RNA–Protein interactions for RNA: ENST00000382254.5

CDH12-201, Transcript of cadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH12, Length 4,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-201ENST00000382254 RPRD2Q5VT52 1461 aaKnown RBP9.22□□□□□ -0.93
CDH12-201ENST00000382254 FAM13BQ9NYF5 915 aa9.21□□□□□ -0.93
CDH12-201ENST00000382254 KCNJ4P48050 445 aa9.21□□□□□ -0.94
CDH12-201ENST00000382254 FOXD4L6Q3SYB3 417 aaPredicted RBP9.21□□□□□ -0.94
CDH12-201ENST00000382254 FOXD4L3Q6VB84 417 aaPredicted RBP9.21□□□□□ -0.94
CDH12-201ENST00000382254 SPAG9O60271 1321 aaKnown RBP9.21□□□□□ -0.94
CDH12-201ENST00000382254 GOLGA6L4A6NEF3 574 aa9.2□□□□□ -0.94
CDH12-201ENST00000382254 PTPRGP23470 1445 aa9.2□□□□□ -0.94
CDH12-201ENST00000382254 C14orf37Q86TY3 774 aa9.2□□□□□ -0.94
CDH12-201ENST00000382254 NGEFQ8N5V2 710 aa9.2□□□□□ -0.94
CDH12-201ENST00000382254 DDX19BQ9UMR2 479 aa9.2□□□□□ -0.94
CDH12-201ENST00000382254 OS9Q13438 667 aaPredicted RBP9.2□□□□□ -0.94
CDH12-201ENST00000382254 ZRSR1Q15695 479 aaKnown RBP9.2□□□□□ -0.94
CDH12-201ENST00000382254 DRC7Q8IY82 874 aa9.2□□□□□ -0.94
CDH12-201ENST00000382254 WASHC2CQ9Y4E1 1318 aa9.2□□□□□ -0.94
CDH12-201ENST00000382254 GRIN2BQ13224 1484 aa9.19□□□□□ -0.94
CDH12-201ENST00000382254 SYAP1Q96A49 352 aaPredicted RBP9.19□□□□□ -0.94
CDH12-201ENST00000382254 RUNDC1Q96C34 613 aa9.19□□□□□ -0.94
CDH12-201ENST00000382254 ROCK1Q13464 1354 aa9.19□□□□□ -0.94
CDH12-201ENST00000382254 TROQ12816 1431 aaPredicted RBP9.19□□□□□ -0.94
CDH12-201ENST00000382254 PDE3AQ14432 1141 aa9.19□□□□□ -0.94
CDH12-201ENST00000382254 AMER1Q5JTC6 1135 aaPredicted RBP9.19□□□□□ -0.94
CDH12-201ENST00000382254 HECW1Q76N89 1606 aa9.19□□□□□ -0.94
CDH12-201ENST00000382254 HDGFL2Q7Z4V5 671 aaPredicted RBP9.19□□□□□ -0.94
CDH12-201ENST00000382254 ST18O60284 1047 aa9.19□□□□□ -0.94
CDH12-201ENST00000382254 TCP11L2Q8N4U5 519 aa9.19□□□□□ -0.94
CDH12-201ENST00000382254 C9orf84Q5VXU9 1444 aa9.18□□□□□ -0.94
CDH12-201ENST00000382254 MCM4P33991 863 aa9.17□□□□□ -0.94
CDH12-201ENST00000382254 TRIM6-TRIM34B2RNG4 842 aa9.17□□□□□ -0.94
CDH12-201ENST00000382254 TAOK2Q9UL54 1235 aa9.17□□□□□ -0.94
CDH12-201ENST00000382254 URB2Q14146 1524 aaKnown RBP9.17□□□□□ -0.94
CDH12-201ENST00000382254 CDK11BP21127 795 aaKnown RBP9.17□□□□□ -0.94
CDH12-201ENST00000382254 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
CDH12-201ENST00000382254 SLC4A10Q6U841 1118 aa9.16□□□□□ -0.94
CDH12-201ENST00000382254 SNAPC4Q5SXM2 1469 aa9.16□□□□□ -0.94
CDH12-201ENST00000382254 NASPP49321 788 aaPredicted RBP9.16□□□□□ -0.94
CDH12-201ENST00000382254 FGD1P98174 961 aa9.16□□□□□ -0.94
CDH12-201ENST00000382254 MCTP1Q6DN14 999 aa9.16□□□□□ -0.94
CDH12-201ENST00000382254 PKNOX2Q96KN3 472 aa9.16□□□□□ -0.94
CDH12-201ENST00000382254 CUL7Q14999 1698 aa9.16□□□□□ -0.94
CDH12-201ENST00000382254 R3HCC1Q9Y3T6 440 aaKnown RBP9.16□□□□□ -0.94
CDH12-201ENST00000382254 THOC2Q8NI27 1593 aaKnown RBP9.15□□□□□ -0.94
CDH12-201ENST00000382254 SLFN5Q08AF3 891 aa9.15□□□□□ -0.94
CDH12-201ENST00000382254 PLB1Q6P1J6 1458 aa9.15□□□□□ -0.94
CDH12-201ENST00000382254 MTHFSP49914 203 aa9.15□□□□□ -0.94
CDH12-201ENST00000382254 CFAP70Q5T0N1 1121 aa9.15□□□□□ -0.94
CDH12-201ENST00000382254 KIAA1211Q6ZU35 1233 aa9.15□□□□□ -0.94
CDH12-201ENST00000382254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.15□□□□□ -0.94
CDH12-201ENST00000382254 AFAP1Q8N556 730 aa9.15□□□□□ -0.94
CDH12-201ENST00000382254 TERF2IPQ9NYB0 399 aa9.15□□□□□ -0.94
CDH12-201ENST00000382254 RIPK4P57078 832 aa9.15□□□□□ -0.95
CDH12-201ENST00000382254 GRPEL1Q9HAV7 217 aa9.15□□□□□ -0.95
CDH12-201ENST00000382254 UGGT2Q9NYU1 1516 aa9.15□□□□□ -0.95
CDH12-201ENST00000382254 IQGAP2Q13576 1575 aa9.14□□□□□ -0.95
CDH12-201ENST00000382254 ESPNB1AK53 854 aa9.14□□□□□ -0.95
CDH12-201ENST00000382254 AAMPQ13685 434 aa9.14□□□□□ -0.95
CDH12-201ENST00000382254 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.14□□□□□ -0.95
CDH12-201ENST00000382254 NAP1L2Q9ULW6 460 aaPredicted RBP9.14□□□□□ -0.95
CDH12-201ENST00000382254 CFAP43Q8NDM7 1665 aa9.14□□□□□ -0.95
CDH12-201ENST00000382254 HMMRO75330 724 aa9.13□□□□□ -0.95
CDH12-201ENST00000382254 RTF1Q92541 710 aaKnown RBP9.13□□□□□ -0.95
CDH12-201ENST00000382254 CAMSAP2Q08AD1 1489 aa9.13□□□□□ -0.95
CDH12-201ENST00000382254 RBM10P98175 930 aaKnown RBP9.13□□□□□ -0.95
CDH12-201ENST00000382254 DUSP27Q5VZP5 1158 aa9.13□□□□□ -0.95
CDH12-201ENST00000382254 CAVIN1Q6NZI2 390 aaKnown RBP9.13□□□□□ -0.95
CDH12-201ENST00000382254 RNF214Q8ND24 703 aa9.13□□□□□ -0.95
CDH12-201ENST00000382254 TSR2Q969E8 191 aaKnown RBP9.13□□□□□ -0.95
CDH12-201ENST00000382254 EXOSC9Q06265 439 aaKnown RBP9.13□□□□□ -0.95
CDH12-201ENST00000382254 NUCB2P80303 420 aa9.12□□□□□ -0.95
CDH12-201ENST00000382254 TMEM132EQ6IEE7 984 aa9.12□□□□□ -0.95
CDH12-201ENST00000382254 RILPL2Q969X0 211 aa9.12□□□□□ -0.95
CDH12-201ENST00000382254 DHX29Q7Z478 1369 aaKnown RBP9.12□□□□□ -0.95
CDH12-201ENST00000382254 ERBINQ96RT1 1412 aa9.12□□□□□ -0.95
CDH12-201ENST00000382254 PHF14O94880 888 aa9.11□□□□□ -0.95
CDH12-201ENST00000382254 TBC1D2Q9BYX2 928 aa9.11□□□□□ -0.95
CDH12-201ENST00000382254 KIF16BQ96L93 1317 aa9.11□□□□□ -0.95
CDH12-201ENST00000382254 ARHGEF11O15085 1522 aa9.11□□□□□ -0.95
CDH12-201ENST00000382254 GOLGA6L6A8MZA4 724 aa9.11□□□□□ -0.95
CDH12-201ENST00000382254 NRDCO43847 1150 aa9.11□□□□□ -0.95
CDH12-201ENST00000382254 KIAA0586Q9BVV6 1533 aa9.1□□□□□ -0.95
CDH12-201ENST00000382254 GGNBP2Q9H3C7 697 aa9.1□□□□□ -0.95
CDH12-201ENST00000382254 EVC2Q86UK5 1308 aa9.1□□□□□ -0.95
CDH12-201ENST00000382254 IGHDP01880 384 aa9.1□□□□□ -0.95
CDH12-201ENST00000382254 DIAPH1O60610 1272 aaKnown RBP9.1□□□□□ -0.95
CDH12-201ENST00000382254 WWC1Q8IX03 1113 aa9.1□□□□□ -0.95
CDH12-201ENST00000382254 STK31Q9BXU1 1019 aa9.1□□□□□ -0.95
CDH12-201ENST00000382254 C1orf115Q9H7X2 142 aa9.1□□□□□ -0.95
CDH12-201ENST00000382254 REC8O95072 547 aa9.09□□□□□ -0.95
CDH12-201ENST00000382254 TPM2P07951 284 aa9.09□□□□□ -0.95
CDH12-201ENST00000382254 SLC12A5Q9H2X9 1139 aa9.09□□□□□ -0.95
CDH12-201ENST00000382254 MVPQ14764 893 aaKnown RBP9.09□□□□□ -0.95
CDH12-201ENST00000382254 C8orf34Q49A92 452 aa9.09□□□□□ -0.95
CDH12-201ENST00000382254 MINK1Q8N4C8 1332 aaPredicted RBP9.09□□□□□ -0.95
CDH12-201ENST00000382254 RRP9O43818 475 aaKnown RBP9.09□□□□□ -0.96
CDH12-201ENST00000382254 LMOD3Q0VAK6 560 aa9.09□□□□□ -0.96
CDH12-201ENST00000382254 CSPP1Q1MSJ5 1256 aa9.09□□□□□ -0.96
CDH12-201ENST00000382254 PRPF40AO75400 957 aaKnown RBP9.08□□□□□ -0.96
CDH12-201ENST00000382254 CDC45O75419 566 aa9.08□□□□□ -0.96
CDH12-201ENST00000382254 CCDC173Q0VFZ6 552 aa9.08□□□□□ -0.96
CDH12-201ENST00000382254 ZNF608Q9ULD9 1512 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms