RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 PLXNC1O60486 1568 aa17.31■□□□□ 0.36
SNX12-202ENST00000374274 EFCAB2Q5VUJ9 269 aa17.3■□□□□ 0.36
SNX12-202ENST00000374274 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
SNX12-202ENST00000374274 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
SNX12-202ENST00000374274 POGKQ9P215 609 aa17.3■□□□□ 0.36
SNX12-202ENST00000374274 USP19O94966 1318 aa17.3■□□□□ 0.36
SNX12-202ENST00000374274 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
SNX12-202ENST00000374274 WDR7Q9Y4E6 1490 aa17.29■□□□□ 0.36
SNX12-202ENST00000374274 OSCARQ8IYS5 282 aa17.29■□□□□ 0.36
SNX12-202ENST00000374274 MAPK8IP3Q9UPT6 1336 aa17.28■□□□□ 0.36
SNX12-202ENST00000374274 ABCC1P33527 1531 aa17.28■□□□□ 0.36
SNX12-202ENST00000374274 ARAP3Q8WWN8 1544 aa17.28■□□□□ 0.36
SNX12-202ENST00000374274 PRDM15P57071 1507 aaPredicted RBP17.28■□□□□ 0.36
SNX12-202ENST00000374274 PRAG1Q86YV5 1406 aa17.27■□□□□ 0.36
SNX12-202ENST00000374274 FSD2A1L4K1 749 aa17.26■□□□□ 0.35
SNX12-202ENST00000374274 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
SNX12-202ENST00000374274 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
SNX12-202ENST00000374274 ANTXR1Q9H6X2 564 aa17.26■□□□□ 0.35
SNX12-202ENST00000374274 NLRP1Q9C000 1473 aa17.25■□□□□ 0.35
SNX12-202ENST00000374274 UNC13BO14795 1591 aa17.24■□□□□ 0.35
SNX12-202ENST00000374274 FAM135AQ9P2D6 1515 aa17.24■□□□□ 0.35
SNX12-202ENST00000374274 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
SNX12-202ENST00000374274 EIF2AK4Q9P2K8 1649 aaKnown RBP17.24■□□□□ 0.35
SNX12-202ENST00000374274 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
SNX12-202ENST00000374274 PLEKHH1Q9ULM0 1364 aa17.23■□□□□ 0.35
SNX12-202ENST00000374274 GOLGA6L3A6NEY3 463 aa17.23■□□□□ 0.35
SNX12-202ENST00000374274 HSP90AA1P07900 732 aaKnown RBP17.23■□□□□ 0.35
SNX12-202ENST00000374274 RGS3P49796 1198 aa17.23■□□□□ 0.35
SNX12-202ENST00000374274 ISY1Q9ULR0 285 aaKnown RBP17.23■□□□□ 0.35
SNX12-202ENST00000374274 ABCA9Q8IUA7 1624 aa17.22■□□□□ 0.35
SNX12-202ENST00000374274 HSP90AA2PQ14568 343 aaPredicted RBP17.22■□□□□ 0.35
SNX12-202ENST00000374274 TRMT2AQ8IZ69 625 aaKnown RBP17.22■□□□□ 0.35
SNX12-202ENST00000374274 TRAPPC8Q9Y2L5 1435 aa17.21■□□□□ 0.35
SNX12-202ENST00000374274 NKTRP30414 1462 aaKnown RBP17.21■□□□□ 0.35
SNX12-202ENST00000374274 CGNL1Q0VF96 1302 aa17.2■□□□□ 0.34
SNX12-202ENST00000374274 ASXL2Q76L83 1435 aa17.2■□□□□ 0.34
SNX12-202ENST00000374274 ERBINQ96RT1 1412 aa17.2■□□□□ 0.34
SNX12-202ENST00000374274 XRCC6P12956 609 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNX12-202ENST00000374274 SLFN5Q08AF3 891 aa17.2■□□□□ 0.34
SNX12-202ENST00000374274 AAMPQ13685 434 aa17.2■□□□□ 0.34
SNX12-202ENST00000374274 NAP1L5Q96NT1 182 aaPredicted RBP17.2■□□□□ 0.34
SNX12-202ENST00000374274 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
SNX12-202ENST00000374274 ADAMTS8Q9UP79 889 aa17.19■□□□□ 0.34
SNX12-202ENST00000374274 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
SNX12-202ENST00000374274 ZMYND15Q9H091 742 aa17.18■□□□□ 0.34
SNX12-202ENST00000374274 IQGAP3Q86VI3 1631 aa17.18■□□□□ 0.34
SNX12-202ENST00000374274 PDE3AQ14432 1141 aa17.17■□□□□ 0.34
SNX12-202ENST00000374274 CC2D1BQ5T0F9 858 aaKnown RBP17.17■□□□□ 0.34
SNX12-202ENST00000374274 TESK2Q96S53 571 aa17.17■□□□□ 0.34
SNX12-202ENST00000374274 PIK3C2GO75747 1445 aa17.17■□□□□ 0.34
SNX12-202ENST00000374274 FANCAO15360 1455 aa17.17■□□□□ 0.34
SNX12-202ENST00000374274 MRE11P49959 708 aa17.17■□□□□ 0.34
SNX12-202ENST00000374274 UPF2Q9HAU5 1272 aaKnown RBP17.17■□□□□ 0.34
SNX12-202ENST00000374274 DISP3Q9P2K9 1392 aa17.16■□□□□ 0.34
SNX12-202ENST00000374274 WDR43Q15061 677 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNX12-202ENST00000374274 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
SNX12-202ENST00000374274 PANK3Q9H999 370 aa17.16■□□□□ 0.34
SNX12-202ENST00000374274 KDM2AQ9Y2K7 1162 aa17.16■□□□□ 0.34
SNX12-202ENST00000374274 RTEL1-TNFRSF6BF6WH68 1400 aa17.16■□□□□ 0.34
SNX12-202ENST00000374274 MAGI2Q86UL8 1455 aa17.16■□□□□ 0.34
SNX12-202ENST00000374274 SPAG9O60271 1321 aaKnown RBP17.15■□□□□ 0.34
SNX12-202ENST00000374274 TMF1P82094 1093 aa17.15■□□□□ 0.34
SNX12-202ENST00000374274 NPM1P06748 294 aaKnown RBP eCLIP17.14■□□□□ 0.33
SNX12-202ENST00000374274 TBC1D32Q96NH3 1257 aa17.14■□□□□ 0.33
SNX12-202ENST00000374274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.14■□□□□ 0.33
SNX12-202ENST00000374274 ZFYVE16Q7Z3T8 1539 aa17.14■□□□□ 0.33
SNX12-202ENST00000374274 RNF17Q9BXT8 1623 aaKnown RBP17.13■□□□□ 0.33
SNX12-202ENST00000374274 MCM4P33991 863 aa17.13■□□□□ 0.33
SNX12-202ENST00000374274 SLKQ9H2G2 1235 aaPredicted RBP17.13■□□□□ 0.33
SNX12-202ENST00000374274 AFAP1Q8N556 730 aa17.13■□□□□ 0.33
SNX12-202ENST00000374274 CENPJQ9HC77 1338 aaPredicted RBP17.12■□□□□ 0.33
SNX12-202ENST00000374274 NPC1L1Q9UHC9 1359 aa17.12■□□□□ 0.33
SNX12-202ENST00000374274 SYNMO15061 1565 aa17.11■□□□□ 0.33
SNX12-202ENST00000374274 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
SNX12-202ENST00000374274 ADGRL1O94910 1474 aa17.1■□□□□ 0.33
SNX12-202ENST00000374274 E9PSI1 815 aa17.1■□□□□ 0.33
SNX12-202ENST00000374274 IGHDP01880 384 aa17.1■□□□□ 0.33
SNX12-202ENST00000374274 TPM2P07951 284 aa17.1■□□□□ 0.33
SNX12-202ENST00000374274 CLUAP1Q96AJ1 413 aa17.1■□□□□ 0.33
SNX12-202ENST00000374274 INO80Q9ULG1 1556 aaPredicted RBP17.1■□□□□ 0.33
SNX12-202ENST00000374274 A2MP01023 1474 aa17.1■□□□□ 0.33
SNX12-202ENST00000374274 SEC24BO95487 1268 aa17.1■□□□□ 0.33
SNX12-202ENST00000374274 TBC1D2Q9BYX2 928 aa17.1■□□□□ 0.33
SNX12-202ENST00000374274 ATP7AQ04656 1500 aa17.09■□□□□ 0.33
SNX12-202ENST00000374274 PMFBP1Q8TBY8 1022 aa17.08■□□□□ 0.33
SNX12-202ENST00000374274 CHMP5Q9NZZ3 219 aa17.08■□□□□ 0.33
SNX12-202ENST00000374274 PLA2R1Q13018 1463 aa17.08■□□□□ 0.33
SNX12-202ENST00000374274 SCAPERQ9BY12 1400 aa17.08■□□□□ 0.32
SNX12-202ENST00000374274 DDX11L8A8MPP1 907 aa17.07■□□□□ 0.32
SNX12-202ENST00000374274 ESPNB1AK53 854 aa17.07■□□□□ 0.32
SNX12-202ENST00000374274 ASXL1Q8IXJ9 1541 aa17.07■□□□□ 0.32
SNX12-202ENST00000374274 MYH16Q9H6N6 1097 aa17.07■□□□□ 0.32
SNX12-202ENST00000374274 ATP10AO60312 1499 aa17.06■□□□□ 0.32
SNX12-202ENST00000374274 TRAK2O60296 914 aa17.05■□□□□ 0.32
SNX12-202ENST00000374274 NBPF1Q3BBV0 1214 aa17.05■□□□□ 0.32
SNX12-202ENST00000374274 PANK2Q9BZ23 570 aa17.05■□□□□ 0.32
SNX12-202ENST00000374274 KNSTRNQ9Y448 316 aa17.05■□□□□ 0.32
SNX12-202ENST00000374274 DEPDC5O75140 1603 aa17.05■□□□□ 0.32
SNX12-202ENST00000374274 GRPEL1Q9HAV7 217 aa17.04■□□□□ 0.32
SNX12-202ENST00000374274 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms