RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 API5Q9BZZ5 524 aaKnown RBP20.88■□□□□ 0.93
SNAPC3-202ENST00000380821 EVC2Q86UK5 1308 aa20.88■□□□□ 0.93
SNAPC3-202ENST00000380821 MRE11P49959 708 aa20.88■□□□□ 0.93
SNAPC3-202ENST00000380821 INTS3Q68E01 1043 aaKnown RBP20.88■□□□□ 0.93
SNAPC3-202ENST00000380821 MTERF4Q7Z6M4 381 aaKnown RBP20.87■□□□□ 0.93
SNAPC3-202ENST00000380821 AKAP17AQ02040 695 aaKnown RBP20.87■□□□□ 0.93
SNAPC3-202ENST00000380821 ANO2Q9NQ90 1003 aa20.87■□□□□ 0.93
SNAPC3-202ENST00000380821 CCDC39Q9UFE4 941 aa20.87■□□□□ 0.93
SNAPC3-202ENST00000380821 MARCH6O60337 910 aa20.87■□□□□ 0.93
SNAPC3-202ENST00000380821 FOXD4L6Q3SYB3 417 aaPredicted RBP20.87■□□□□ 0.93
SNAPC3-202ENST00000380821 FOXD4L3Q6VB84 417 aaPredicted RBP20.87■□□□□ 0.93
SNAPC3-202ENST00000380821 NFKBIBQ15653 356 aa20.86■□□□□ 0.93
SNAPC3-202ENST00000380821 NGDNQ8NEJ9 315 aaKnown RBP20.86■□□□□ 0.93
SNAPC3-202ENST00000380821 HOOK1Q9UJC3 728 aaKnown RBP20.86■□□□□ 0.93
SNAPC3-202ENST00000380821 MCTP1Q6DN14 999 aa20.86■□□□□ 0.93
SNAPC3-202ENST00000380821 SYNE3Q6ZMZ3 975 aa20.86■□□□□ 0.93
SNAPC3-202ENST00000380821 TRAK1Q9UPV9 953 aa20.86■□□□□ 0.93
SNAPC3-202ENST00000380821 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
SNAPC3-202ENST00000380821 APAF1O14727 1248 aa20.85■□□□□ 0.93
SNAPC3-202ENST00000380821 MAP7D2Q96T17 732 aa20.84■□□□□ 0.93
SNAPC3-202ENST00000380821 ANKRD20A12PQ8NF67 263 aa20.84■□□□□ 0.93
SNAPC3-202ENST00000380821 ARGLU1Q9NWB6 273 aaPredicted RBP20.84■□□□□ 0.93
SNAPC3-202ENST00000380821 TRIM29Q14134 588 aa20.84■□□□□ 0.93
SNAPC3-202ENST00000380821 CPLX2Q6PUV4 134 aaKnown RBP20.84■□□□□ 0.93
SNAPC3-202ENST00000380821 COG3Q96JB2 828 aa20.84■□□□□ 0.93
SNAPC3-202ENST00000380821 C22orf23Q9BZE7 217 aa20.84■□□□□ 0.93
SNAPC3-202ENST00000380821 WASHC2CQ9Y4E1 1318 aa20.83■□□□□ 0.93
SNAPC3-202ENST00000380821 CCDC7Q96M83 1385 aa20.83■□□□□ 0.92
SNAPC3-202ENST00000380821 RNF20Q5VTR2 975 aa20.83■□□□□ 0.92
SNAPC3-202ENST00000380821 HOMER1Q86YM7 354 aa20.82■□□□□ 0.92
SNAPC3-202ENST00000380821 SASS6Q6UVJ0 657 aa20.82■□□□□ 0.92
SNAPC3-202ENST00000380821 BICD2Q8TD16 824 aa20.82■□□□□ 0.92
SNAPC3-202ENST00000380821 EID1Q9Y6B2 187 aa20.82■□□□□ 0.92
SNAPC3-202ENST00000380821 IPO7O95373 1038 aaKnown RBP20.82■□□□□ 0.92
SNAPC3-202ENST00000380821 PDE4CQ08493 712 aa20.81■□□□□ 0.92
SNAPC3-202ENST00000380821 RUNDC1Q96C34 613 aa20.81■□□□□ 0.92
SNAPC3-202ENST00000380821 ELL2O00472 640 aaPredicted RBP20.81■□□□□ 0.92
SNAPC3-202ENST00000380821 CCDC47Q96A33 483 aaKnown RBP20.8■□□□□ 0.92
SNAPC3-202ENST00000380821 ACBD3Q9H3P7 528 aa20.8■□□□□ 0.92
SNAPC3-202ENST00000380821 NOM1Q5C9Z4 860 aaKnown RBP20.8■□□□□ 0.92
SNAPC3-202ENST00000380821 SMC3Q9UQE7 1217 aa20.8■□□□□ 0.92
SNAPC3-202ENST00000380821 CUX1P39880 1505 aa20.79■□□□□ 0.92
SNAPC3-202ENST00000380821 NUTM2DQ5VT03 806 aaPredicted RBP20.78■□□□□ 0.92
SNAPC3-202ENST00000380821 IFIT2P09913 472 aaKnown RBP20.78■□□□□ 0.92
SNAPC3-202ENST00000380821 DIAPH1O60610 1272 aaKnown RBP20.78■□□□□ 0.92
SNAPC3-202ENST00000380821 LETM1O95202 739 aaPredicted RBP20.78■□□□□ 0.92
SNAPC3-202ENST00000380821 NASPP49321 788 aaPredicted RBP20.78■□□□□ 0.92
SNAPC3-202ENST00000380821 C1orf141Q5JVX7 400 aa20.77■□□□□ 0.92
SNAPC3-202ENST00000380821 CDC45O75419 566 aa20.76■□□□□ 0.91
SNAPC3-202ENST00000380821 MIA2Q96PC5 1412 aa20.76■□□□□ 0.91
SNAPC3-202ENST00000380821 FRAT2O75474 233 aaPredicted RBP20.76■□□□□ 0.91
SNAPC3-202ENST00000380821 LTV1Q96GA3 475 aaPredicted RBP20.76■□□□□ 0.91
SNAPC3-202ENST00000380821 IFT57Q9NWB7 429 aa20.76■□□□□ 0.91
SNAPC3-202ENST00000380821 BRD4O60885 1362 aaPredicted RBP20.76■□□□□ 0.91
SNAPC3-202ENST00000380821 NEXNQ0ZGT2 675 aa20.76■□□□□ 0.91
SNAPC3-202ENST00000380821 VPS53Q5VIR6 699 aa20.76■□□□□ 0.91
SNAPC3-202ENST00000380821 AK7Q96M32 723 aa20.76■□□□□ 0.91
SNAPC3-202ENST00000380821 MNS1Q8NEH6 495 aa20.75■□□□□ 0.91
SNAPC3-202ENST00000380821 PCMTD1Q96MG8 357 aaPredicted RBP20.75■□□□□ 0.91
SNAPC3-202ENST00000380821 VGFO15240 615 aaPredicted RBP20.75■□□□□ 0.91
SNAPC3-202ENST00000380821 RIPK4P57078 832 aa20.75■□□□□ 0.91
SNAPC3-202ENST00000380821 CPLX1O14810 134 aa20.74■□□□□ 0.91
SNAPC3-202ENST00000380821 HSP90AB4PQ58FF6 505 aa20.74■□□□□ 0.91
SNAPC3-202ENST00000380821 KIF7Q2M1P5 1343 aa20.73■□□□□ 0.91
SNAPC3-202ENST00000380821 CCDC73Q6ZRK6 1079 aa20.73■□□□□ 0.91
SNAPC3-202ENST00000380821 C9orf78Q9NZ63 289 aaPredicted RBP20.73■□□□□ 0.91
SNAPC3-202ENST00000380821 R3HCC1Q9Y3T6 440 aaKnown RBP20.73■□□□□ 0.91
SNAPC3-202ENST00000380821 VPS37CA5D8V6 355 aaPredicted RBP20.73■□□□□ 0.91
SNAPC3-202ENST00000380821 G3V3G9 751 aa20.73■□□□□ 0.91
SNAPC3-202ENST00000380821 DCAF8Q5TAQ9 597 aa20.73■□□□□ 0.91
SNAPC3-202ENST00000380821 NAT10Q9H0A0 1025 aaKnown RBP20.72■□□□□ 0.91
SNAPC3-202ENST00000380821 CDR1P51861 262 aa20.72■□□□□ 0.91
SNAPC3-202ENST00000380821 ERC2O15083 957 aa20.71■□□□□ 0.91
SNAPC3-202ENST00000380821 GNAI1P63096 354 aa20.71■□□□□ 0.91
SNAPC3-202ENST00000380821 RUFY1Q96T51 708 aa20.71■□□□□ 0.91
SNAPC3-202ENST00000380821 CCDC9Q9Y3X0 531 aaKnown RBP20.7■□□□□ 0.9
SNAPC3-202ENST00000380821 CCDC173Q0VFZ6 552 aa20.7■□□□□ 0.9
SNAPC3-202ENST00000380821 PRM3Q9NNZ6 103 aa20.7■□□□□ 0.9
SNAPC3-202ENST00000380821 TRAK2O60296 914 aa20.7■□□□□ 0.9
SNAPC3-202ENST00000380821 AMOTL1Q8IY63 956 aa20.69■□□□□ 0.9
SNAPC3-202ENST00000380821 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.69■□□□□ 0.9
SNAPC3-202ENST00000380821 TEFQ10587 303 aa20.69■□□□□ 0.9
SNAPC3-202ENST00000380821 NINLQ9Y2I6 1382 aa20.69■□□□□ 0.9
SNAPC3-202ENST00000380821 MYOM3Q5VTT5 1437 aa20.68■□□□□ 0.9
SNAPC3-202ENST00000380821 MBD3O95983 291 aa20.68■□□□□ 0.9
SNAPC3-202ENST00000380821 TRDNQ13061 729 aa20.68■□□□□ 0.9
SNAPC3-202ENST00000380821 DDX58O95786 925 aaKnown RBP20.68■□□□□ 0.9
SNAPC3-202ENST00000380821 G3BP1Q13283 466 aaKnown RBP eCLIP20.68■□□□□ 0.9
SNAPC3-202ENST00000380821 CWC15Q9P013 229 aaKnown RBP20.68■□□□□ 0.9
SNAPC3-202ENST00000380821 HSP90B2PQ58FF3 399 aa20.67■□□□□ 0.9
SNAPC3-202ENST00000380821 STAC3Q96MF2 364 aa20.67■□□□□ 0.9
SNAPC3-202ENST00000380821 LNPKQ9C0E8 428 aa20.67■□□□□ 0.9
SNAPC3-202ENST00000380821 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
SNAPC3-202ENST00000380821 TSPY26PQ9H489 355 aa20.66■□□□□ 0.9
SNAPC3-202ENST00000380821 FGD6Q6ZV73 1430 aa20.65■□□□□ 0.9
SNAPC3-202ENST00000380821 GTF2E1P29083 439 aaPredicted RBP20.65■□□□□ 0.9
SNAPC3-202ENST00000380821 OLFM4Q6UX06 510 aa20.65■□□□□ 0.9
SNAPC3-202ENST00000380821 RUSC2Q8N2Y8 1516 aa20.65■□□□□ 0.9
SNAPC3-202ENST00000380821 TTC5Q8N0Z6 440 aa20.65■□□□□ 0.9
SNAPC3-202ENST00000380821 ERCC4Q92889 916 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms