RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 ERBINQ96RT1 1412 aa22.52■■□□□ 1.19
UBL3-201ENST00000380680 DIAPH1O60610 1272 aaKnown RBP22.52■■□□□ 1.19
UBL3-201ENST00000380680 AMPHP49418 695 aa22.51■■□□□ 1.19
UBL3-201ENST00000380680 ATP10BO94823 1461 aa22.51■■□□□ 1.19
UBL3-201ENST00000380680 OS9Q13438 667 aaPredicted RBP22.5■■□□□ 1.19
UBL3-201ENST00000380680 NCLP19338 710 aaKnown RBP22.49■■□□□ 1.19
UBL3-201ENST00000380680 LMOD3Q0VAK6 560 aa22.49■■□□□ 1.19
UBL3-201ENST00000380680 LTV1Q96GA3 475 aaPredicted RBP22.49■■□□□ 1.19
UBL3-201ENST00000380680 DEKP35659 375 aaKnown RBP22.48■■□□□ 1.19
UBL3-201ENST00000380680 ZKSCAN2Q63HK3 967 aa22.48■■□□□ 1.19
UBL3-201ENST00000380680 HSCBQ8IWL3 235 aa22.48■■□□□ 1.19
UBL3-201ENST00000380680 RAPGEF6Q8TEU7 1601 aa22.48■■□□□ 1.19
UBL3-201ENST00000380680 SLKQ9H2G2 1235 aaPredicted RBP22.48■■□□□ 1.19
UBL3-201ENST00000380680 RIPK4P57078 832 aa22.47■■□□□ 1.19
UBL3-201ENST00000380680 TCP11L2Q8N4U5 519 aa22.46■■□□□ 1.19
UBL3-201ENST00000380680 CFAP43Q8NDM7 1665 aa22.45■■□□□ 1.18
UBL3-201ENST00000380680 STK31Q9BXU1 1019 aa22.44■■□□□ 1.18
UBL3-201ENST00000380680 ADAMTS12P58397 1594 aa22.44■■□□□ 1.18
UBL3-201ENST00000380680 FANCIQ9NVI1 1328 aa22.44■■□□□ 1.18
UBL3-201ENST00000380680 MFAP1P55081 439 aaKnown RBP22.44■■□□□ 1.18
UBL3-201ENST00000380680 SLC4A10Q6U841 1118 aa22.43■■□□□ 1.18
UBL3-201ENST00000380680 PRAM1Q96QH2 718 aa22.43■■□□□ 1.18
UBL3-201ENST00000380680 FAM161AQ3B820 660 aa22.43■■□□□ 1.18
UBL3-201ENST00000380680 KIF21AQ7Z4S6 1674 aa22.42■■□□□ 1.18
UBL3-201ENST00000380680 SLC52A1Q9NWF4 448 aa22.41■■□□□ 1.18
UBL3-201ENST00000380680 HMOX1P09601 288 aa22.4■■□□□ 1.18
UBL3-201ENST00000380680 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.4■■□□□ 1.18
UBL3-201ENST00000380680 PANK1Q8TE04 598 aa22.39■■□□□ 1.18
UBL3-201ENST00000380680 TCOF1Q13428 1488 aaKnown RBP22.39■■□□□ 1.17
UBL3-201ENST00000380680 WDR62O43379 1518 aa22.39■■□□□ 1.17
UBL3-201ENST00000380680 SLC4A3P48751 1232 aa22.39■■□□□ 1.17
UBL3-201ENST00000380680 TPRNQ4KMQ1 711 aa22.38■■□□□ 1.17
UBL3-201ENST00000380680 SMG6Q86US8 1419 aaKnown RBP22.37■■□□□ 1.17
UBL3-201ENST00000380680 KIAA0556O60303 1618 aa22.37■■□□□ 1.17
UBL3-201ENST00000380680 DZIP1LQ8IYY4 767 aaKnown RBP22.37■■□□□ 1.17
UBL3-201ENST00000380680 ADGRL1O94910 1474 aa22.35■■□□□ 1.17
UBL3-201ENST00000380680 CD109Q6YHK3 1445 aa22.34■■□□□ 1.17
UBL3-201ENST00000380680 CSB-PGBD3P0DP91 1061 aa22.34■■□□□ 1.17
UBL3-201ENST00000380680 TRIM44Q96DX7 344 aaPredicted RBP22.34■■□□□ 1.17
UBL3-201ENST00000380680 ADGRF5Q8IZF2 1346 aa22.34■■□□□ 1.17
UBL3-201ENST00000380680 KCNJ4P48050 445 aa22.33■■□□□ 1.17
UBL3-201ENST00000380680 RTN4Q9NQC3 1192 aaKnown RBP22.33■■□□□ 1.17
UBL3-201ENST00000380680 DDX19BQ9UMR2 479 aa22.31■■□□□ 1.16
UBL3-201ENST00000380680 DISP1Q96F81 1524 aa22.31■■□□□ 1.16
UBL3-201ENST00000380680 BCAR3O75815 825 aa22.31■■□□□ 1.16
UBL3-201ENST00000380680 CABP1Q9NZU7 370 aa22.31■■□□□ 1.16
UBL3-201ENST00000380680 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
UBL3-201ENST00000380680 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
UBL3-201ENST00000380680 ANKRD45Q5TZF3 282 aa22.3■■□□□ 1.16
UBL3-201ENST00000380680 TXNDC2Q86VQ3 553 aa22.3■■□□□ 1.16
UBL3-201ENST00000380680 CFAP44Q96MT7 982 aa22.3■■□□□ 1.16
UBL3-201ENST00000380680 HMMRO75330 724 aa22.3■■□□□ 1.16
UBL3-201ENST00000380680 CDK19Q9BWU1 502 aa22.28■■□□□ 1.16
UBL3-201ENST00000380680 FANCAO15360 1455 aa22.27■■□□□ 1.16
UBL3-201ENST00000380680 EIF4G3O43432 1585 aaKnown RBP22.26■■□□□ 1.15
UBL3-201ENST00000380680 MCCP23508 829 aa22.26■■□□□ 1.15
UBL3-201ENST00000380680 PRKAR2BP31323 418 aa22.25■■□□□ 1.15
UBL3-201ENST00000380680 CHMP4AQ9BY43 222 aa22.24■■□□□ 1.15
UBL3-201ENST00000380680 DISP3Q9P2K9 1392 aa22.24■■□□□ 1.15
UBL3-201ENST00000380680 PLCH2O75038 1416 aa22.24■■□□□ 1.15
UBL3-201ENST00000380680 GNAI1P63096 354 aa22.24■■□□□ 1.15
UBL3-201ENST00000380680 EXOSC9Q06265 439 aaKnown RBP22.24■■□□□ 1.15
UBL3-201ENST00000380680 TSR2Q969E8 191 aaKnown RBP22.24■■□□□ 1.15
UBL3-201ENST00000380680 ITSN2Q9NZM3 1697 aa22.23■■□□□ 1.15
UBL3-201ENST00000380680 IDI1Q13907 227 aa22.23■■□□□ 1.15
UBL3-201ENST00000380680 SYCP2Q9BX26 1530 aa22.22■■□□□ 1.15
UBL3-201ENST00000380680 SAMD9Q5K651 1589 aa22.22■■□□□ 1.15
UBL3-201ENST00000380680 KIF16BQ96L93 1317 aa22.22■■□□□ 1.15
UBL3-201ENST00000380680 GZF1Q9H116 711 aaPredicted RBP22.22■■□□□ 1.15
UBL3-201ENST00000380680 FGD1P98174 961 aa22.22■■□□□ 1.15
UBL3-201ENST00000380680 NSD3Q9BZ95 1437 aa22.21■■□□□ 1.15
UBL3-201ENST00000380680 DHX29Q7Z478 1369 aaKnown RBP22.21■■□□□ 1.15
UBL3-201ENST00000380680 TRIM6-TRIM34B2RNG4 842 aa22.21■■□□□ 1.15
UBL3-201ENST00000380680 NUTM2GQ5VZR2 741 aa22.2■■□□□ 1.14
UBL3-201ENST00000380680 NUP160Q12769 1436 aa22.2■■□□□ 1.14
UBL3-201ENST00000380680 API5Q9BZZ5 524 aaKnown RBP22.2■■□□□ 1.14
UBL3-201ENST00000380680 NECTIN2Q92692 538 aa22.19■■□□□ 1.14
UBL3-201ENST00000380680 MAGI3Q5TCQ9 1506 aa22.19■■□□□ 1.14
UBL3-201ENST00000380680 PDE3AQ14432 1141 aa22.19■■□□□ 1.14
UBL3-201ENST00000380680 KIAA1211Q6ZU35 1233 aa22.18■■□□□ 1.14
UBL3-201ENST00000380680 ZNF330Q9Y3S2 320 aaPredicted RBP22.18■■□□□ 1.14
UBL3-201ENST00000380680 LNPKQ9C0E8 428 aa22.17■■□□□ 1.14
UBL3-201ENST00000380680 SLFN5Q08AF3 891 aa22.17■■□□□ 1.14
UBL3-201ENST00000380680 FOXD4L1Q9NU39 408 aa22.17■■□□□ 1.14
UBL3-201ENST00000380680 NLRP6P59044 892 aa22.17■■□□□ 1.14
UBL3-201ENST00000380680 FBXO31Q5XUX0 539 aaPredicted RBP22.17■■□□□ 1.14
UBL3-201ENST00000380680 RALGAPBQ86X10 1494 aa22.17■■□□□ 1.14
UBL3-201ENST00000380680 TRAPPC8Q9Y2L5 1435 aa22.17■■□□□ 1.14
UBL3-201ENST00000380680 TEFQ10587 303 aa22.16■■□□□ 1.14
UBL3-201ENST00000380680 WWC1Q8IX03 1113 aa22.16■■□□□ 1.14
UBL3-201ENST00000380680 PBRM1Q86U86 1689 aa22.16■■□□□ 1.14
UBL3-201ENST00000380680 PZPP20742 1482 aa22.16■■□□□ 1.14
UBL3-201ENST00000380680 SLC26A8Q96RN1 970 aa22.16■■□□□ 1.14
UBL3-201ENST00000380680 PSME1Q06323 249 aa22.15■■□□□ 1.14
UBL3-201ENST00000380680 SCAF11Q99590 1463 aaKnown RBP22.15■■□□□ 1.14
UBL3-201ENST00000380680 WAPLQ7Z5K2 1190 aa22.14■■□□□ 1.13
UBL3-201ENST00000380680 GBP4Q96PP9 640 aa22.14■■□□□ 1.13
UBL3-201ENST00000380680 FAM135AQ9P2D6 1515 aa22.14■■□□□ 1.13
UBL3-201ENST00000380680 WDR63Q8IWG1 891 aa22.14■■□□□ 1.13
UBL3-201ENST00000380680 NOS1P29475 1434 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms