RBP30.98■■■□□ 2.55
PIKFYVE-203ENST00000392202 PLEKHG1Q9ULL1 1385 aa30.98■■■□□ 2.55
PIKFYVE-203ENST00000392202 LTKP29376 864 aa30.96■■■□□ 2.55
PIKFYVE-203ENST00000392202 SENP3Q9H4L4 574 aaPredicted RBP30.96■■■□□ 2.55
PIKFYVE-203ENST00000392202 EID1Q9Y6B2 187 aa30.96■■■□□ 2.55
PIKFYVE-203ENST00000392202 TXNDC2Q86VQ3 553 aa30.94■■■□□ 2.54
PIKFYVE-203ENST00000392202 TMEM132EQ6IEE7 984 aa30.93■■■□□ 2.54
PIKFYVE-203ENST00000392202 ARHGEF28Q8N1W1 1705 aaKnown RBP30.93■■■□□ 2.54
PIKFYVE-203ENST00000392202 WASHC2AQ641Q2 1341 aa30.93■■■□□ 2.54
PIKFYVE-203ENST00000392202 DIEXFQ68CQ4 756 aaKnown RBP30.93■■■□□ 2.54
PIKFYVE-203ENST00000392202 C11orf95C9JLR9 678 aaPredicted RBP30.92■■■□□ 2.54
PIKFYVE-203ENST00000392202 CCDC7Q96M83 1385 aa30.92■■■□□ 2.54
PIKFYVE-203ENST00000392202 TESK2Q96S53 571 aa30.9■■■□□ 2.54
PIKFYVE-203ENST00000392202 ADAMTS13Q76LX8 1427 aa30.89■■■□□ 2.54
PIKFYVE-203ENST00000392202 YTHDC2Q9H6S0 1430 aaKnown RBP30.88■■■□□ 2.53
PIKFYVE-203ENST00000392202 MED14O60244 1454 aa30.88■■■□□ 2.53
PIKFYVE-203ENST00000392202 KIF7Q2M1P5 1343 aa30.87■■■□□ 2.53
PIKFYVE-203ENST00000392202 DIP2AQ14689 1571 aa30.87■■■□□ 2.53
PIKFYVE-203ENST00000392202 TRAK1Q9UPV9 953 aa30.85■■■□□ 2.53
PIKFYVE-203ENST00000392202 QRICH2Q9H0J4 1663 aa30.85■■■□□ 2.53
PIKFYVE-203ENST00000392202 KNDC1Q76NI1 1749 aa30.84■■■□□ 2.53
PIKFYVE-203ENST00000392202 SBNO2Q9Y2G9 1366 aa30.83■■■□□ 2.53
PIKFYVE-203ENST00000392202 DLC1Q96QB1 1528 aa30.83■■■□□ 2.53
PIKFYVE-203ENST00000392202 LRPPRCP42704 1394 aaKnown RBP30.83■■■□□ 2.53
PIKFYVE-203ENST00000392202 METP08581 1390 aa30.81■■■□□ 2.52
PIKFYVE-203ENST00000392202 CENPJQ9HC77 1338 aaPredicted RBP30.81■■■□□ 2.52
PIKFYVE-203ENST00000392202 DDX10Q13206 875 aaKnown RBP30.8■■■□□ 2.52
PIKFYVE-203ENST00000392202 BCANQ96GW7 911 aa30.8■■■□□ 2.52
PIKFYVE-203ENST00000392202 ANKLE2Q86XL3 938 aa30.8■■■□□ 2.52
PIKFYVE-203ENST00000392202 DISP3Q9P2K9 1392 aa30.78■■■□□ 2.52
PIKFYVE-203ENST00000392202 SLC24A1O60721 1099 aa30.78■■■□□ 2.52
PIKFYVE-203ENST00000392202 TMF1P82094 1093 aa30.78■■■□□ 2.52
PIKFYVE-203ENST00000392202 ABCC11Q96J66 1382 aa30.77■■■□□ 2.52
PIKFYVE-203ENST00000392202 TBX22Q9Y458 520 aa30.76■■■□□ 2.51
PIKFYVE-203ENST00000392202 TECPR2O15040 1411 aa30.75■■■□□ 2.51
PIKFYVE-203ENST00000392202 STK26Q9P289 416 aa30.75■■■□□ 2.51
PIKFYVE-203ENST00000392202 CPS1P31327 1500 aa30.74■■■□□ 2.51
PIKFYVE-203ENST00000392202 LMTK3Q96Q04 1460 aa30.74■■■□□ 2.51
PIKFYVE-203ENST00000392202 SLC26A8Q96RN1 970 aa30.71■■■□□ 2.51
PIKFYVE-203ENST00000392202 NPHP4O75161 1426 aaPredicted RBP30.69■■■□□ 2.5
PIKFYVE-203ENST00000392202 HSPA2P54652 639 aa30.68■■■□□ 2.5
PIKFYVE-203ENST00000392202 SIRT1Q96EB6 747 aa30.68■■■□□ 2.5
PIKFYVE-203ENST00000392202 CDCA8Q53HL2 280 aa30.67■■■□□ 2.5
PIKFYVE-203ENST00000392202 NCKAP5LQ9HCH0 1330 aa30.67■■■□□ 2.5
PIKFYVE-203ENST00000392202 PIK3R4Q99570 1358 aa30.67■■■□□ 2.5
PIKFYVE-203ENST00000392202 FAM135BQ49AJ0 1406 aa30.67■■■□□ 2.5
PIKFYVE-203ENST00000392202 PTPRUQ92729 1446 aa30.67■■■□□ 2.5
PIKFYVE-203ENST00000392202 XRN1Q8IZH2 1706 aaKnown RBP30.66■■■□□ 2.5
PIKFYVE-203ENST00000392202 PRAM1Q96QH2 718 aa30.66■■■□□ 2.5
PIKFYVE-203ENST00000392202 POLR3GLQ9BT43 218 aa30.66■■■□□ 2.5
PIKFYVE-203ENST00000392202 TULP4Q9NRJ4 1543 aa30.64■■■□□ 2.5
PIKFYVE-203ENST00000392202 POGKQ9P215 609 aa30.63■■■□□ 2.49
PIKFYVE-203ENST00000392202 CHD2O14647 1828 aaKnown RBP30.61■■■□□ 2.49
PIKFYVE-203ENST00000392202 MYOM1P52179 1685 aa30.61■■■□□ 2.49
PIKFYVE-203ENST00000392202 PTCH1Q13635 1447 aa30.6■■■□□ 2.49
PIKFYVE-203ENST00000392202 PLEKHH1Q9ULM0 1364 aa30.59■■■□□ 2.49
PIKFYVE-203ENST00000392202 ROBO2Q9HCK4 1378 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms