RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PCDHB8Q9UN66 801 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 JAG2Q9Y219 1238 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 RNF114Q9Y508 228 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 COL17A1Q9UMD9 1497 aaPredicted RBP0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 NCANO14594 1321 aa0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 TTC24A2A3L6 582 aaPredicted RBP0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 KRTAP9-7A8MTY7 169 aa0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 PRRG2O14669 202 aa0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 ARHGEF15O94989 841 aa0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 PSEN1P49768 467 aa0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 MAP3K10Q02779 954 aa0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 ALYREFQ86V81 257 aaKnown RBP0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 ANKLE1Q8NAG6 615 aa0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 EMID1Q96A84 441 aaPredicted RBP0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 ZFRQ96KR1 1074 aaKnown RBP0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 PKD2L1Q9P0L9 805 aa0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 RABGEF1Q9UJ41 708 aa0.39□□□□□ -2.35
TRAJ28-201ENST00000390509 KDM4FA0A1W2PPD8 638 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 B8ZZF3 427 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 RNF223E7ERA6 249 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 ZNF865P0CJ78 1059 aaPredicted RBP0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 PYGBP11216 843 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 IRAK1P51617 712 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 NUBP1P53384 320 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 PPP4CP60510 307 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 FBLN7Q53RD9 439 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 LIAT1Q6ZQX7 453 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 BEND7Q8N7W2 519 aaPredicted RBP0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 NKX2-3Q8TAU0 364 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 ZNF516Q92618 1163 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 CNTNAP3BQ96NU0 1288 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 CNTNAP3Q9BZ76 1288 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 CABP2Q9NPB3 220 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 ENAMQ9NRM1 1142 aa0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 ZBTB47Q9UFB7 747 aaPredicted RBP0.38□□□□□ -2.35
TRAJ28-201ENST00000390509 KRBA1A5PL33 1030 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 PPP1R3GB7ZBB8 358 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 GSC2O15499 205 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 SUV39H1O43463 412 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 HYAL3O43820 417 aaPredicted RBP0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 SMPD1P17405 629 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 BUD31P41223 144 aaPredicted RBP0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 KRT76Q01546 638 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 PDAP1Q13442 181 aaKnown RBP0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 FAM98CQ17RN3 349 aaKnown RBP0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 KRTAP5-4Q6L8H1 288 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 KRTAP5-1Q6L8H4 278 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 SPOCD1Q6ZMY3 1216 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 ZNF454Q8N9F8 522 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 TTC13Q8NBP0 860 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 WHAMMQ8TF30 809 aa0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 PTCD2Q8WV60 388 aaKnown RBP0.37□□□□□ -2.35
TRAJ28-201ENST00000390509 C2orf72A6NCS6 295 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 SPDYE4A6NLX3 237 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 KIF3CO14782 793 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 TBC1D12O60347 775 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 ZPR1O75312 459 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 C8AP07357 584 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 BMP1P13497 986 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 ELNP15502 786 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 TAL1P17542 331 aaPredicted RBP0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 RPIAP49247 311 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 KRTAP5-11Q6L8G4 156 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 LILRA6Q6PI73 481 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 DBX2Q6ZNG2 339 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 TRIM46Q7Z4K8 759 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 ZDHHC13Q8IUH4 622 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 MIER1Q8N108 512 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 SNIP1Q8TAD8 396 aaKnown RBP0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 NECTIN2Q92692 538 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 COL25A1Q9BXS0 654 aaPredicted RBP0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 KRTAP4-4Q9BYR3 166 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 SEPT9Q9UHD8 586 aaPredicted RBP0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 CIZ1Q9ULV3 898 aaPredicted RBP0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 CNTNAP5Q8WYK1 1306 aa0.36□□□□□ -2.35
TRAJ28-201ENST00000390509 C1QTNF9BB2RNN3 333 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 OVOL3O00110 214 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 WNT7AO00755 349 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 DYRK3O43781 588 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 ONECUT3O60422 494 aaPredicted RBP0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 PPFIA3O75145 1194 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 CD2BP2O95400 341 aaKnown RBP0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 ADAMTS2O95450 1211 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 S1PR4O95977 384 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 CELA2BP08218 269 aaPredicted RBP0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 FOSBP53539 338 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 KRTAP10-7P60409 375 aaPredicted RBP0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 COPS2P61201 443 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 SRSF11Q05519 484 aaKnown RBP0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 SCARF1Q14162 830 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 DOC2BQ14184 412 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 RSPO4Q2I0M5 234 aaPredicted RBP0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 PROX2Q3B8N5 592 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 RNFT1Q5M7Z0 435 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 LYPD4Q6UWN0 246 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 PLCD3Q8N3E9 789 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 POU5F2Q8N7G0 328 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 NEDD1Q8NHV4 660 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 TMC2Q8TDI7 906 aa0.35□□□□□ -2.35
TRAJ28-201ENST00000390509 HPS1Q92902 700 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms