RNA–Protein interactions for RNA: ENST00000382194.6

SMARCA2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-208ENST00000382194 CGNL1Q0VF96 1302 aa17.07■□□□□ 0.32
SMARCA2-208ENST00000382194 NFXL1Q6ZNB6 911 aa17.06■□□□□ 0.32
SMARCA2-208ENST00000382194 CLUAP1Q96AJ1 413 aa17.06■□□□□ 0.32
SMARCA2-208ENST00000382194 RAPGEF4Q8WZA2 1011 aa17.05■□□□□ 0.32
SMARCA2-208ENST00000382194 DDX11L8A8MPP1 907 aa17.05■□□□□ 0.32
SMARCA2-208ENST00000382194 NGEFQ8N5V2 710 aa17.05■□□□□ 0.32
SMARCA2-208ENST00000382194 HMGB2P26583 209 aaKnown RBP17.05■□□□□ 0.32
SMARCA2-208ENST00000382194 G3BP1Q13283 466 aaKnown RBP eCLIP17.05■□□□□ 0.32
SMARCA2-208ENST00000382194 CCAR2Q8N163 923 aaKnown RBP17.05■□□□□ 0.32
SMARCA2-208ENST00000382194 TRAK1Q9UPV9 953 aa17.05■□□□□ 0.32
SMARCA2-208ENST00000382194 HSP90AB4PQ58FF6 505 aa17.05■□□□□ 0.32
SMARCA2-208ENST00000382194 ROCK1Q13464 1354 aa17.04■□□□□ 0.32
SMARCA2-208ENST00000382194 BRMS1Q9HCU9 246 aa17.04■□□□□ 0.32
SMARCA2-208ENST00000382194 EIF2S2P20042 333 aaKnown RBP17.02■□□□□ 0.32
SMARCA2-208ENST00000382194 REC8O95072 547 aa17.02■□□□□ 0.31
SMARCA2-208ENST00000382194 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.31
SMARCA2-208ENST00000382194 SOGA1O94964 1423 aa17.01■□□□□ 0.31
SMARCA2-208ENST00000382194 HNRNPMP52272 730 aaKnown RBP eCLIP17.01■□□□□ 0.31
SMARCA2-208ENST00000382194 CCDC18Q5T9S5 1454 aa17.01■□□□□ 0.31
SMARCA2-208ENST00000382194 XBP1P17861 261 aa17.01■□□□□ 0.31
SMARCA2-208ENST00000382194 TMEM132AQ24JP5 1023 aa17.01■□□□□ 0.31
SMARCA2-208ENST00000382194 CCDC173Q0VFZ6 552 aa17.01■□□□□ 0.31
SMARCA2-208ENST00000382194 BAZ1AQ9NRL2 1556 aaPredicted RBP17■□□□□ 0.31
SMARCA2-208ENST00000382194 SKOR2Q2VWA4 1001 aaPredicted RBP17■□□□□ 0.31
SMARCA2-208ENST00000382194 CCDC146Q8IYE0 955 aa17■□□□□ 0.31
SMARCA2-208ENST00000382194 ZKSCAN2Q63HK3 967 aa17■□□□□ 0.31
SMARCA2-208ENST00000382194 API5Q9BZZ5 524 aaKnown RBP17■□□□□ 0.31
SMARCA2-208ENST00000382194 IKQ13123 557 aaPredicted RBP16.99■□□□□ 0.31
SMARCA2-208ENST00000382194 EPS15P42566 896 aa16.99■□□□□ 0.31
SMARCA2-208ENST00000382194 ANO2Q9NQ90 1003 aa16.99■□□□□ 0.31
SMARCA2-208ENST00000382194 RALYLQ86SE5 291 aaKnown RBP16.98■□□□□ 0.31
SMARCA2-208ENST00000382194 ANKRD45Q5TZF3 282 aa16.98■□□□□ 0.31
SMARCA2-208ENST00000382194 ERC2O15083 957 aa16.97■□□□□ 0.31
SMARCA2-208ENST00000382194 OFD1O75665 1012 aa16.97■□□□□ 0.31
SMARCA2-208ENST00000382194 FOXD4L1Q9NU39 408 aa16.97■□□□□ 0.31
SMARCA2-208ENST00000382194 ZFYVE27Q5T4F4 411 aa16.96■□□□□ 0.31
SMARCA2-208ENST00000382194 SLC3A2P08195 630 aaKnown RBP16.96■□□□□ 0.3
SMARCA2-208ENST00000382194 CCDC144AA2RUR9 1427 aa16.95■□□□□ 0.3
SMARCA2-208ENST00000382194 MYO6Q9UM54 1294 aa16.95■□□□□ 0.3
SMARCA2-208ENST00000382194 RUFY1Q96T51 708 aa16.95■□□□□ 0.3
SMARCA2-208ENST00000382194 CCDC27Q2M243 656 aa16.95■□□□□ 0.3
SMARCA2-208ENST00000382194 KIF15Q9NS87 1388 aa16.95■□□□□ 0.3
SMARCA2-208ENST00000382194 E9PSI1 815 aa16.94■□□□□ 0.3
SMARCA2-208ENST00000382194 FOXD4L5Q5VV16 416 aaPredicted RBP16.94■□□□□ 0.3
SMARCA2-208ENST00000382194 FOXD4L4Q8WXT5 416 aaPredicted RBP16.94■□□□□ 0.3
SMARCA2-208ENST00000382194 AK7Q96M32 723 aa16.94■□□□□ 0.3
SMARCA2-208ENST00000382194 PATL2C9JE40 543 aaKnown RBP16.94■□□□□ 0.3
SMARCA2-208ENST00000382194 NAP1L1P55209 391 aaKnown RBP16.94■□□□□ 0.3
SMARCA2-208ENST00000382194 SART3Q15020 963 aaKnown RBP16.94■□□□□ 0.3
SMARCA2-208ENST00000382194 HSP90AB2PQ58FF8 381 aa16.94■□□□□ 0.3
SMARCA2-208ENST00000382194 ACBD3Q9H3P7 528 aa16.94■□□□□ 0.3
SMARCA2-208ENST00000382194 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
SMARCA2-208ENST00000382194 DIAPH1O60610 1272 aaKnown RBP16.93■□□□□ 0.3
SMARCA2-208ENST00000382194 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
SMARCA2-208ENST00000382194 OSCARQ8IYS5 282 aa16.93■□□□□ 0.3
SMARCA2-208ENST00000382194 BICD2Q8TD16 824 aa16.92■□□□□ 0.3
SMARCA2-208ENST00000382194 TBC1D2BQ9UPU7 963 aa16.92■□□□□ 0.3
SMARCA2-208ENST00000382194 ARID3AQ99856 593 aa16.92■□□□□ 0.3
SMARCA2-208ENST00000382194 DEKP35659 375 aaKnown RBP16.92■□□□□ 0.3
SMARCA2-208ENST00000382194 RIC3Q7Z5B4 369 aa16.92■□□□□ 0.3
SMARCA2-208ENST00000382194 DDX49Q9Y6V7 483 aaKnown RBP16.92■□□□□ 0.3
SMARCA2-208ENST00000382194 FKBP5Q13451 457 aaPredicted RBP16.91■□□□□ 0.3
SMARCA2-208ENST00000382194 NLRP2Q9NX02 1062 aa16.91■□□□□ 0.3
SMARCA2-208ENST00000382194 CCDC73Q6ZRK6 1079 aa16.91■□□□□ 0.3
SMARCA2-208ENST00000382194 MINK1Q8N4C8 1332 aaPredicted RBP16.91■□□□□ 0.3
SMARCA2-208ENST00000382194 DDX19BQ9UMR2 479 aa16.9■□□□□ 0.3
SMARCA2-208ENST00000382194 TDRD9Q8NDG6 1382 aaKnown RBP16.9■□□□□ 0.3
SMARCA2-208ENST00000382194 WASHC4Q2M389 1173 aa16.9■□□□□ 0.3
SMARCA2-208ENST00000382194 JPH4Q96JJ6 628 aa16.89■□□□□ 0.29
SMARCA2-208ENST00000382194 MYBBP1AQ9BQG0 1328 aaKnown RBP16.89■□□□□ 0.29
SMARCA2-208ENST00000382194 HOMER1Q86YM7 354 aa16.89■□□□□ 0.29
SMARCA2-208ENST00000382194 CENPQQ7L2Z9 268 aaPredicted RBP16.89■□□□□ 0.29
SMARCA2-208ENST00000382194 WDHD1O75717 1129 aaPredicted RBP16.88■□□□□ 0.29
SMARCA2-208ENST00000382194 TEX35Q5T0J7 233 aa16.88■□□□□ 0.29
SMARCA2-208ENST00000382194 KIF6Q6ZMV9 814 aa16.88■□□□□ 0.29
SMARCA2-208ENST00000382194 GNL3LQ9NVN8 582 aaKnown RBP16.88■□□□□ 0.29
SMARCA2-208ENST00000382194 RRP7AQ9Y3A4 280 aaKnown RBP16.88■□□□□ 0.29
SMARCA2-208ENST00000382194 SYCP1Q15431 976 aa16.88■□□□□ 0.29
SMARCA2-208ENST00000382194 FYB1O15117 783 aa16.87■□□□□ 0.29
SMARCA2-208ENST00000382194 GPRASP1Q5JY77 1395 aa16.87■□□□□ 0.29
SMARCA2-208ENST00000382194 ZRSR2Q15696 482 aaKnown RBP16.87■□□□□ 0.29
SMARCA2-208ENST00000382194 NEUROD6Q96NK8 337 aa16.87■□□□□ 0.29
SMARCA2-208ENST00000382194 DCTN1Q14203 1278 aa16.87■□□□□ 0.29
SMARCA2-208ENST00000382194 PPP1R1BQ9UD71 204 aaPredicted RBP16.87■□□□□ 0.29
SMARCA2-208ENST00000382194 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
SMARCA2-208ENST00000382194 CALRP27797 417 aaKnown RBP16.87■□□□□ 0.29
SMARCA2-208ENST00000382194 OLFM4Q6UX06 510 aa16.87■□□□□ 0.29
SMARCA2-208ENST00000382194 CDK5RAP3Q96JB5 506 aa16.87■□□□□ 0.29
SMARCA2-208ENST00000382194 SASS6Q6UVJ0 657 aa16.86■□□□□ 0.29
SMARCA2-208ENST00000382194 GNAI1P63096 354 aa16.85■□□□□ 0.29
SMARCA2-208ENST00000382194 TSPYL4Q9UJ04 414 aa16.85■□□□□ 0.29
SMARCA2-208ENST00000382194 SMC3Q9UQE7 1217 aa16.85■□□□□ 0.29
SMARCA2-208ENST00000382194 MIA2Q96PC5 1412 aa16.85■□□□□ 0.29
SMARCA2-208ENST00000382194 TXLNAP40222 546 aa16.85■□□□□ 0.29
SMARCA2-208ENST00000382194 NAT10Q9H0A0 1025 aaKnown RBP16.84■□□□□ 0.29
SMARCA2-208ENST00000382194 PANK3Q9H999 370 aa16.83■□□□□ 0.29
SMARCA2-208ENST00000382194 NINLQ9Y2I6 1382 aa16.83■□□□□ 0.28
SMARCA2-208ENST00000382194 PIP4K2AP48426 406 aaPredicted RBP16.83■□□□□ 0.28
SMARCA2-208ENST00000382194 STAC3Q96MF2 364 aa16.83■□□□□ 0.28
SMARCA2-208ENST00000382194 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms