RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 SYNMO15061 1565 aa19.21■□□□□ 0.67
TNFSF13-203ENST00000380535 WASHC2AQ641Q2 1341 aa19.21■□□□□ 0.67
TNFSF13-203ENST00000380535 UGGT1Q9NYU2 1555 aa19.21■□□□□ 0.66
TNFSF13-203ENST00000380535 PPLO60437 1756 aa19.19■□□□□ 0.66
TNFSF13-203ENST00000380535 NRXN1Q9ULB1 1477 aa19.19■□□□□ 0.66
TNFSF13-203ENST00000380535 CLTCQ00610 1675 aaKnown RBP19.18■□□□□ 0.66
TNFSF13-203ENST00000380535 CFAP65Q6ZU64 1925 aaKnown RBP19.18■□□□□ 0.66
TNFSF13-203ENST00000380535 ANP32CO43423 234 aa19.17■□□□□ 0.66
TNFSF13-203ENST00000380535 IQGAP1P46940 1657 aa19.17■□□□□ 0.66
TNFSF13-203ENST00000380535 PLEKHG5O94827 1062 aa19.16■□□□□ 0.66
TNFSF13-203ENST00000380535 DNAJC5Q9H3Z4 198 aa19.15■□□□□ 0.66
TNFSF13-203ENST00000380535 ERVK-7P63135 1459 aa19.15■□□□□ 0.66
TNFSF13-203ENST00000380535 KIF7Q2M1P5 1343 aa19.14■□□□□ 0.65
TNFSF13-203ENST00000380535 SPATA31D1Q6ZQQ2 1576 aa19.14■□□□□ 0.65
TNFSF13-203ENST00000380535 SETBP1Q9Y6X0 1596 aa19.14■□□□□ 0.65
TNFSF13-203ENST00000380535 EIF3AQ14152 1382 aaKnown RBP19.13■□□□□ 0.65
TNFSF13-203ENST00000380535 SCAF11Q99590 1463 aaKnown RBP19.12■□□□□ 0.65
TNFSF13-203ENST00000380535 CCER2I3L3R5 266 aa19.12■□□□□ 0.65
TNFSF13-203ENST00000380535 ESF1Q9H501 851 aaKnown RBP19.12■□□□□ 0.65
TNFSF13-203ENST00000380535 ZFYVE9O95405 1425 aa19.12■□□□□ 0.65
TNFSF13-203ENST00000380535 ST20-MTHFSA0A0A6YYL1 179 aa19.1■□□□□ 0.65
TNFSF13-203ENST00000380535 NBPF1Q3BBV0 1214 aa19.1■□□□□ 0.65
TNFSF13-203ENST00000380535 TMEM131LA2VDJ0 1609 aa19.1■□□□□ 0.65
TNFSF13-203ENST00000380535 TRHP20396 242 aaPredicted RBP19.09■□□□□ 0.65
TNFSF13-203ENST00000380535 RTN4Q9NQC3 1192 aaKnown RBP19.09■□□□□ 0.65
TNFSF13-203ENST00000380535 VGFO15240 615 aaPredicted RBP19.08■□□□□ 0.65
TNFSF13-203ENST00000380535 CHGAP10645 457 aaKnown RBP19.08■□□□□ 0.65
TNFSF13-203ENST00000380535 NEXMIFQ5QGS0 1516 aa19.08■□□□□ 0.64
TNFSF13-203ENST00000380535 PIK3C2GO75747 1445 aa19.08■□□□□ 0.64
TNFSF13-203ENST00000380535 C11orf95C9JLR9 678 aaPredicted RBP19.08■□□□□ 0.64
TNFSF13-203ENST00000380535 KDM5AP29375 1690 aaKnown RBP19.06■□□□□ 0.64
TNFSF13-203ENST00000380535 IDI1Q13907 227 aa19.05■□□□□ 0.64
TNFSF13-203ENST00000380535 UBE2Q2Q8WVN8 375 aa19.05■□□□□ 0.64
TNFSF13-203ENST00000380535 CDCA8Q53HL2 280 aa19.04■□□□□ 0.64
TNFSF13-203ENST00000380535 TMF1P82094 1093 aa19.03■□□□□ 0.64
TNFSF13-203ENST00000380535 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
TNFSF13-203ENST00000380535 ADGRF5Q8IZF2 1346 aa19.03■□□□□ 0.64
TNFSF13-203ENST00000380535 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
TNFSF13-203ENST00000380535 ZMYM3Q14202 1370 aa19.02■□□□□ 0.64
TNFSF13-203ENST00000380535 MYO5BQ9ULV0 1848 aa19.02■□□□□ 0.63
TNFSF13-203ENST00000380535 C14orf93Q9H972 538 aaKnown RBP19.01■□□□□ 0.63
TNFSF13-203ENST00000380535 TESK2Q96S53 571 aa19■□□□□ 0.63
TNFSF13-203ENST00000380535 MLECQ14165 292 aa18.99■□□□□ 0.63
TNFSF13-203ENST00000380535 SBNO2Q9Y2G9 1366 aa18.99■□□□□ 0.63
TNFSF13-203ENST00000380535 KTN1Q86UP2 1357 aaKnown RBP18.98■□□□□ 0.63
TNFSF13-203ENST00000380535 CFAP70Q5T0N1 1121 aa18.98■□□□□ 0.63
TNFSF13-203ENST00000380535 FBXO31Q5XUX0 539 aaPredicted RBP18.97■□□□□ 0.63
TNFSF13-203ENST00000380535 ADGRB1O14514 1584 aa18.97■□□□□ 0.63
TNFSF13-203ENST00000380535 STAG3Q9UJ98 1225 aa18.96■□□□□ 0.63
TNFSF13-203ENST00000380535 FER1L4A9Z1Z3 1794 aa18.95■□□□□ 0.62
TNFSF13-203ENST00000380535 A2ML1A8K2U0 1454 aa18.95■□□□□ 0.62
TNFSF13-203ENST00000380535 TNRQ92752 1358 aa18.95■□□□□ 0.62
TNFSF13-203ENST00000380535 HDGFP51858 240 aaKnown RBP18.94■□□□□ 0.62
TNFSF13-203ENST00000380535 NLRP1Q9C000 1473 aa18.94■□□□□ 0.62
TNFSF13-203ENST00000380535 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
TNFSF13-203ENST00000380535 PODXL2Q9NZ53 605 aa18.93■□□□□ 0.62
TNFSF13-203ENST00000380535 PRKRIP1Q9H875 184 aaPredicted RBP18.92■□□□□ 0.62
TNFSF13-203ENST00000380535 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
TNFSF13-203ENST00000380535 DISP3Q9P2K9 1392 aa18.91■□□□□ 0.62
TNFSF13-203ENST00000380535 RIMS2Q9UQ26 1411 aa18.89■□□□□ 0.61
TNFSF13-203ENST00000380535 C3P01024 1663 aa18.89■□□□□ 0.61
TNFSF13-203ENST00000380535 CENPJQ9HC77 1338 aaPredicted RBP18.89■□□□□ 0.61
TNFSF13-203ENST00000380535 QRICH2Q9H0J4 1663 aa18.88■□□□□ 0.61
TNFSF13-203ENST00000380535 UBR1Q8IWV7 1749 aa18.87■□□□□ 0.61
TNFSF13-203ENST00000380535 ARHGEF28Q8N1W1 1705 aaKnown RBP18.87■□□□□ 0.61
TNFSF13-203ENST00000380535 PUS7Q96PZ0 661 aaKnown RBP18.86■□□□□ 0.61
TNFSF13-203ENST00000380535 ALKQ9UM73 1620 aa18.86■□□□□ 0.61
TNFSF13-203ENST00000380535 RALBP1Q15311 655 aa18.85■□□□□ 0.61
TNFSF13-203ENST00000380535 KLHL34Q8N239 644 aa18.85■□□□□ 0.61
TNFSF13-203ENST00000380535 SUPT16HQ9Y5B9 1047 aaKnown RBP18.85■□□□□ 0.61
TNFSF13-203ENST00000380535 DLC1Q96QB1 1528 aa18.82■□□□□ 0.6
TNFSF13-203ENST00000380535 MYOM1P52179 1685 aa18.81■□□□□ 0.6
TNFSF13-203ENST00000380535 ASXL1Q8IXJ9 1541 aa18.81■□□□□ 0.6
TNFSF13-203ENST00000380535 SETD1AO15047 1707 aaKnown RBP18.8■□□□□ 0.6
TNFSF13-203ENST00000380535 TMEM2Q9UHN6 1383 aa18.8■□□□□ 0.6
TNFSF13-203ENST00000380535 TRAK1Q9UPV9 953 aa18.79■□□□□ 0.6
TNFSF13-203ENST00000380535 YTHDC2Q9H6S0 1430 aaKnown RBP18.79■□□□□ 0.6
TNFSF13-203ENST00000380535 PER1O15534 1290 aaPredicted RBP18.77■□□□□ 0.6
TNFSF13-203ENST00000380535 NUTM2DQ5VT03 806 aaPredicted RBP18.77■□□□□ 0.6
TNFSF13-203ENST00000380535 TMEM132EQ6IEE7 984 aa18.77■□□□□ 0.6
TNFSF13-203ENST00000380535 NPC1L1Q9UHC9 1359 aa18.77■□□□□ 0.6
TNFSF13-203ENST00000380535 ADAMTSL3P82987 1691 aa18.77■□□□□ 0.59
TNFSF13-203ENST00000380535 SLIT1O75093 1534 aa18.77■□□□□ 0.59
TNFSF13-203ENST00000380535 PANK3Q9H999 370 aa18.76■□□□□ 0.59
TNFSF13-203ENST00000380535 EVC2Q86UK5 1308 aa18.76■□□□□ 0.59
TNFSF13-203ENST00000380535 MYBBP1AQ9BQG0 1328 aaKnown RBP18.76■□□□□ 0.59
TNFSF13-203ENST00000380535 KNDC1Q76NI1 1749 aa18.76■□□□□ 0.59
TNFSF13-203ENST00000380535 NRXN3Q9Y4C0 1643 aa18.76■□□□□ 0.59
TNFSF13-203ENST00000380535 LRPPRCP42704 1394 aaKnown RBP18.75■□□□□ 0.59
TNFSF13-203ENST00000380535 PARD3Q8TEW0 1356 aa18.75■□□□□ 0.59
TNFSF13-203ENST00000380535 PTPRMP28827 1452 aa18.75■□□□□ 0.59
TNFSF13-203ENST00000380535 BRD4O60885 1362 aaPredicted RBP18.75■□□□□ 0.59
TNFSF13-203ENST00000380535 NINLQ9Y2I6 1382 aa18.75■□□□□ 0.59
TNFSF13-203ENST00000380535 CCDC184Q52MB2 194 aa18.75■□□□□ 0.59
TNFSF13-203ENST00000380535 RIMS1Q86UR5 1692 aaKnown RBP18.74■□□□□ 0.59
TNFSF13-203ENST00000380535 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
TNFSF13-203ENST00000380535 ARHGAP23Q9P227 1491 aa18.74■□□□□ 0.59
TNFSF13-203ENST00000380535 ABCC11Q96J66 1382 aa18.73■□□□□ 0.59
TNFSF13-203ENST00000380535 PLEKHG1Q9ULL1 1385 aa18.73■□□□□ 0.59
TNFSF13-203ENST00000380535 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms