RNA–Protein interactions for RNA: ENST00000379066.5

PRKD3-202, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRKD3, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-202ENST00000379066 WIZO95785 1651 aa4.52□□□□□ -1.69
PRKD3-202ENST00000379066 IFT140Q96RY7 1462 aa4.52□□□□□ -1.69
PRKD3-202ENST00000379066 FOXD4Q12950 439 aaPredicted RBP4.52□□□□□ -1.69
PRKD3-202ENST00000379066 TERF2IPQ9NYB0 399 aa4.52□□□□□ -1.69
PRKD3-202ENST00000379066 ATAD2BQ9ULI0 1458 aa4.52□□□□□ -1.69
PRKD3-202ENST00000379066 VGFO15240 615 aaPredicted RBP4.52□□□□□ -1.69
PRKD3-202ENST00000379066 GET4Q7L5D6 327 aaPredicted RBP4.52□□□□□ -1.69
PRKD3-202ENST00000379066 C16orf71Q8IYS4 520 aaPredicted RBP4.52□□□□□ -1.69
PRKD3-202ENST00000379066 FRAT1Q92837 279 aaPredicted RBP4.52□□□□□ -1.69
PRKD3-202ENST00000379066 MARCH6O60337 910 aa4.51□□□□□ -1.69
PRKD3-202ENST00000379066 KIF4AO95239 1232 aa4.51□□□□□ -1.69
PRKD3-202ENST00000379066 RRAGDQ9NQL2 400 aaPredicted RBP4.51□□□□□ -1.69
PRKD3-202ENST00000379066 SNAPC4Q5SXM2 1469 aa4.51□□□□□ -1.69
PRKD3-202ENST00000379066 GPBP1L1Q9HC44 474 aaPredicted RBP4.51□□□□□ -1.69
PRKD3-202ENST00000379066 MROH2BQ7Z745 1585 aa4.51□□□□□ -1.69
PRKD3-202ENST00000379066 ERICH4A6NGS2 130 aa4.51□□□□□ -1.69
PRKD3-202ENST00000379066 CALR3Q96L12 384 aaKnown RBP4.51□□□□□ -1.69
PRKD3-202ENST00000379066 CCNB3Q8WWL7 1395 aa4.51□□□□□ -1.69
PRKD3-202ENST00000379066 NBPF20Q3BBV1 942 aa4.51□□□□□ -1.69
PRKD3-202ENST00000379066 RRP7BPQ9NSQ0 103 aa4.51□□□□□ -1.69
PRKD3-202ENST00000379066 ZNF330Q9Y3S2 320 aaPredicted RBP4.51□□□□□ -1.69
PRKD3-202ENST00000379066 SYNJ1O43426 1573 aa4.51□□□□□ -1.69
PRKD3-202ENST00000379066 CENPJQ9HC77 1338 aaPredicted RBP4.5□□□□□ -1.69
PRKD3-202ENST00000379066 NUTM2FA1L443 756 aa4.5□□□□□ -1.69
PRKD3-202ENST00000379066 EFCAB2Q5VUJ9 269 aa4.5□□□□□ -1.69
PRKD3-202ENST00000379066 RBM27Q9P2N5 1060 aaKnown RBP4.5□□□□□ -1.69
PRKD3-202ENST00000379066 RNF217Q8TC41 542 aa4.5□□□□□ -1.69
PRKD3-202ENST00000379066 TPM2P07951 284 aa4.5□□□□□ -1.69
PRKD3-202ENST00000379066 ANP32CO43423 234 aa4.5□□□□□ -1.69
PRKD3-202ENST00000379066 RIPOR2Q9Y4F9 1068 aa4.5□□□□□ -1.69
PRKD3-202ENST00000379066 PROCA1Q8NCQ7 364 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-202ENST00000379066 UNC13AQ9UPW8 1703 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 PRG4Q92954 1404 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-202ENST00000379066 GOLGA6CA6NDK9 693 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 GOLGA6BA6NDN3 693 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 GOLGA6DP0CG33 693 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 GOLGA6AQ9NYA3 693 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 KCNJ4P48050 445 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 NAP1L1P55209 391 aaKnown RBP4.49□□□□□ -1.69
PRKD3-202ENST00000379066 CCDC181Q5TID7 509 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 NUTM2GQ5VZR2 741 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 SYTL4Q96C24 671 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-202ENST00000379066 IPO8O15397 1037 aaKnown RBP4.49□□□□□ -1.69
PRKD3-202ENST00000379066 MAP2K1Q02750 393 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-202ENST00000379066 DMTNQ08495 405 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 MFSD4BQ5TF39 518 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 TRIM6-TRIM34B2RNG4 842 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 PROSER2Q86WR7 435 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-202ENST00000379066 TRIM34Q9BYJ4 488 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 RAD54L2Q9Y4B4 1467 aa4.49□□□□□ -1.69
PRKD3-202ENST00000379066 KIF3BO15066 747 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 CARMIL1Q5VZK9 1371 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 SRPK2P78362 688 aaKnown RBP4.48□□□□□ -1.69
PRKD3-202ENST00000379066 IPO9Q96P70 1041 aaKnown RBP4.48□□□□□ -1.69
PRKD3-202ENST00000379066 MYH16Q9H6N6 1097 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 ERBB3P21860 1342 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 NPM3O75607 178 aaKnown RBP4.48□□□□□ -1.69
PRKD3-202ENST00000379066 CCDC96Q2M329 555 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 NBPF6Q5VWK0 638 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 NBPF5PQ86XG9 351 aaPredicted RBP4.48□□□□□ -1.69
PRKD3-202ENST00000379066 CCDC82Q8N4S0 544 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 NBPF4Q96M43 638 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 PNMA2Q9UL42 364 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 CEP120Q8N960 986 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 TOM1O60784 492 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 NBPF9Q3BBW0 867 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 ZNF771Q7L3S4 317 aaPredicted RBP4.48□□□□□ -1.69
PRKD3-202ENST00000379066 GAPVD1Q14C86 1478 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 LMTK3Q96Q04 1460 aa4.48□□□□□ -1.69
PRKD3-202ENST00000379066 WASHC2AQ641Q2 1341 aa4.47□□□□□ -1.69
PRKD3-202ENST00000379066 TPD52L2O43399 206 aaKnown RBP4.47□□□□□ -1.69
PRKD3-202ENST00000379066 OTUD6BQ8N6M0 293 aa4.47□□□□□ -1.69
PRKD3-202ENST00000379066 SPAG9O60271 1321 aaKnown RBP4.47□□□□□ -1.69
PRKD3-202ENST00000379066 PES1O00541 588 aaKnown RBP4.47□□□□□ -1.69
PRKD3-202ENST00000379066 GORABQ5T7V8 394 aa4.47□□□□□ -1.69
PRKD3-202ENST00000379066 FBXW7Q969H0 707 aa4.47□□□□□ -1.69
PRKD3-202ENST00000379066 HNRNPMP52272 730 aaKnown RBP eCLIP4.47□□□□□ -1.69
PRKD3-202ENST00000379066 UTP14CQ5TAP6 766 aaKnown RBP4.47□□□□□ -1.69
PRKD3-202ENST00000379066 DNAJC14Q6Y2X3 702 aaPredicted RBP4.47□□□□□ -1.69
PRKD3-202ENST00000379066 NGDNQ8NEJ9 315 aaKnown RBP4.47□□□□□ -1.69
PRKD3-202ENST00000379066 MAP7D2Q96T17 732 aa4.47□□□□□ -1.69
PRKD3-202ENST00000379066 CCDC88BA6NC98 1476 aa4.46□□□□□ -1.69
PRKD3-202ENST00000379066 LAMC3Q9Y6N6 1575 aa4.46□□□□□ -1.69
PRKD3-202ENST00000379066 EVI5LQ96CN4 794 aa4.46□□□□□ -1.69
PRKD3-202ENST00000379066 CTDP1Q9Y5B0 961 aaPredicted RBP4.46□□□□□ -1.69
PRKD3-202ENST00000379066 TSHZ1Q6ZSZ6 1077 aa4.46□□□□□ -1.7
PRKD3-202ENST00000379066 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.46□□□□□ -1.7
PRKD3-202ENST00000379066 SSFA2P28290 1259 aa4.46□□□□□ -1.7
PRKD3-202ENST00000379066 TDO2P48775 406 aa4.46□□□□□ -1.7
PRKD3-202ENST00000379066 ZNF280DQ6N043 979 aa4.46□□□□□ -1.7
PRKD3-202ENST00000379066 TOP2AP11388 1531 aaKnown RBP4.46□□□□□ -1.7
PRKD3-202ENST00000379066 GOLGA3Q08378 1498 aa4.46□□□□□ -1.7
PRKD3-202ENST00000379066 LETM1O95202 739 aaPredicted RBP4.46□□□□□ -1.7
PRKD3-202ENST00000379066 ADAMTS2O95450 1211 aa4.46□□□□□ -1.7
PRKD3-202ENST00000379066 ZRSR2Q15696 482 aaKnown RBP4.46□□□□□ -1.7
PRKD3-202ENST00000379066 PAIP2Q9BPZ3 127 aaKnown RBP4.46□□□□□ -1.7
PRKD3-202ENST00000379066 ISY1Q9ULR0 285 aaKnown RBP4.46□□□□□ -1.7
PRKD3-202ENST00000379066 KIF21AQ7Z4S6 1674 aa4.46□□□□□ -1.7
PRKD3-202ENST00000379066 SCP2P22307 547 aa4.45□□□□□ -1.7
PRKD3-202ENST00000379066 PDE6BP35913 854 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms