RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 COG6Q9Y2V7 657 aa15.92■□□□□ 0.14
ABCA3-202ENST00000382381 KDM4AO75164 1064 aa15.91■□□□□ 0.14
ABCA3-202ENST00000382381 RAPGEF3O95398 923 aa15.91■□□□□ 0.14
ABCA3-202ENST00000382381 APPP05067 770 aa15.9■□□□□ 0.14
ABCA3-202ENST00000382381 PSME1Q06323 249 aa15.9■□□□□ 0.14
ABCA3-202ENST00000382381 ARHGAP5Q13017 1502 aa15.9■□□□□ 0.14
ABCA3-202ENST00000382381 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
ABCA3-202ENST00000382381 EXOC6Q8TAG9 804 aa15.89■□□□□ 0.13
ABCA3-202ENST00000382381 PANK3Q9H999 370 aa15.89■□□□□ 0.13
ABCA3-202ENST00000382381 DHX16O60231 1041 aaKnown RBP15.89■□□□□ 0.13
ABCA3-202ENST00000382381 ATF3P18847 181 aa15.89■□□□□ 0.13
ABCA3-202ENST00000382381 PTMSP20962 102 aa15.88■□□□□ 0.13
ABCA3-202ENST00000382381 NUTM2GQ5VZR2 741 aa15.88■□□□□ 0.13
ABCA3-202ENST00000382381 PCMTD1Q96MG8 357 aaPredicted RBP15.88■□□□□ 0.13
ABCA3-202ENST00000382381 BECN2A8MW95 431 aa15.88■□□□□ 0.13
ABCA3-202ENST00000382381 ST20-MTHFSA0A0A6YYL1 179 aa15.88■□□□□ 0.13
ABCA3-202ENST00000382381 AKAP17AQ02040 695 aaKnown RBP15.87■□□□□ 0.13
ABCA3-202ENST00000382381 ZNF428Q96B54 188 aa15.87■□□□□ 0.13
ABCA3-202ENST00000382381 GOLGA6L19H0YKK7 550 aa15.86■□□□□ 0.13
ABCA3-202ENST00000382381 CSPP1Q1MSJ5 1256 aa15.86■□□□□ 0.13
ABCA3-202ENST00000382381 MTMR7Q9Y216 660 aa15.86■□□□□ 0.13
ABCA3-202ENST00000382381 CRBNQ96SW2 442 aa15.86■□□□□ 0.13
ABCA3-202ENST00000382381 NLRP13Q86W25 1043 aa15.85■□□□□ 0.13
ABCA3-202ENST00000382381 POLA1P09884 1462 aaPredicted RBP15.85■□□□□ 0.13
ABCA3-202ENST00000382381 C1orf141Q5JVX7 400 aa15.84■□□□□ 0.13
ABCA3-202ENST00000382381 PIP4K2BP78356 416 aa15.84■□□□□ 0.13
ABCA3-202ENST00000382381 TEFQ10587 303 aa15.84■□□□□ 0.13
ABCA3-202ENST00000382381 TSR1Q2NL82 804 aaKnown RBP15.84■□□□□ 0.13
ABCA3-202ENST00000382381 C9orf78Q9NZ63 289 aaPredicted RBP15.84■□□□□ 0.13
ABCA3-202ENST00000382381 DIAPH3Q9NSV4 1193 aa15.83■□□□□ 0.13
ABCA3-202ENST00000382381 TCEAL9Q9UHQ7 104 aa15.83■□□□□ 0.12
ABCA3-202ENST00000382381 KIF15Q9NS87 1388 aa15.83■□□□□ 0.12
ABCA3-202ENST00000382381 PDE4AP27815 886 aa15.82■□□□□ 0.12
ABCA3-202ENST00000382381 FYB1O15117 783 aa15.82■□□□□ 0.12
ABCA3-202ENST00000382381 TMEM132EQ6IEE7 984 aa15.82■□□□□ 0.12
ABCA3-202ENST00000382381 SYNJ2O15056 1496 aa15.82■□□□□ 0.12
ABCA3-202ENST00000382381 APAF1O14727 1248 aa15.82■□□□□ 0.12
ABCA3-202ENST00000382381 HSP90AA2PQ14568 343 aaPredicted RBP15.81■□□□□ 0.12
ABCA3-202ENST00000382381 TXNDC2Q86VQ3 553 aa15.81■□□□□ 0.12
ABCA3-202ENST00000382381 ANO2Q9NQ90 1003 aa15.81■□□□□ 0.12
ABCA3-202ENST00000382381 PHF14O94880 888 aa15.81■□□□□ 0.12
ABCA3-202ENST00000382381 TIMELESSQ9UNS1 1208 aa15.81■□□□□ 0.12
ABCA3-202ENST00000382381 COG3Q96JB2 828 aa15.81■□□□□ 0.12
ABCA3-202ENST00000382381 HDAC5Q9UQL6 1122 aa15.81■□□□□ 0.12
ABCA3-202ENST00000382381 LMOD3Q0VAK6 560 aa15.8■□□□□ 0.12
ABCA3-202ENST00000382381 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
ABCA3-202ENST00000382381 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
ABCA3-202ENST00000382381 TRIM34Q9BYJ4 488 aa15.8■□□□□ 0.12
ABCA3-202ENST00000382381 SYNE3Q6ZMZ3 975 aa15.8■□□□□ 0.12
ABCA3-202ENST00000382381 VPS37DQ86XT2 251 aa15.8■□□□□ 0.12
ABCA3-202ENST00000382381 KIF3AQ9Y496 699 aa15.79■□□□□ 0.12
ABCA3-202ENST00000382381 CTDP1Q9Y5B0 961 aaPredicted RBP15.79■□□□□ 0.12
ABCA3-202ENST00000382381 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
ABCA3-202ENST00000382381 VSIG10Q8N0Z9 540 aa15.79■□□□□ 0.12
ABCA3-202ENST00000382381 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.79■□□□□ 0.12
ABCA3-202ENST00000382381 USP35Q9P2H5 1018 aa15.79■□□□□ 0.12
ABCA3-202ENST00000382381 VPS37CA5D8V6 355 aaPredicted RBP15.79■□□□□ 0.12
ABCA3-202ENST00000382381 NUTM2BA6NNL0 878 aaPredicted RBP15.78■□□□□ 0.12
ABCA3-202ENST00000382381 NUTM2EB1AL46 878 aaPredicted RBP15.78■□□□□ 0.12
ABCA3-202ENST00000382381 PROSER2Q86WR7 435 aaPredicted RBP15.78■□□□□ 0.12
ABCA3-202ENST00000382381 NUTM2AQ8IVF1 878 aaPredicted RBP15.78■□□□□ 0.12
ABCA3-202ENST00000382381 AIMP1Q12904 312 aaKnown RBP15.78■□□□□ 0.12
ABCA3-202ENST00000382381 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
ABCA3-202ENST00000382381 CUX1P39880 1505 aa15.78■□□□□ 0.12
ABCA3-202ENST00000382381 BICD2Q8TD16 824 aa15.78■□□□□ 0.12
ABCA3-202ENST00000382381 EVC2Q86UK5 1308 aa15.77■□□□□ 0.12
ABCA3-202ENST00000382381 FAM177BA6PVY3 158 aa15.77■□□□□ 0.12
ABCA3-202ENST00000382381 UACAQ9BZF9 1416 aa15.77■□□□□ 0.12
ABCA3-202ENST00000382381 CPLX1O14810 134 aa15.77■□□□□ 0.12
ABCA3-202ENST00000382381 SCAPERQ9BY12 1400 aa15.77■□□□□ 0.12
ABCA3-202ENST00000382381 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.12
ABCA3-202ENST00000382381 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.11
ABCA3-202ENST00000382381 ZKSCAN2Q63HK3 967 aa15.77■□□□□ 0.11
ABCA3-202ENST00000382381 HMOX1P09601 288 aa15.76■□□□□ 0.11
ABCA3-202ENST00000382381 NFXL1Q6ZNB6 911 aa15.76■□□□□ 0.11
ABCA3-202ENST00000382381 MYOM3Q5VTT5 1437 aa15.76■□□□□ 0.11
ABCA3-202ENST00000382381 IFIT2P09913 472 aaKnown RBP15.76■□□□□ 0.11
ABCA3-202ENST00000382381 FAM13BQ9NYF5 915 aa15.76■□□□□ 0.11
ABCA3-202ENST00000382381 DDX11L8A8MPP1 907 aa15.75■□□□□ 0.11
ABCA3-202ENST00000382381 FAM161AQ3B820 660 aa15.75■□□□□ 0.11
ABCA3-202ENST00000382381 HOMER1Q86YM7 354 aa15.75■□□□□ 0.11
ABCA3-202ENST00000382381 NEXNQ0ZGT2 675 aa15.75■□□□□ 0.11
ABCA3-202ENST00000382381 FKBP5Q13451 457 aaPredicted RBP15.75■□□□□ 0.11
ABCA3-202ENST00000382381 TRIM29Q14134 588 aa15.75■□□□□ 0.11
ABCA3-202ENST00000382381 ESCO1Q5FWF5 840 aa15.75■□□□□ 0.11
ABCA3-202ENST00000382381 ZNF771Q7L3S4 317 aaPredicted RBP15.74■□□□□ 0.11
ABCA3-202ENST00000382381 NOL10Q9BSC4 688 aaKnown RBP15.74■□□□□ 0.11
ABCA3-202ENST00000382381 TPM1P09493 284 aa15.73■□□□□ 0.11
ABCA3-202ENST00000382381 NEUROD6Q96NK8 337 aa15.73■□□□□ 0.11
ABCA3-202ENST00000382381 LNPKQ9C0E8 428 aa15.73■□□□□ 0.11
ABCA3-202ENST00000382381 NAP1L1P55209 391 aaKnown RBP15.73■□□□□ 0.11
ABCA3-202ENST00000382381 KRI1Q8N9T8 703 aaKnown RBP15.73■□□□□ 0.11
ABCA3-202ENST00000382381 TPM2P07951 284 aa15.73■□□□□ 0.11
ABCA3-202ENST00000382381 RIPK4P57078 832 aa15.72■□□□□ 0.11
ABCA3-202ENST00000382381 GSE1Q14687 1217 aa15.72■□□□□ 0.11
ABCA3-202ENST00000382381 CABP2Q9NPB3 220 aa15.72■□□□□ 0.11
ABCA3-202ENST00000382381 TTLL5Q6EMB2 1281 aa15.72■□□□□ 0.11
ABCA3-202ENST00000382381 CENPQQ7L2Z9 268 aaPredicted RBP15.72■□□□□ 0.11
ABCA3-202ENST00000382381 RRP1P56182 461 aaKnown RBP15.71■□□□□ 0.11
ABCA3-202ENST00000382381 ZKSCAN1P17029 563 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms