RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 RNF17Q9BXT8 1623 aaKnown RBP29.94■■■□□ 2.38
FOXA2-201ENST00000377115 SYCP2Q9BX26 1530 aa29.94■■■□□ 2.38
FOXA2-201ENST00000377115 CCDC146Q8IYE0 955 aa29.92■■■□□ 2.38
FOXA2-201ENST00000377115 SPINK5Q9NQ38 1064 aaPredicted RBP29.91■■■□□ 2.38
FOXA2-201ENST00000377115 IQGAP3Q86VI3 1631 aa29.91■■■□□ 2.38
FOXA2-201ENST00000377115 RSPH4AQ5TD94 716 aa29.91■■■□□ 2.38
FOXA2-201ENST00000377115 CLASP1Q7Z460 1538 aa29.9■■■□□ 2.38
FOXA2-201ENST00000377115 BCAR3O75815 825 aa29.88■■■□□ 2.37
FOXA2-201ENST00000377115 TRMT2AQ8IZ69 625 aaKnown RBP29.87■■■□□ 2.37
FOXA2-201ENST00000377115 EIF3AQ14152 1382 aaKnown RBP29.87■■■□□ 2.37
FOXA2-201ENST00000377115 MAST1Q9Y2H9 1570 aa29.84■■■□□ 2.37
FOXA2-201ENST00000377115 IGHDP01880 384 aa29.83■■■□□ 2.37
FOXA2-201ENST00000377115 NKTRP30414 1462 aaKnown RBP29.83■■■□□ 2.37
FOXA2-201ENST00000377115 ATP10AO60312 1499 aa29.83■■■□□ 2.37
FOXA2-201ENST00000377115 PIK3C2GO75747 1445 aa29.83■■■□□ 2.37
FOXA2-201ENST00000377115 USP19O94966 1318 aa29.82■■■□□ 2.36
FOXA2-201ENST00000377115 APAF1O14727 1248 aa29.82■■■□□ 2.36
FOXA2-201ENST00000377115 ASXL1Q8IXJ9 1541 aa29.82■■■□□ 2.36
FOXA2-201ENST00000377115 SYNMO15061 1565 aa29.81■■■□□ 2.36
FOXA2-201ENST00000377115 IQGAP1P46940 1657 aa29.8■■■□□ 2.36
FOXA2-201ENST00000377115 ARHGAP5Q13017 1502 aa29.8■■■□□ 2.36
FOXA2-201ENST00000377115 VIRMAQ69YN4 1812 aaKnown RBP29.79■■■□□ 2.36
FOXA2-201ENST00000377115 MADDQ8WXG6 1647 aa29.78■■■□□ 2.36
FOXA2-201ENST00000377115 DMRT2Q9Y5R5 561 aa29.77■■■□□ 2.36
FOXA2-201ENST00000377115 PLXNC1O60486 1568 aa29.76■■■□□ 2.36
FOXA2-201ENST00000377115 SEC24BO95487 1268 aa29.76■■■□□ 2.36
FOXA2-201ENST00000377115 TTC37Q6PGP7 1564 aa29.76■■■□□ 2.36
FOXA2-201ENST00000377115 ABCC2Q92887 1545 aa29.75■■■□□ 2.35
FOXA2-201ENST00000377115 MYOM1P52179 1685 aa29.74■■■□□ 2.35
FOXA2-201ENST00000377115 E9PSI1 815 aa29.72■■■□□ 2.35
FOXA2-201ENST00000377115 CDCA8Q53HL2 280 aa29.72■■■□□ 2.35
FOXA2-201ENST00000377115 POGKQ9P215 609 aa29.71■■■□□ 2.35
FOXA2-201ENST00000377115 DUOX2Q9NRD8 1548 aa29.71■■■□□ 2.35
FOXA2-201ENST00000377115 SCAF11Q99590 1463 aaKnown RBP29.7■■■□□ 2.35
FOXA2-201ENST00000377115 ERCC6Q03468 1493 aa29.69■■■□□ 2.34
FOXA2-201ENST00000377115 EIF5BO60841 1220 aaKnown RBP29.69■■■□□ 2.34
FOXA2-201ENST00000377115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.68■■■□□ 2.34
FOXA2-201ENST00000377115 NPC1L1Q9UHC9 1359 aa29.68■■■□□ 2.34
FOXA2-201ENST00000377115 PANK1Q8TE04 598 aa29.67■■■□□ 2.34
FOXA2-201ENST00000377115 COG6Q9Y2V7 657 aa29.67■■■□□ 2.34
FOXA2-201ENST00000377115 CGNL1Q0VF96 1302 aa29.67■■■□□ 2.34
FOXA2-201ENST00000377115 CLUAP1Q96AJ1 413 aa29.67■■■□□ 2.34
FOXA2-201ENST00000377115 SLKQ9H2G2 1235 aaPredicted RBP29.67■■■□□ 2.34
FOXA2-201ENST00000377115 FAM43AQ8N2R8 423 aa29.66■■■□□ 2.34
FOXA2-201ENST00000377115 MAPK8IP3Q9UPT6 1336 aa29.65■■■□□ 2.34
FOXA2-201ENST00000377115 NLRP1Q9C000 1473 aa29.65■■■□□ 2.34
FOXA2-201ENST00000377115 PDE3AQ14432 1141 aa29.64■■■□□ 2.34
FOXA2-201ENST00000377115 CANXP27824 592 aaKnown RBP29.63■■■□□ 2.33
FOXA2-201ENST00000377115 CENPJQ9HC77 1338 aaPredicted RBP29.63■■■□□ 2.33
FOXA2-201ENST00000377115 SPHKAPQ2M3C7 1700 aa29.62■■■□□ 2.33
FOXA2-201ENST00000377115 BECN1Q14457 450 aa29.62■■■□□ 2.33
FOXA2-201ENST00000377115 SCAPERQ9BY12 1400 aa29.6■■■□□ 2.33
FOXA2-201ENST00000377115 KDM5AP29375 1690 aaKnown RBP29.58■■■□□ 2.33
FOXA2-201ENST00000377115 NINLQ9Y2I6 1382 aa29.56■■■□□ 2.32
FOXA2-201ENST00000377115 WWC1Q8IX03 1113 aa29.56■■■□□ 2.32
FOXA2-201ENST00000377115 CARD14Q9BXL6 1004 aa29.55■■■□□ 2.32
FOXA2-201ENST00000377115 ANTXR1Q9H6X2 564 aa29.55■■■□□ 2.32
FOXA2-201ENST00000377115 TRPM2O94759 1503 aa29.54■■■□□ 2.32
FOXA2-201ENST00000377115 CEP152O94986 1710 aa29.54■■■□□ 2.32
FOXA2-201ENST00000377115 CLTCL1P53675 1640 aa29.52■■■□□ 2.32
FOXA2-201ENST00000377115 RSPH6AQ9H0K4 717 aa29.51■■■□□ 2.31
FOXA2-201ENST00000377115 NGEFQ8N5V2 710 aa29.51■■■□□ 2.31
FOXA2-201ENST00000377115 TNNQ9UQP3 1299 aa29.51■■■□□ 2.31
FOXA2-201ENST00000377115 PCDHB15Q9Y5E8 787 aa29.5■■■□□ 2.31
FOXA2-201ENST00000377115 ERVK-7P63135 1459 aa29.49■■■□□ 2.31
FOXA2-201ENST00000377115 NEUROD2Q15784 382 aa29.49■■■□□ 2.31
FOXA2-201ENST00000377115 UBE2Q2Q8WVN8 375 aa29.49■■■□□ 2.31
FOXA2-201ENST00000377115 TBC1D32Q96NH3 1257 aa29.48■■■□□ 2.31
FOXA2-201ENST00000377115 RLBP1P12271 317 aa29.47■■■□□ 2.31
FOXA2-201ENST00000377115 TBC1D2Q9BYX2 928 aa29.47■■■□□ 2.31
FOXA2-201ENST00000377115 RRP7AQ9Y3A4 280 aaKnown RBP29.47■■■□□ 2.31
FOXA2-201ENST00000377115 RARSP54136 660 aaKnown RBP29.46■■■□□ 2.31
FOXA2-201ENST00000377115 RRAGDQ9NQL2 400 aaPredicted RBP29.46■■■□□ 2.31
FOXA2-201ENST00000377115 PMFBP1Q8TBY8 1022 aa29.46■■■□□ 2.31
FOXA2-201ENST00000377115 UPF2Q9HAU5 1272 aaKnown RBP29.45■■■□□ 2.31
FOXA2-201ENST00000377115 TRAPPC8Q9Y2L5 1435 aa29.45■■■□□ 2.3
FOXA2-201ENST00000377115 PDZRN3Q9UPQ7 1066 aa29.45■■■□□ 2.3
FOXA2-201ENST00000377115 PTPRTO14522 1441 aa29.44■■■□□ 2.3
FOXA2-201ENST00000377115 CFAP70Q5T0N1 1121 aa29.44■■■□□ 2.3
FOXA2-201ENST00000377115 STAC3Q96MF2 364 aa29.44■■■□□ 2.3
FOXA2-201ENST00000377115 BCL2L13Q9BXK5 485 aa29.44■■■□□ 2.3
FOXA2-201ENST00000377115 POLR3AO14802 1390 aaPredicted RBP29.44■■■□□ 2.3
FOXA2-201ENST00000377115 L1TD1Q5T7N2 865 aaKnown RBP29.43■■■□□ 2.3
FOXA2-201ENST00000377115 ARXQ96QS3 562 aa29.43■■■□□ 2.3
FOXA2-201ENST00000377115 SPRYD3Q8NCJ5 442 aa29.4■■■□□ 2.3
FOXA2-201ENST00000377115 KIAA1210Q9ULL0 1709 aa29.39■■■□□ 2.3
FOXA2-201ENST00000377115 SHPRHQ149N8 1683 aa29.39■■■□□ 2.3
FOXA2-201ENST00000377115 TNNT2P45379 298 aaPredicted RBP29.39■■■□□ 2.29
FOXA2-201ENST00000377115 PLCH2O75038 1416 aa29.38■■■□□ 2.29
FOXA2-201ENST00000377115 ABCC1P33527 1531 aa29.38■■■□□ 2.29
FOXA2-201ENST00000377115 TCP11L2Q8N4U5 519 aa29.36■■■□□ 2.29
FOXA2-201ENST00000377115 EFCAB2Q5VUJ9 269 aa29.36■■■□□ 2.29
FOXA2-201ENST00000377115 ZMYM3Q14202 1370 aa29.35■■■□□ 2.29
FOXA2-201ENST00000377115 RUNDC1Q96C34 613 aa29.35■■■□□ 2.29
FOXA2-201ENST00000377115 ABCA6Q8N139 1617 aa29.35■■■□□ 2.29
FOXA2-201ENST00000377115 IQSEC2Q5JU85 1478 aa29.35■■■□□ 2.29
FOXA2-201ENST00000377115 ADGRF5Q8IZF2 1346 aa29.34■■■□□ 2.29
FOXA2-201ENST00000377115 AAMPQ13685 434 aa29.34■■■□□ 2.29
FOXA2-201ENST00000377115 SPAG9O60271 1321 aaKnown RBP29.33■■■□□ 2.29
FOXA2-201ENST00000377115 XRCC6P12956 609 aaKnown RBP eCLIP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms