RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 ROCK1Q13464 1354 aa22.1■■□□□ 1.13
COL16A1-203ENST00000373672 APAF1O14727 1248 aa22.1■■□□□ 1.13
COL16A1-203ENST00000373672 TPM1P09493 284 aa22.1■■□□□ 1.13
COL16A1-203ENST00000373672 API5Q9BZZ5 524 aaKnown RBP22.1■■□□□ 1.13
COL16A1-203ENST00000373672 DIAPH1O60610 1272 aaKnown RBP22.09■■□□□ 1.13
COL16A1-203ENST00000373672 RSPH6AQ9H0K4 717 aa22.09■■□□□ 1.13
COL16A1-203ENST00000373672 ZKSCAN1P17029 563 aaPredicted RBP22.08■■□□□ 1.13
COL16A1-203ENST00000373672 CPLX2Q6PUV4 134 aaKnown RBP22.08■■□□□ 1.13
COL16A1-203ENST00000373672 TTC5Q8N0Z6 440 aa22.08■■□□□ 1.13
COL16A1-203ENST00000373672 MCTP1Q6DN14 999 aa22.07■■□□□ 1.12
COL16A1-203ENST00000373672 DZIP1LQ8IYY4 767 aaKnown RBP22.07■■□□□ 1.12
COL16A1-203ENST00000373672 C9orf78Q9NZ63 289 aaPredicted RBP22.07■■□□□ 1.12
COL16A1-203ENST00000373672 MINK1Q8N4C8 1332 aaPredicted RBP22.07■■□□□ 1.12
COL16A1-203ENST00000373672 FOXD4L6Q3SYB3 417 aaPredicted RBP22.06■■□□□ 1.12
COL16A1-203ENST00000373672 FOXD4L3Q6VB84 417 aaPredicted RBP22.06■■□□□ 1.12
COL16A1-203ENST00000373672 HSP90AA2PQ14568 343 aaPredicted RBP22.05■■□□□ 1.12
COL16A1-203ENST00000373672 ANO2Q9NQ90 1003 aa22.05■■□□□ 1.12
COL16A1-203ENST00000373672 PRM3Q9NNZ6 103 aa22.05■■□□□ 1.12
COL16A1-203ENST00000373672 IFIT2P09913 472 aaKnown RBP22.05■■□□□ 1.12
COL16A1-203ENST00000373672 TRIM29Q14134 588 aa22.05■■□□□ 1.12
COL16A1-203ENST00000373672 EIF2S2P20042 333 aaKnown RBP22.04■■□□□ 1.12
COL16A1-203ENST00000373672 RIPK4P57078 832 aa22.04■■□□□ 1.12
COL16A1-203ENST00000373672 AMOTL1Q8IY63 956 aa22.03■■□□□ 1.12
COL16A1-203ENST00000373672 FANCIQ9NVI1 1328 aa22.03■■□□□ 1.12
COL16A1-203ENST00000373672 PTPRGP23470 1445 aa22.03■■□□□ 1.12
COL16A1-203ENST00000373672 CCDC70Q6NSX1 233 aa22.02■■□□□ 1.12
COL16A1-203ENST00000373672 RUNDC1Q96C34 613 aa22.02■■□□□ 1.12
COL16A1-203ENST00000373672 CHMP5Q9NZZ3 219 aa22.01■■□□□ 1.11
COL16A1-203ENST00000373672 EVA1CP58658 441 aa22.01■■□□□ 1.11
COL16A1-203ENST00000373672 NOL10Q9BSC4 688 aaKnown RBP22.01■■□□□ 1.11
COL16A1-203ENST00000373672 CCAR2Q8N163 923 aaKnown RBP22.01■■□□□ 1.11
COL16A1-203ENST00000373672 DDX58O95786 925 aaKnown RBP22.01■■□□□ 1.11
COL16A1-203ENST00000373672 RNF20Q5VTR2 975 aa22.01■■□□□ 1.11
COL16A1-203ENST00000373672 GPS2Q13227 327 aa22■■□□□ 1.11
COL16A1-203ENST00000373672 INTS3Q68E01 1043 aaKnown RBP21.98■■□□□ 1.11
COL16A1-203ENST00000373672 CPLX1O14810 134 aa21.98■■□□□ 1.11
COL16A1-203ENST00000373672 CCDC47Q96A33 483 aaKnown RBP21.98■■□□□ 1.11
COL16A1-203ENST00000373672 MYOM3Q5VTT5 1437 aa21.98■■□□□ 1.11
COL16A1-203ENST00000373672 G3BP1Q13283 466 aaKnown RBP eCLIP21.97■■□□□ 1.11
COL16A1-203ENST00000373672 HOOK1Q9UJC3 728 aaKnown RBP21.97■■□□□ 1.11
COL16A1-203ENST00000373672 SETQ01105 290 aaPredicted RBP21.96■■□□□ 1.11
COL16A1-203ENST00000373672 ANKRD20A12PQ8NF67 263 aa21.96■■□□□ 1.11
COL16A1-203ENST00000373672 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
COL16A1-203ENST00000373672 GNAI1P63096 354 aa21.96■■□□□ 1.11
COL16A1-203ENST00000373672 FKBP5Q13451 457 aaPredicted RBP21.96■■□□□ 1.11
COL16A1-203ENST00000373672 AAMPQ13685 434 aa21.95■■□□□ 1.11
COL16A1-203ENST00000373672 BICD2Q8TD16 824 aa21.95■■□□□ 1.1
COL16A1-203ENST00000373672 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
COL16A1-203ENST00000373672 HSP90AB4PQ58FF6 505 aa21.95■■□□□ 1.1
COL16A1-203ENST00000373672 TRDNQ13061 729 aa21.95■■□□□ 1.1
COL16A1-203ENST00000373672 APPP05067 770 aa21.94■■□□□ 1.1
COL16A1-203ENST00000373672 NECTIN2Q92692 538 aa21.94■■□□□ 1.1
COL16A1-203ENST00000373672 RUSC2Q8N2Y8 1516 aa21.94■■□□□ 1.1
COL16A1-203ENST00000373672 IPO7O95373 1038 aaKnown RBP21.94■■□□□ 1.1
COL16A1-203ENST00000373672 ZNF592Q92610 1267 aa21.94■■□□□ 1.1
COL16A1-203ENST00000373672 NUCB2P80303 420 aa21.94■■□□□ 1.1
COL16A1-203ENST00000373672 CUX1P39880 1505 aa21.94■■□□□ 1.1
COL16A1-203ENST00000373672 CCDC7Q96M83 1385 aa21.93■■□□□ 1.1
COL16A1-203ENST00000373672 PCMTD1Q96MG8 357 aaPredicted RBP21.93■■□□□ 1.1
COL16A1-203ENST00000373672 TRIM34Q9BYJ4 488 aa21.93■■□□□ 1.1
COL16A1-203ENST00000373672 STAC3Q96MF2 364 aa21.92■■□□□ 1.1
COL16A1-203ENST00000373672 SMC3Q9UQE7 1217 aa21.92■■□□□ 1.1
COL16A1-203ENST00000373672 ERC2O15083 957 aa21.91■■□□□ 1.1
COL16A1-203ENST00000373672 TCEAL9Q9UHQ7 104 aa21.91■■□□□ 1.1
COL16A1-203ENST00000373672 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.91■■□□□ 1.1
COL16A1-203ENST00000373672 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
COL16A1-203ENST00000373672 CNTLNQ9NXG0 1405 aa21.91■■□□□ 1.1
COL16A1-203ENST00000373672 TSPYL4Q9UJ04 414 aa21.9■■□□□ 1.1
COL16A1-203ENST00000373672 NFXL1Q6ZNB6 911 aa21.89■■□□□ 1.1
COL16A1-203ENST00000373672 VPS37CA5D8V6 355 aaPredicted RBP21.89■■□□□ 1.09
COL16A1-203ENST00000373672 MIA2Q96PC5 1412 aa21.89■■□□□ 1.09
COL16A1-203ENST00000373672 KIF7Q2M1P5 1343 aa21.89■■□□□ 1.09
COL16A1-203ENST00000373672 ERICH2A1L162 156 aa21.89■■□□□ 1.09
COL16A1-203ENST00000373672 PSME1Q06323 249 aa21.88■■□□□ 1.09
COL16A1-203ENST00000373672 VPS37DQ86XT2 251 aa21.88■■□□□ 1.09
COL16A1-203ENST00000373672 SASS6Q6UVJ0 657 aa21.88■■□□□ 1.09
COL16A1-203ENST00000373672 C22orf23Q9BZE7 217 aa21.88■■□□□ 1.09
COL16A1-203ENST00000373672 FGD6Q6ZV73 1430 aa21.88■■□□□ 1.09
COL16A1-203ENST00000373672 RAD21O60216 631 aa21.87■■□□□ 1.09
COL16A1-203ENST00000373672 CTDP1Q9Y5B0 961 aaPredicted RBP21.87■■□□□ 1.09
COL16A1-203ENST00000373672 HOMER1Q86YM7 354 aa21.86■■□□□ 1.09
COL16A1-203ENST00000373672 LNPKQ9C0E8 428 aa21.86■■□□□ 1.09
COL16A1-203ENST00000373672 DHX16O60231 1041 aaKnown RBP21.85■■□□□ 1.09
COL16A1-203ENST00000373672 CDC45O75419 566 aa21.85■■□□□ 1.09
COL16A1-203ENST00000373672 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.85■■□□□ 1.09
COL16A1-203ENST00000373672 CCDC73Q6ZRK6 1079 aa21.84■■□□□ 1.09
COL16A1-203ENST00000373672 SAFBQ15424 915 aaKnown RBP eCLIP21.83■■□□□ 1.09
COL16A1-203ENST00000373672 MSH5O43196 834 aa21.83■■□□□ 1.08
COL16A1-203ENST00000373672 ZNF771Q7L3S4 317 aaPredicted RBP21.83■■□□□ 1.08
COL16A1-203ENST00000373672 NINLQ9Y2I6 1382 aa21.82■■□□□ 1.08
COL16A1-203ENST00000373672 HMOX1P09601 288 aa21.82■■□□□ 1.08
COL16A1-203ENST00000373672 BRD4O60885 1362 aaPredicted RBP21.82■■□□□ 1.08
COL16A1-203ENST00000373672 TEX35Q5T0J7 233 aa21.81■■□□□ 1.08
COL16A1-203ENST00000373672 PANK1Q8TE04 598 aa21.8■■□□□ 1.08
COL16A1-203ENST00000373672 ANO8Q9HCE9 1232 aaPredicted RBP21.8■■□□□ 1.08
COL16A1-203ENST00000373672 RIC3Q7Z5B4 369 aa21.8■■□□□ 1.08
COL16A1-203ENST00000373672 GAPVD1Q14C86 1478 aa21.79■■□□□ 1.08
COL16A1-203ENST00000373672 SYTL4Q96C24 671 aaPredicted RBP21.79■■□□□ 1.08
COL16A1-203ENST00000373672 RALYLQ86SE5 291 aaKnown RBP21.79■■□□□ 1.08
COL16A1-203ENST00000373672 UBTFL1P0CB47 393 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms