RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TNNT2P45379 298 aaPredicted RBP22.66■■□□□ 1.22
LDLRAP1-201ENST00000374338 BACH2Q9BYV9 841 aa22.66■■□□□ 1.22
LDLRAP1-201ENST00000374338 VSIG10Q8N0Z9 540 aa22.64■■□□□ 1.22
LDLRAP1-201ENST00000374338 ABCC1P33527 1531 aa22.64■■□□□ 1.22
LDLRAP1-201ENST00000374338 CFAP65Q6ZU64 1925 aaKnown RBP22.64■■□□□ 1.21
LDLRAP1-201ENST00000374338 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.21
LDLRAP1-201ENST00000374338 FANCAO15360 1455 aa22.63■■□□□ 1.21
LDLRAP1-201ENST00000374338 COL17A1Q9UMD9 1497 aaPredicted RBP22.63■■□□□ 1.21
LDLRAP1-201ENST00000374338 RRP1P56182 461 aaKnown RBP22.63■■□□□ 1.21
LDLRAP1-201ENST00000374338 GPRASP1Q5JY77 1395 aa22.63■■□□□ 1.21
LDLRAP1-201ENST00000374338 MAST1Q9Y2H9 1570 aa22.62■■□□□ 1.21
LDLRAP1-201ENST00000374338 TMEM132EQ6IEE7 984 aa22.61■■□□□ 1.21
LDLRAP1-201ENST00000374338 ATP10AO60312 1499 aa22.61■■□□□ 1.21
LDLRAP1-201ENST00000374338 PLXNC1O60486 1568 aa22.6■■□□□ 1.21
LDLRAP1-201ENST00000374338 MAGI2Q86UL8 1455 aa22.6■■□□□ 1.21
LDLRAP1-201ENST00000374338 CLASP1Q7Z460 1538 aa22.6■■□□□ 1.21
LDLRAP1-201ENST00000374338 TRAK1Q9UPV9 953 aa22.59■■□□□ 1.21
LDLRAP1-201ENST00000374338 PPP2R1AP30153 589 aa22.58■■□□□ 1.21
LDLRAP1-201ENST00000374338 E9PCH4 1651 aa22.58■■□□□ 1.21
LDLRAP1-201ENST00000374338 C20orf194Q5TEA3 1177 aa22.58■■□□□ 1.21
LDLRAP1-201ENST00000374338 PRDM15P57071 1507 aaPredicted RBP22.58■■□□□ 1.2
LDLRAP1-201ENST00000374338 RAPGEF3O95398 923 aa22.57■■□□□ 1.2
LDLRAP1-201ENST00000374338 SAFB2Q14151 953 aaKnown RBP eCLIP22.57■■□□□ 1.2
LDLRAP1-201ENST00000374338 ADGRL1O94910 1474 aa22.57■■□□□ 1.2
LDLRAP1-201ENST00000374338 WDR7Q9Y4E6 1490 aa22.55■■□□□ 1.2
LDLRAP1-201ENST00000374338 WDR43Q15061 677 aaKnown RBP eCLIP22.55■■□□□ 1.2
LDLRAP1-201ENST00000374338 DDRGK1Q96HY6 314 aa22.55■■□□□ 1.2
LDLRAP1-201ENST00000374338 ASXL2Q76L83 1435 aa22.54■■□□□ 1.2
LDLRAP1-201ENST00000374338 ZFYVE16Q7Z3T8 1539 aa22.54■■□□□ 1.2
LDLRAP1-201ENST00000374338 NPM1P06748 294 aaKnown RBP eCLIP22.54■■□□□ 1.2
LDLRAP1-201ENST00000374338 MS4A1P11836 297 aa22.54■■□□□ 1.2
LDLRAP1-201ENST00000374338 AMER1Q5JTC6 1135 aaPredicted RBP22.54■■□□□ 1.2
LDLRAP1-201ENST00000374338 KANK1Q14678 1352 aa22.53■■□□□ 1.2
LDLRAP1-201ENST00000374338 PLEKHG5O94827 1062 aa22.52■■□□□ 1.2
LDLRAP1-201ENST00000374338 CLTCL1P53675 1640 aa22.51■■□□□ 1.19
LDLRAP1-201ENST00000374338 CRBNQ96SW2 442 aa22.51■■□□□ 1.19
LDLRAP1-201ENST00000374338 PODXL2Q9NZ53 605 aa22.51■■□□□ 1.19
LDLRAP1-201ENST00000374338 NEUROD2Q15784 382 aa22.5■■□□□ 1.19
LDLRAP1-201ENST00000374338 CARD14Q9BXL6 1004 aa22.49■■□□□ 1.19
LDLRAP1-201ENST00000374338 UHRF1BP1LA0JNW5 1464 aa22.49■■□□□ 1.19
LDLRAP1-201ENST00000374338 ATP7AQ04656 1500 aa22.48■■□□□ 1.19
LDLRAP1-201ENST00000374338 PLEKHH1Q9ULM0 1364 aa22.47■■□□□ 1.19
LDLRAP1-201ENST00000374338 SPINK5Q9NQ38 1064 aaPredicted RBP22.47■■□□□ 1.19
LDLRAP1-201ENST00000374338 APAF1O14727 1248 aa22.46■■□□□ 1.19
LDLRAP1-201ENST00000374338 SLC12A5Q9H2X9 1139 aa22.46■■□□□ 1.19
LDLRAP1-201ENST00000374338 RRAGDQ9NQL2 400 aaPredicted RBP22.46■■□□□ 1.19
LDLRAP1-201ENST00000374338 FRAT2O75474 233 aaPredicted RBP22.45■■□□□ 1.18
LDLRAP1-201ENST00000374338 MADDQ8WXG6 1647 aa22.44■■□□□ 1.18
LDLRAP1-201ENST00000374338 DMRT2Q9Y5R5 561 aa22.44■■□□□ 1.18
LDLRAP1-201ENST00000374338 RRP7AQ9Y3A4 280 aaKnown RBP22.43■■□□□ 1.18
LDLRAP1-201ENST00000374338 SCAF11Q99590 1463 aaKnown RBP22.43■■□□□ 1.18
LDLRAP1-201ENST00000374338 OSCARQ8IYS5 282 aa22.42■■□□□ 1.18
LDLRAP1-201ENST00000374338 STK26Q9P289 416 aa22.42■■□□□ 1.18
LDLRAP1-201ENST00000374338 RTEL1-TNFRSF6BF6WH68 1400 aa22.41■■□□□ 1.18
LDLRAP1-201ENST00000374338 EIF2AK4Q9P2K8 1649 aaKnown RBP22.41■■□□□ 1.18
LDLRAP1-201ENST00000374338 NOS1P29475 1434 aa22.41■■□□□ 1.18
LDLRAP1-201ENST00000374338 DAXXQ9UER7 740 aaPredicted RBP22.41■■□□□ 1.18
LDLRAP1-201ENST00000374338 TRPM2O94759 1503 aa22.41■■□□□ 1.18
LDLRAP1-201ENST00000374338 PTPRTO14522 1441 aa22.41■■□□□ 1.18
LDLRAP1-201ENST00000374338 SPHKAPQ2M3C7 1700 aa22.4■■□□□ 1.18
LDLRAP1-201ENST00000374338 HSP90AA2PQ14568 343 aaPredicted RBP22.39■■□□□ 1.18
LDLRAP1-201ENST00000374338 CDCA8Q53HL2 280 aa22.37■■□□□ 1.17
LDLRAP1-201ENST00000374338 PDE3BQ13370 1112 aa22.37■■□□□ 1.17
LDLRAP1-201ENST00000374338 ARXQ96QS3 562 aa22.37■■□□□ 1.17
LDLRAP1-201ENST00000374338 DUSP27Q5VZP5 1158 aa22.36■■□□□ 1.17
LDLRAP1-201ENST00000374338 BCAR3O75815 825 aa22.35■■□□□ 1.17
LDLRAP1-201ENST00000374338 CD109Q6YHK3 1445 aa22.35■■□□□ 1.17
LDLRAP1-201ENST00000374338 RRP9O43818 475 aaKnown RBP22.35■■□□□ 1.17
LDLRAP1-201ENST00000374338 BLMP54132 1417 aaPredicted RBP22.34■■□□□ 1.17
LDLRAP1-201ENST00000374338 CYB5RLQ6IPT4 315 aa22.34■■□□□ 1.17
LDLRAP1-201ENST00000374338 RNF17Q9BXT8 1623 aaKnown RBP22.33■■□□□ 1.17
LDLRAP1-201ENST00000374338 GOLGA2Q08379 1002 aa22.33■■□□□ 1.17
LDLRAP1-201ENST00000374338 CENPJQ9HC77 1338 aaPredicted RBP22.31■■□□□ 1.16
LDLRAP1-201ENST00000374338 RGS3P49796 1198 aa22.31■■□□□ 1.16
LDLRAP1-201ENST00000374338 CABP2Q9NPB3 220 aa22.31■■□□□ 1.16
LDLRAP1-201ENST00000374338 ABCA9Q8IUA7 1624 aa22.31■■□□□ 1.16
LDLRAP1-201ENST00000374338 INO80Q9ULG1 1556 aaPredicted RBP22.31■■□□□ 1.16
LDLRAP1-201ENST00000374338 CEP152O94986 1710 aa22.31■■□□□ 1.16
LDLRAP1-201ENST00000374338 EIF3AQ14152 1382 aaKnown RBP22.31■■□□□ 1.16
LDLRAP1-201ENST00000374338 NAP1L5Q96NT1 182 aaPredicted RBP22.3■■□□□ 1.16
LDLRAP1-201ENST00000374338 ERVK-7P63135 1459 aa22.3■■□□□ 1.16
LDLRAP1-201ENST00000374338 IQGAP1P46940 1657 aa22.3■■□□□ 1.16
LDLRAP1-201ENST00000374338 TET3O43151 1660 aa22.3■■□□□ 1.16
LDLRAP1-201ENST00000374338 MORC1Q86VD1 984 aa22.3■■□□□ 1.16
LDLRAP1-201ENST00000374338 MROH1Q8NDA8 1641 aa22.3■■□□□ 1.16
LDLRAP1-201ENST00000374338 LAMC1P11047 1609 aa22.29■■□□□ 1.16
LDLRAP1-201ENST00000374338 HSP90AA1P07900 732 aaKnown RBP22.29■■□□□ 1.16
LDLRAP1-201ENST00000374338 KIDINS220Q9ULH0 1771 aa22.29■■□□□ 1.16
LDLRAP1-201ENST00000374338 NPATQ14207 1427 aa22.29■■□□□ 1.16
LDLRAP1-201ENST00000374338 ASXL1Q8IXJ9 1541 aa22.28■■□□□ 1.16
LDLRAP1-201ENST00000374338 BCL2L13Q9BXK5 485 aa22.27■■□□□ 1.15
LDLRAP1-201ENST00000374338 ABCA6Q8N139 1617 aa22.27■■□□□ 1.15
LDLRAP1-201ENST00000374338 MROH2AA6NES4 1674 aa22.26■■□□□ 1.15
LDLRAP1-201ENST00000374338 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
LDLRAP1-201ENST00000374338 FBXO31Q5XUX0 539 aaPredicted RBP22.25■■□□□ 1.15
LDLRAP1-201ENST00000374338 DEPDC5O75140 1603 aa22.25■■□□□ 1.15
LDLRAP1-201ENST00000374338 POGKQ9P215 609 aa22.25■■□□□ 1.15
LDLRAP1-201ENST00000374338 IDI1Q13907 227 aa22.24■■□□□ 1.15
LDLRAP1-201ENST00000374338 MLECQ14165 292 aa22.24■■□□□ 1.15
LDLRAP1-201ENST00000374338 SLFN5Q08AF3 891 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms