RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 NEURL4Q96JN8 1562 aa20.19■□□□□ 0.82
HERPUD1-203ENST00000379792 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
HERPUD1-203ENST00000379792 MYO5BQ9ULV0 1848 aa20.18■□□□□ 0.82
HERPUD1-203ENST00000379792 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
HERPUD1-203ENST00000379792 ADGRF5Q8IZF2 1346 aa20.17■□□□□ 0.82
HERPUD1-203ENST00000379792 UBR1Q8IWV7 1749 aa20.14■□□□□ 0.81
HERPUD1-203ENST00000379792 RIMS2Q9UQ26 1411 aa20.14■□□□□ 0.81
HERPUD1-203ENST00000379792 NEXMIFQ5QGS0 1516 aa20.13■□□□□ 0.81
HERPUD1-203ENST00000379792 PRAG1Q86YV5 1406 aa20.13■□□□□ 0.81
HERPUD1-203ENST00000379792 THEMISQ8N1K5 641 aaPredicted RBP20.13■□□□□ 0.81
HERPUD1-203ENST00000379792 VGFO15240 615 aaPredicted RBP20.12■□□□□ 0.81
HERPUD1-203ENST00000379792 TMEM2Q9UHN6 1383 aa20.12■□□□□ 0.81
HERPUD1-203ENST00000379792 STAC3Q96MF2 364 aa20.11■□□□□ 0.81
HERPUD1-203ENST00000379792 PPLO60437 1756 aa20.1■□□□□ 0.81
HERPUD1-203ENST00000379792 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
HERPUD1-203ENST00000379792 MYOM2P54296 1465 aa20.09■□□□□ 0.81
HERPUD1-203ENST00000379792 ZFYVE9O95405 1425 aa20.09■□□□□ 0.81
HERPUD1-203ENST00000379792 LTKP29376 864 aa20.08■□□□□ 0.81
HERPUD1-203ENST00000379792 TXNDC2Q86VQ3 553 aa20.08■□□□□ 0.81
HERPUD1-203ENST00000379792 KDM5AP29375 1690 aaKnown RBP20.08■□□□□ 0.8
HERPUD1-203ENST00000379792 NBPF1Q3BBV0 1214 aa20.08■□□□□ 0.8
HERPUD1-203ENST00000379792 NCKAP5LQ9HCH0 1330 aa20.07■□□□□ 0.8
HERPUD1-203ENST00000379792 CFAP70Q5T0N1 1121 aa20.07■□□□□ 0.8
HERPUD1-203ENST00000379792 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.07■□□□□ 0.8
HERPUD1-203ENST00000379792 HDGFP51858 240 aaKnown RBP20.06■□□□□ 0.8
HERPUD1-203ENST00000379792 NRXN1Q9ULB1 1477 aa20.06■□□□□ 0.8
HERPUD1-203ENST00000379792 EID1Q9Y6B2 187 aa20.06■□□□□ 0.8
HERPUD1-203ENST00000379792 BCANQ96GW7 911 aa20.03■□□□□ 0.8
HERPUD1-203ENST00000379792 PIK3C2GO75747 1445 aa20.03■□□□□ 0.8
HERPUD1-203ENST00000379792 POLR1AO95602 1720 aaPredicted RBP20.03■□□□□ 0.8
HERPUD1-203ENST00000379792 ARHGAP23Q9P227 1491 aa20.03■□□□□ 0.8
HERPUD1-203ENST00000379792 SLIT1O75093 1534 aa20.03■□□□□ 0.8
HERPUD1-203ENST00000379792 ROCK2O75116 1388 aaKnown RBP20.02■□□□□ 0.8
HERPUD1-203ENST00000379792 ANKLE2Q86XL3 938 aa20.02■□□□□ 0.8
HERPUD1-203ENST00000379792 C14orf93Q9H972 538 aaKnown RBP20.02■□□□□ 0.8
HERPUD1-203ENST00000379792 RALGAPBQ86X10 1494 aa20.02■□□□□ 0.8
HERPUD1-203ENST00000379792 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
HERPUD1-203ENST00000379792 TRPM1Q7Z4N2 1603 aa20■□□□□ 0.79
HERPUD1-203ENST00000379792 TMEM132EQ6IEE7 984 aa20■□□□□ 0.79
HERPUD1-203ENST00000379792 CERKQ8TCT0 537 aa19.98■□□□□ 0.79
HERPUD1-203ENST00000379792 HIRIP3Q9BW71 556 aaPredicted RBP19.98■□□□□ 0.79
HERPUD1-203ENST00000379792 MED14O60244 1454 aa19.98■□□□□ 0.79
HERPUD1-203ENST00000379792 SCAF11Q99590 1463 aaKnown RBP19.98■□□□□ 0.79
HERPUD1-203ENST00000379792 ILDR1Q86SU0 546 aaPredicted RBP19.98■□□□□ 0.79
HERPUD1-203ENST00000379792 PLEKHG1Q9ULL1 1385 aa19.96■□□□□ 0.79
HERPUD1-203ENST00000379792 SLC26A8Q96RN1 970 aa19.96■□□□□ 0.79
HERPUD1-203ENST00000379792 FBXO41Q8TF61 875 aa19.95■□□□□ 0.78
HERPUD1-203ENST00000379792 LTBP4Q8N2S1 1624 aa19.95■□□□□ 0.78
HERPUD1-203ENST00000379792 GPRASP1Q5JY77 1395 aa19.94■□□□□ 0.78
HERPUD1-203ENST00000379792 NPHP4O75161 1426 aaPredicted RBP19.94■□□□□ 0.78
HERPUD1-203ENST00000379792 ALKQ9UM73 1620 aa19.93■□□□□ 0.78
HERPUD1-203ENST00000379792 HSPA5P11021 654 aaKnown RBP19.93■□□□□ 0.78
HERPUD1-203ENST00000379792 EIF4G2P78344 907 aaKnown RBP eCLIP19.93■□□□□ 0.78
HERPUD1-203ENST00000379792 STK26Q9P289 416 aa19.92■□□□□ 0.78
HERPUD1-203ENST00000379792 NRXN3Q9Y4C0 1643 aa19.92■□□□□ 0.78
HERPUD1-203ENST00000379792 USP47Q96K76 1375 aa19.92■□□□□ 0.78
HERPUD1-203ENST00000379792 KIAA1210Q9ULL0 1709 aa19.92■□□□□ 0.78
HERPUD1-203ENST00000379792 ADAMTS13Q76LX8 1427 aa19.91■□□□□ 0.78
HERPUD1-203ENST00000379792 SETBP1Q9Y6X0 1596 aa19.91■□□□□ 0.78
HERPUD1-203ENST00000379792 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
HERPUD1-203ENST00000379792 METP08581 1390 aa19.9■□□□□ 0.78
HERPUD1-203ENST00000379792 IQSEC2Q5JU85 1478 aa19.89■□□□□ 0.78
HERPUD1-203ENST00000379792 ZNF335Q9H4Z2 1342 aaPredicted RBP19.89■□□□□ 0.78
HERPUD1-203ENST00000379792 ADGRB1O14514 1584 aa19.89■□□□□ 0.78
HERPUD1-203ENST00000379792 ASXL1Q8IXJ9 1541 aa19.89■□□□□ 0.77
HERPUD1-203ENST00000379792 TRAK1Q9UPV9 953 aa19.89■□□□□ 0.77
HERPUD1-203ENST00000379792 LAMC1P11047 1609 aa19.87■□□□□ 0.77
HERPUD1-203ENST00000379792 ST20-MTHFSA0A0A6YYL1 179 aa19.87■□□□□ 0.77
HERPUD1-203ENST00000379792 TBX22Q9Y458 520 aa19.87■□□□□ 0.77
HERPUD1-203ENST00000379792 ZNF316A6NFI3 1004 aaPredicted RBP19.85■□□□□ 0.77
HERPUD1-203ENST00000379792 SETD1AO15047 1707 aaKnown RBP19.85■□□□□ 0.77
HERPUD1-203ENST00000379792 YTHDC2Q9H6S0 1430 aaKnown RBP19.84■□□□□ 0.77
HERPUD1-203ENST00000379792 CPS1P31327 1500 aa19.82■□□□□ 0.76
HERPUD1-203ENST00000379792 LRPPRCP42704 1394 aaKnown RBP19.82■□□□□ 0.76
HERPUD1-203ENST00000379792 PTPRUQ92729 1446 aa19.8■□□□□ 0.76
HERPUD1-203ENST00000379792 SAFB2Q14151 953 aaKnown RBP eCLIP19.8■□□□□ 0.76
HERPUD1-203ENST00000379792 AMOTL2Q9Y2J4 779 aa19.79■□□□□ 0.76
HERPUD1-203ENST00000379792 EIF3AQ14152 1382 aaKnown RBP19.78■□□□□ 0.76
HERPUD1-203ENST00000379792 DIP2AQ14689 1571 aa19.78■□□□□ 0.76
HERPUD1-203ENST00000379792 ABCC11Q96J66 1382 aa19.78■□□□□ 0.76
HERPUD1-203ENST00000379792 WAPLQ7Z5K2 1190 aa19.78■□□□□ 0.76
HERPUD1-203ENST00000379792 PRAM1Q96QH2 718 aa19.78■□□□□ 0.76
HERPUD1-203ENST00000379792 CENPJQ9HC77 1338 aaPredicted RBP19.77■□□□□ 0.76
HERPUD1-203ENST00000379792 C11orf95C9JLR9 678 aaPredicted RBP19.77■□□□□ 0.76
HERPUD1-203ENST00000379792 TESK2Q96S53 571 aa19.77■□□□□ 0.76
HERPUD1-203ENST00000379792 POGKQ9P215 609 aa19.77■□□□□ 0.76
HERPUD1-203ENST00000379792 ROBO2Q9HCK4 1378 aa19.74■□□□□ 0.75
HERPUD1-203ENST00000379792 PLEKHH1Q9ULM0 1364 aa19.74■□□□□ 0.75
HERPUD1-203ENST00000379792 KCNA6P17658 529 aa19.74■□□□□ 0.75
HERPUD1-203ENST00000379792 PIK3R4Q99570 1358 aa19.73■□□□□ 0.75
HERPUD1-203ENST00000379792 STRCP1A6NGW2 1772 aa19.73■□□□□ 0.75
HERPUD1-203ENST00000379792 ARHGEF28Q8N1W1 1705 aaKnown RBP19.72■□□□□ 0.75
HERPUD1-203ENST00000379792 TECPR2O15040 1411 aa19.71■□□□□ 0.75
HERPUD1-203ENST00000379792 POLR3GLQ9BT43 218 aa19.71■□□□□ 0.75
HERPUD1-203ENST00000379792 MINK1Q8N4C8 1332 aaPredicted RBP19.71■□□□□ 0.75
HERPUD1-203ENST00000379792 DLC1Q96QB1 1528 aa19.7■□□□□ 0.74
HERPUD1-203ENST00000379792 DISP3Q9P2K9 1392 aa19.7■□□□□ 0.74
HERPUD1-203ENST00000379792 WASHC2AQ641Q2 1341 aa19.69■□□□□ 0.74
HERPUD1-203ENST00000379792 SIRT1Q96EB6 747 aa19.69■□□□□ 0.74
HERPUD1-203ENST00000379792 RBM33Q96EV2 1170 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms