RNA–Protein interactions for RNA: ENST00000377190.7

SYVN1-203, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 3,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-203ENST00000377190 ATP10AO60312 1499 aa22.47■■□□□ 1.19
SYVN1-203ENST00000377190 TMEM132EQ6IEE7 984 aa22.47■■□□□ 1.19
SYVN1-203ENST00000377190 PLXNC1O60486 1568 aa22.47■■□□□ 1.19
SYVN1-203ENST00000377190 CDCA8Q53HL2 280 aa22.46■■□□□ 1.19
SYVN1-203ENST00000377190 DUSP27Q5VZP5 1158 aa22.46■■□□□ 1.19
SYVN1-203ENST00000377190 RGS3P49796 1198 aa22.46■■□□□ 1.19
SYVN1-203ENST00000377190 KANK1Q14678 1352 aa22.46■■□□□ 1.19
SYVN1-203ENST00000377190 BLMP54132 1417 aaPredicted RBP22.46■■□□□ 1.19
SYVN1-203ENST00000377190 SLC4A3P48751 1232 aa22.45■■□□□ 1.18
SYVN1-203ENST00000377190 RRP7AQ9Y3A4 280 aaKnown RBP22.45■■□□□ 1.18
SYVN1-203ENST00000377190 DMRT2Q9Y5R5 561 aa22.44■■□□□ 1.18
SYVN1-203ENST00000377190 ABCC1P33527 1531 aa22.44■■□□□ 1.18
SYVN1-203ENST00000377190 RTL5Q5HYW3 569 aaPredicted RBP22.44■■□□□ 1.18
SYVN1-203ENST00000377190 BACH2Q9BYV9 841 aa22.44■■□□□ 1.18
SYVN1-203ENST00000377190 BCAR3O75815 825 aa22.44■■□□□ 1.18
SYVN1-203ENST00000377190 SAFB2Q14151 953 aaKnown RBP eCLIP22.44■■□□□ 1.18
SYVN1-203ENST00000377190 CARD14Q9BXL6 1004 aa22.44■■□□□ 1.18
SYVN1-203ENST00000377190 EIF2AK4Q9P2K8 1649 aaKnown RBP22.42■■□□□ 1.18
SYVN1-203ENST00000377190 SHROOM2Q13796 1616 aa22.42■■□□□ 1.18
SYVN1-203ENST00000377190 SCAF11Q99590 1463 aaKnown RBP22.42■■□□□ 1.18
SYVN1-203ENST00000377190 FANCAO15360 1455 aa22.4■■□□□ 1.18
SYVN1-203ENST00000377190 SLC12A5Q9H2X9 1139 aa22.39■■□□□ 1.17
SYVN1-203ENST00000377190 CLTCL1P53675 1640 aa22.38■■□□□ 1.17
SYVN1-203ENST00000377190 MADDQ8WXG6 1647 aa22.36■■□□□ 1.17
SYVN1-203ENST00000377190 ZMYM4Q5VZL5 1548 aa22.36■■□□□ 1.17
SYVN1-203ENST00000377190 CFAP65Q6ZU64 1925 aaKnown RBP22.35■■□□□ 1.17
SYVN1-203ENST00000377190 ADGRL1O94910 1474 aa22.35■■□□□ 1.17
SYVN1-203ENST00000377190 EIF3AQ14152 1382 aaKnown RBP22.35■■□□□ 1.17
SYVN1-203ENST00000377190 SLFN5Q08AF3 891 aa22.35■■□□□ 1.17
SYVN1-203ENST00000377190 ZFYVE16Q7Z3T8 1539 aa22.35■■□□□ 1.17
SYVN1-203ENST00000377190 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
SYVN1-203ENST00000377190 FRAT1Q92837 279 aaPredicted RBP22.34■■□□□ 1.17
SYVN1-203ENST00000377190 MORC1Q86VD1 984 aa22.32■■□□□ 1.16
SYVN1-203ENST00000377190 BCL2L13Q9BXK5 485 aa22.32■■□□□ 1.16
SYVN1-203ENST00000377190 ASXL1Q8IXJ9 1541 aa22.32■■□□□ 1.16
SYVN1-203ENST00000377190 NEFMP07197 916 aa22.32■■□□□ 1.16
SYVN1-203ENST00000377190 TRPM2O94759 1503 aa22.31■■□□□ 1.16
SYVN1-203ENST00000377190 LAMC1P11047 1609 aa22.3■■□□□ 1.16
SYVN1-203ENST00000377190 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.3■■□□□ 1.16
SYVN1-203ENST00000377190 PTPRTO14522 1441 aa22.3■■□□□ 1.16
SYVN1-203ENST00000377190 MS4A1P11836 297 aa22.29■■□□□ 1.16
SYVN1-203ENST00000377190 ATP7AQ04656 1500 aa22.29■■□□□ 1.16
SYVN1-203ENST00000377190 ZNF521Q96K83 1311 aa22.29■■□□□ 1.16
SYVN1-203ENST00000377190 PANK1Q8TE04 598 aa22.29■■□□□ 1.16
SYVN1-203ENST00000377190 STK26Q9P289 416 aa22.29■■□□□ 1.16
SYVN1-203ENST00000377190 NOS1P29475 1434 aa22.29■■□□□ 1.16
SYVN1-203ENST00000377190 CENPJQ9HC77 1338 aaPredicted RBP22.28■■□□□ 1.16
SYVN1-203ENST00000377190 NPM1P06748 294 aaKnown RBP eCLIP22.28■■□□□ 1.16
SYVN1-203ENST00000377190 RNF17Q9BXT8 1623 aaKnown RBP22.28■■□□□ 1.16
SYVN1-203ENST00000377190 RTEL1-TNFRSF6BF6WH68 1400 aa22.27■■□□□ 1.16
SYVN1-203ENST00000377190 COG6Q9Y2V7 657 aa22.27■■□□□ 1.16
SYVN1-203ENST00000377190 RAPGEF3O95398 923 aa22.26■■□□□ 1.15
SYVN1-203ENST00000377190 SPHKAPQ2M3C7 1700 aa22.26■■□□□ 1.15
SYVN1-203ENST00000377190 ERVK-7P63135 1459 aa22.25■■□□□ 1.15
SYVN1-203ENST00000377190 CENPQQ7L2Z9 268 aaPredicted RBP22.25■■□□□ 1.15
SYVN1-203ENST00000377190 ASXL2Q76L83 1435 aa22.24■■□□□ 1.15
SYVN1-203ENST00000377190 CLUAP1Q96AJ1 413 aa22.24■■□□□ 1.15
SYVN1-203ENST00000377190 KDM2BQ8NHM5 1336 aa22.24■■□□□ 1.15
SYVN1-203ENST00000377190 IQGAP1P46940 1657 aa22.24■■□□□ 1.15
SYVN1-203ENST00000377190 TNNQ9UQP3 1299 aa22.24■■□□□ 1.15
SYVN1-203ENST00000377190 UHRF1BP1LA0JNW5 1464 aa22.24■■□□□ 1.15
SYVN1-203ENST00000377190 DAXXQ9UER7 740 aaPredicted RBP22.23■■□□□ 1.15
SYVN1-203ENST00000377190 NSD3Q9BZ95 1437 aa22.23■■□□□ 1.15
SYVN1-203ENST00000377190 CLASP1Q7Z460 1538 aa22.22■■□□□ 1.15
SYVN1-203ENST00000377190 CABP2Q9NPB3 220 aa22.22■■□□□ 1.15
SYVN1-203ENST00000377190 MTHFSP49914 203 aa22.22■■□□□ 1.15
SYVN1-203ENST00000377190 IGHDP01880 384 aa22.21■■□□□ 1.15
SYVN1-203ENST00000377190 WWC1Q8IX03 1113 aa22.21■■□□□ 1.15
SYVN1-203ENST00000377190 E9PSI1 815 aa22.21■■□□□ 1.15
SYVN1-203ENST00000377190 PIK3C2GO75747 1445 aa22.2■■□□□ 1.14
SYVN1-203ENST00000377190 SYNMO15061 1565 aa22.2■■□□□ 1.14
SYVN1-203ENST00000377190 STAC3Q96MF2 364 aa22.2■■□□□ 1.14
SYVN1-203ENST00000377190 TCP11L2Q8N4U5 519 aa22.19■■□□□ 1.14
SYVN1-203ENST00000377190 CEP152O94986 1710 aa22.18■■□□□ 1.14
SYVN1-203ENST00000377190 U2AF1L5P0DN76 240 aaPredicted RBP22.17■■□□□ 1.14
SYVN1-203ENST00000377190 U2AF1Q01081 240 aaKnown RBP eCLIP22.17■■□□□ 1.14
SYVN1-203ENST00000377190 TET3O43151 1660 aa22.17■■□□□ 1.14
SYVN1-203ENST00000377190 ABCA6Q8N139 1617 aa22.15■■□□□ 1.14
SYVN1-203ENST00000377190 C8orf34Q49A92 452 aa22.15■■□□□ 1.14
SYVN1-203ENST00000377190 INSRP06213 1382 aa22.15■■□□□ 1.14
SYVN1-203ENST00000377190 NKTRP30414 1462 aaKnown RBP22.15■■□□□ 1.14
SYVN1-203ENST00000377190 FAM161AQ3B820 660 aa22.15■■□□□ 1.14
SYVN1-203ENST00000377190 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
SYVN1-203ENST00000377190 TRMT2AQ8IZ69 625 aaKnown RBP22.15■■□□□ 1.14
SYVN1-203ENST00000377190 MYOM1P52179 1685 aa22.14■■□□□ 1.14
SYVN1-203ENST00000377190 KDM5AP29375 1690 aaKnown RBP22.14■■□□□ 1.13
SYVN1-203ENST00000377190 SRPK2P78362 688 aaKnown RBP22.12■■□□□ 1.13
SYVN1-203ENST00000377190 C14orf93Q9H972 538 aaKnown RBP22.12■■□□□ 1.13
SYVN1-203ENST00000377190 GGNBP2Q9H3C7 697 aa22.12■■□□□ 1.13
SYVN1-203ENST00000377190 RTN4Q9NQC3 1192 aaKnown RBP22.12■■□□□ 1.13
SYVN1-203ENST00000377190 MAP3K4Q9Y6R4 1608 aa22.11■■□□□ 1.13
SYVN1-203ENST00000377190 NPATQ14207 1427 aa22.11■■□□□ 1.13
SYVN1-203ENST00000377190 INO80Q9ULG1 1556 aaPredicted RBP22.1■■□□□ 1.13
SYVN1-203ENST00000377190 RLBP1P12271 317 aa22.1■■□□□ 1.13
SYVN1-203ENST00000377190 DDRGK1Q96HY6 314 aa22.1■■□□□ 1.13
SYVN1-203ENST00000377190 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
SYVN1-203ENST00000377190 TSR2Q969E8 191 aaKnown RBP22.09■■□□□ 1.13
SYVN1-203ENST00000377190 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
SYVN1-203ENST00000377190 NPC1L1Q9UHC9 1359 aa22.09■■□□□ 1.13
SYVN1-203ENST00000377190 CD109Q6YHK3 1445 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms