RNA–Protein interactions for RNA: ENST00000377663.3

KLHL21-202, Transcript of kelch like family member 21, humanhuman

TSL 1 (best) BASIC

Gene KLHL21, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL21-202ENST00000377663 PTPRGP23470 1445 aa21.4■■□□□ 1.02
KLHL21-202ENST00000377663 SYNE3Q6ZMZ3 975 aa21.4■■□□□ 1.02
KLHL21-202ENST00000377663 SYTL4Q96C24 671 aaPredicted RBP21.4■■□□□ 1.02
KLHL21-202ENST00000377663 RIPK4P57078 832 aa21.38■■□□□ 1.01
KLHL21-202ENST00000377663 GOLGA6L19H0YKK7 550 aa21.37■■□□□ 1.01
KLHL21-202ENST00000377663 PSME1Q06323 249 aa21.37■■□□□ 1.01
KLHL21-202ENST00000377663 ANO2Q9NQ90 1003 aa21.37■■□□□ 1.01
KLHL21-202ENST00000377663 IFIT2P09913 472 aaKnown RBP21.36■■□□□ 1.01
KLHL21-202ENST00000377663 APPP05067 770 aa21.36■■□□□ 1.01
KLHL21-202ENST00000377663 NOL10Q9BSC4 688 aaKnown RBP21.36■■□□□ 1.01
KLHL21-202ENST00000377663 ATP6V1DQ9Y5K8 247 aa21.36■■□□□ 1.01
KLHL21-202ENST00000377663 BECN2A8MW95 431 aa21.35■■□□□ 1.01
KLHL21-202ENST00000377663 ZBED9Q6R2W3 1325 aa21.35■■□□□ 1.01
KLHL21-202ENST00000377663 RUFY2Q8WXA3 655 aa21.34■■□□□ 1.01
KLHL21-202ENST00000377663 TSR1Q2NL82 804 aaKnown RBP21.34■■□□□ 1.01
KLHL21-202ENST00000377663 TRIM34Q9BYJ4 488 aa21.34■■□□□ 1.01
KLHL21-202ENST00000377663 DDX19BQ9UMR2 479 aa21.34■■□□□ 1.01
KLHL21-202ENST00000377663 AMOTL1Q8IY63 956 aa21.34■■□□□ 1.01
KLHL21-202ENST00000377663 LRRFIP1Q32MZ4 808 aaKnown RBP21.34■■□□□ 1.01
KLHL21-202ENST00000377663 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1.01
KLHL21-202ENST00000377663 TNNT3P45378 269 aaPredicted RBP21.33■■□□□ 1
KLHL21-202ENST00000377663 CHMP4CQ96CF2 233 aa21.33■■□□□ 1
KLHL21-202ENST00000377663 FBXW7Q969H0 707 aa21.32■■□□□ 1
KLHL21-202ENST00000377663 FKBP5Q13451 457 aaPredicted RBP21.32■■□□□ 1
KLHL21-202ENST00000377663 CCAR2Q8N163 923 aaKnown RBP21.32■■□□□ 1
KLHL21-202ENST00000377663 TRIM29Q14134 588 aa21.32■■□□□ 1
KLHL21-202ENST00000377663 WWC1Q8IX03 1113 aa21.32■■□□□ 1
KLHL21-202ENST00000377663 DZIP1LQ8IYY4 767 aaKnown RBP21.32■■□□□ 1
KLHL21-202ENST00000377663 ZKSCAN1P17029 563 aaPredicted RBP21.31■■□□□ 1
KLHL21-202ENST00000377663 VPS37DQ86XT2 251 aa21.31■■□□□ 1
KLHL21-202ENST00000377663 TPM2P07951 284 aa21.31■■□□□ 1
KLHL21-202ENST00000377663 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.31■■□□□ 1
KLHL21-202ENST00000377663 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
KLHL21-202ENST00000377663 REC8O95072 547 aa21.3■■□□□ 1
KLHL21-202ENST00000377663 DDX58O95786 925 aaKnown RBP21.3■■□□□ 1
KLHL21-202ENST00000377663 CPLX2Q6PUV4 134 aaKnown RBP21.3■■□□□ 1
KLHL21-202ENST00000377663 TCEAL9Q9UHQ7 104 aa21.3■■□□□ 1
KLHL21-202ENST00000377663 API5Q9BZZ5 524 aaKnown RBP21.3■■□□□ 1
KLHL21-202ENST00000377663 HMOX1P09601 288 aa21.29■■□□□ 1
KLHL21-202ENST00000377663 SKOR2Q2VWA4 1001 aaPredicted RBP21.29■■□□□ 1
KLHL21-202ENST00000377663 DHX16O60231 1041 aaKnown RBP21.29■■□□□ 1
KLHL21-202ENST00000377663 G3BP1Q13283 466 aaKnown RBP eCLIP21.29■■□□□ 1
KLHL21-202ENST00000377663 CTDP1Q9Y5B0 961 aaPredicted RBP21.28■■□□□ 1
KLHL21-202ENST00000377663 CPLX1O14810 134 aa21.28■■□□□ 1
KLHL21-202ENST00000377663 MEX3CQ5U5Q3 659 aaKnown RBP21.28■■□□□ 1
KLHL21-202ENST00000377663 TSPYL4Q9UJ04 414 aa21.28■■□□□ 1
KLHL21-202ENST00000377663 TPM1P09493 284 aa21.27■■□□□ 1
KLHL21-202ENST00000377663 RUNDC1Q96C34 613 aa21.27■□□□□ 0.99
KLHL21-202ENST00000377663 PCMTD1Q96MG8 357 aaPredicted RBP21.26■□□□□ 0.99
KLHL21-202ENST00000377663 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
KLHL21-202ENST00000377663 NFXL1Q6ZNB6 911 aa21.25■□□□□ 0.99
KLHL21-202ENST00000377663 FOSBP53539 338 aa21.25■□□□□ 0.99
KLHL21-202ENST00000377663 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
KLHL21-202ENST00000377663 TRDNQ13061 729 aa21.24■□□□□ 0.99
KLHL21-202ENST00000377663 NUTM2GQ5VZR2 741 aa21.24■□□□□ 0.99
KLHL21-202ENST00000377663 USP35Q9P2H5 1018 aa21.24■□□□□ 0.99
KLHL21-202ENST00000377663 ZNF592Q92610 1267 aa21.23■□□□□ 0.99
KLHL21-202ENST00000377663 AIMP1Q12904 312 aaKnown RBP21.22■□□□□ 0.99
KLHL21-202ENST00000377663 GSE1Q14687 1217 aa21.22■□□□□ 0.99
KLHL21-202ENST00000377663 BICD2Q8TD16 824 aa21.22■□□□□ 0.99
KLHL21-202ENST00000377663 RNF20Q5VTR2 975 aa21.22■□□□□ 0.99
KLHL21-202ENST00000377663 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.21■□□□□ 0.99
KLHL21-202ENST00000377663 GGNBP2Q9H3C7 697 aa21.21■□□□□ 0.99
KLHL21-202ENST00000377663 CABP2Q9NPB3 220 aa21.21■□□□□ 0.99
KLHL21-202ENST00000377663 ZNF644Q9H582 1327 aaPredicted RBP21.2■□□□□ 0.98
KLHL21-202ENST00000377663 VPS37CA5D8V6 355 aaPredicted RBP21.2■□□□□ 0.98
KLHL21-202ENST00000377663 OSCARQ8IYS5 282 aa21.2■□□□□ 0.98
KLHL21-202ENST00000377663 LNPKQ9C0E8 428 aa21.2■□□□□ 0.98
KLHL21-202ENST00000377663 GNAI1P63096 354 aa21.2■□□□□ 0.98
KLHL21-202ENST00000377663 RAPGEF4Q8WZA2 1011 aa21.2■□□□□ 0.98
KLHL21-202ENST00000377663 RIC3Q7Z5B4 369 aa21.2■□□□□ 0.98
KLHL21-202ENST00000377663 ERICH2A1L162 156 aa21.19■□□□□ 0.98
KLHL21-202ENST00000377663 FAM69CQ0P6D2 419 aa21.19■□□□□ 0.98
KLHL21-202ENST00000377663 INTS3Q68E01 1043 aaKnown RBP21.18■□□□□ 0.98
KLHL21-202ENST00000377663 CCDC47Q96A33 483 aaKnown RBP21.18■□□□□ 0.98
KLHL21-202ENST00000377663 NEUROD6Q96NK8 337 aa21.18■□□□□ 0.98
KLHL21-202ENST00000377663 MYOM3Q5VTT5 1437 aa21.18■□□□□ 0.98
KLHL21-202ENST00000377663 SAMD1Q6SPF0 538 aaPredicted RBP21.18■□□□□ 0.98
KLHL21-202ENST00000377663 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
KLHL21-202ENST00000377663 SMC3Q9UQE7 1217 aa21.17■□□□□ 0.98
KLHL21-202ENST00000377663 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
KLHL21-202ENST00000377663 ATF3P18847 181 aa21.17■□□□□ 0.98
KLHL21-202ENST00000377663 FYB1O15117 783 aa21.16■□□□□ 0.98
KLHL21-202ENST00000377663 NLRP2Q9NX02 1062 aa21.16■□□□□ 0.98
KLHL21-202ENST00000377663 TMEM132EQ6IEE7 984 aa21.16■□□□□ 0.98
KLHL21-202ENST00000377663 PANK1Q8TE04 598 aa21.15■□□□□ 0.98
KLHL21-202ENST00000377663 CCDC70Q6NSX1 233 aa21.15■□□□□ 0.98
KLHL21-202ENST00000377663 ERC2O15083 957 aa21.15■□□□□ 0.98
KLHL21-202ENST00000377663 ANKRD20A12PQ8NF67 263 aa21.15■□□□□ 0.98
KLHL21-202ENST00000377663 RBM33Q96EV2 1170 aaKnown RBP21.15■□□□□ 0.98
KLHL21-202ENST00000377663 KIF7Q2M1P5 1343 aa21.14■□□□□ 0.98
KLHL21-202ENST00000377663 KLHL34Q8N239 644 aa21.14■□□□□ 0.98
KLHL21-202ENST00000377663 WASHC4Q2M389 1173 aa21.14■□□□□ 0.97
KLHL21-202ENST00000377663 HSP90AB4PQ58FF6 505 aa21.14■□□□□ 0.97
KLHL21-202ENST00000377663 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
KLHL21-202ENST00000377663 HOOK1Q9UJC3 728 aaKnown RBP21.13■□□□□ 0.97
KLHL21-202ENST00000377663 CHMP5Q9NZZ3 219 aa21.13■□□□□ 0.97
KLHL21-202ENST00000377663 IPO7O95373 1038 aaKnown RBP21.13■□□□□ 0.97
KLHL21-202ENST00000377663 CCDC7Q96M83 1385 aa21.12■□□□□ 0.97
KLHL21-202ENST00000377663 CCDC27Q2M243 656 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms