RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 NWD1Q149M9 1564 aa23.93■■□□□ 1.42
HDAC8-208ENST00000373583 DIP2AQ14689 1571 aa23.91■■□□□ 1.42
HDAC8-208ENST00000373583 ACIN1Q9UKV3 1341 aaKnown RBP23.91■■□□□ 1.42
HDAC8-208ENST00000373583 XIRP1Q702N8 1843 aaKnown RBP23.91■■□□□ 1.42
HDAC8-208ENST00000373583 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
HDAC8-208ENST00000373583 HDGFP51858 240 aaKnown RBP23.9■■□□□ 1.42
HDAC8-208ENST00000373583 SETD5Q9C0A6 1442 aa23.9■■□□□ 1.42
HDAC8-208ENST00000373583 SLC4A1APQ9BWU0 796 aaKnown RBP23.89■■□□□ 1.41
HDAC8-208ENST00000373583 CHGAP10645 457 aaKnown RBP23.88■■□□□ 1.41
HDAC8-208ENST00000373583 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.88■■□□□ 1.41
HDAC8-208ENST00000373583 CHD2O14647 1828 aaKnown RBP23.88■■□□□ 1.41
HDAC8-208ENST00000373583 NEXMIFQ5QGS0 1516 aa23.85■■□□□ 1.41
HDAC8-208ENST00000373583 NKTRP30414 1462 aaKnown RBP23.85■■□□□ 1.41
HDAC8-208ENST00000373583 NRXN3Q9Y4C0 1643 aa23.84■■□□□ 1.41
HDAC8-208ENST00000373583 SETBP1Q9Y6X0 1596 aa23.84■■□□□ 1.41
HDAC8-208ENST00000373583 PPP1R15AO75807 674 aaPredicted RBP23.84■■□□□ 1.41
HDAC8-208ENST00000373583 ALKQ9UM73 1620 aa23.82■■□□□ 1.4
HDAC8-208ENST00000373583 ADAMTS13Q76LX8 1427 aa23.82■■□□□ 1.4
HDAC8-208ENST00000373583 RAB3GAP2Q9H2M9 1393 aa23.81■■□□□ 1.4
HDAC8-208ENST00000373583 SLC26A8Q96RN1 970 aa23.81■■□□□ 1.4
HDAC8-208ENST00000373583 PPLO60437 1756 aa23.8■■□□□ 1.4
HDAC8-208ENST00000373583 UBAP1LF5GYI3 381 aa23.79■■□□□ 1.4
HDAC8-208ENST00000373583 KCNA6P17658 529 aa23.79■■□□□ 1.4
HDAC8-208ENST00000373583 MPHOSPH9Q99550 1183 aa23.78■■□□□ 1.4
HDAC8-208ENST00000373583 TBX22Q9Y458 520 aa23.77■■□□□ 1.4
HDAC8-208ENST00000373583 PIK3R4Q99570 1358 aa23.77■■□□□ 1.4
HDAC8-208ENST00000373583 BCANQ96GW7 911 aa23.76■■□□□ 1.39
HDAC8-208ENST00000373583 IFT172Q9UG01 1749 aa23.76■■□□□ 1.39
HDAC8-208ENST00000373583 CCDC144AA2RUR9 1427 aa23.75■■□□□ 1.39
HDAC8-208ENST00000373583 TOM1O60784 492 aa23.74■■□□□ 1.39
HDAC8-208ENST00000373583 ZNF326Q5BKZ1 582 aaKnown RBP23.74■■□□□ 1.39
HDAC8-208ENST00000373583 NUTM2DQ5VT03 806 aaPredicted RBP23.74■■□□□ 1.39
HDAC8-208ENST00000373583 SETD1AO15047 1707 aaKnown RBP23.73■■□□□ 1.39
HDAC8-208ENST00000373583 XRN1Q8IZH2 1706 aaKnown RBP23.73■■□□□ 1.39
HDAC8-208ENST00000373583 FOXD1Q16676 465 aa23.72■■□□□ 1.39
HDAC8-208ENST00000373583 TMEM94Q12767 1356 aa23.7■■□□□ 1.38
HDAC8-208ENST00000373583 SPATA31E1Q6ZUB1 1445 aa23.69■■□□□ 1.38
HDAC8-208ENST00000373583 RPGRIP1LQ68CZ1 1315 aa23.69■■□□□ 1.38
HDAC8-208ENST00000373583 HRCP23327 699 aa23.69■■□□□ 1.38
HDAC8-208ENST00000373583 SENP3Q9H4L4 574 aaPredicted RBP23.68■■□□□ 1.38
HDAC8-208ENST00000373583 NCOA3Q9Y6Q9 1424 aa23.66■■□□□ 1.38
HDAC8-208ENST00000373583 PTPRUQ92729 1446 aa23.65■■□□□ 1.38
HDAC8-208ENST00000373583 PROSER2Q86WR7 435 aaPredicted RBP23.64■■□□□ 1.37
HDAC8-208ENST00000373583 VGFO15240 615 aaPredicted RBP23.63■■□□□ 1.37
HDAC8-208ENST00000373583 PIP4K2BP78356 416 aa23.61■■□□□ 1.37
HDAC8-208ENST00000373583 METP08581 1390 aa23.6■■□□□ 1.37
HDAC8-208ENST00000373583 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
HDAC8-208ENST00000373583 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.59■■□□□ 1.37
HDAC8-208ENST00000373583 MSH6P52701 1360 aa23.59■■□□□ 1.37
HDAC8-208ENST00000373583 ANKRD30BQ9BXX2 1392 aa23.59■■□□□ 1.37
HDAC8-208ENST00000373583 PRAG1Q86YV5 1406 aa23.59■■□□□ 1.37
HDAC8-208ENST00000373583 ROBO1Q9Y6N7 1651 aa23.57■■□□□ 1.36
HDAC8-208ENST00000373583 AMOTL2Q9Y2J4 779 aa23.56■■□□□ 1.36
HDAC8-208ENST00000373583 RBM33Q96EV2 1170 aaKnown RBP23.55■■□□□ 1.36
HDAC8-208ENST00000373583 FAM135BQ49AJ0 1406 aa23.54■■□□□ 1.36
HDAC8-208ENST00000373583 LAMC1P11047 1609 aa23.54■■□□□ 1.36
HDAC8-208ENST00000373583 MYOM2P54296 1465 aa23.54■■□□□ 1.36
HDAC8-208ENST00000373583 NALCNQ8IZF0 1738 aa23.53■■□□□ 1.36
HDAC8-208ENST00000373583 PTCH1Q13635 1447 aa23.53■■□□□ 1.36
HDAC8-208ENST00000373583 PIK3C2GO75747 1445 aa23.52■■□□□ 1.36
HDAC8-208ENST00000373583 DCCP43146 1447 aa23.52■■□□□ 1.36
HDAC8-208ENST00000373583 HSPA1LP34931 641 aa23.52■■□□□ 1.36
HDAC8-208ENST00000373583 NRXN1Q9ULB1 1477 aa23.51■■□□□ 1.35
HDAC8-208ENST00000373583 KNDC1Q76NI1 1749 aa23.51■■□□□ 1.35
HDAC8-208ENST00000373583 RGL3Q3MIN7 710 aa23.51■■□□□ 1.35
HDAC8-208ENST00000373583 ADGRF5Q8IZF2 1346 aa23.49■■□□□ 1.35
HDAC8-208ENST00000373583 ASXL1Q8IXJ9 1541 aa23.48■■□□□ 1.35
HDAC8-208ENST00000373583 ADGRL3Q9HAR2 1447 aa23.47■■□□□ 1.35
HDAC8-208ENST00000373583 C19orf44Q9H6X5 657 aa23.46■■□□□ 1.35
HDAC8-208ENST00000373583 C14orf37Q86TY3 774 aa23.45■■□□□ 1.34
HDAC8-208ENST00000373583 TECPR2O15040 1411 aa23.43■■□□□ 1.34
HDAC8-208ENST00000373583 CADPS2Q86UW7 1296 aa23.43■■□□□ 1.34
HDAC8-208ENST00000373583 PHLPP1O60346 1717 aa23.42■■□□□ 1.34
HDAC8-208ENST00000373583 SLAIN2Q9P270 581 aa23.42■■□□□ 1.34
HDAC8-208ENST00000373583 ROBO2Q9HCK4 1378 aa23.41■■□□□ 1.34
HDAC8-208ENST00000373583 MED1Q15648 1581 aaPredicted RBP23.41■■□□□ 1.34
HDAC8-208ENST00000373583 ATF3P18847 181 aa23.4■■□□□ 1.34
HDAC8-208ENST00000373583 AHDC1Q5TGY3 1603 aaPredicted RBP23.39■■□□□ 1.33
HDAC8-208ENST00000373583 MST1RQ04912 1400 aa23.38■■□□□ 1.33
HDAC8-208ENST00000373583 LRPPRCP42704 1394 aaKnown RBP23.38■■□□□ 1.33
HDAC8-208ENST00000373583 COL16A1Q07092 1604 aaPredicted RBP23.37■■□□□ 1.33
HDAC8-208ENST00000373583 CDC42BPGQ6DT37 1551 aa23.36■■□□□ 1.33
HDAC8-208ENST00000373583 NHSL1Q5SYE7 1610 aa23.36■■□□□ 1.33
HDAC8-208ENST00000373583 ABCC11Q96J66 1382 aa23.35■■□□□ 1.33
HDAC8-208ENST00000373583 YTHDC2Q9H6S0 1430 aaKnown RBP23.34■■□□□ 1.33
HDAC8-208ENST00000373583 STAC3Q96MF2 364 aa23.34■■□□□ 1.33
HDAC8-208ENST00000373583 C14orf93Q9H972 538 aaKnown RBP23.34■■□□□ 1.33
HDAC8-208ENST00000373583 DISP3Q9P2K9 1392 aa23.34■■□□□ 1.33
HDAC8-208ENST00000373583 ADGRB1O14514 1584 aa23.33■■□□□ 1.33
HDAC8-208ENST00000373583 DHX57Q6P158 1386 aaKnown RBP23.31■■□□□ 1.32
HDAC8-208ENST00000373583 KIAA1210Q9ULL0 1709 aa23.3■■□□□ 1.32
HDAC8-208ENST00000373583 DLC1Q96QB1 1528 aa23.3■■□□□ 1.32
HDAC8-208ENST00000373583 SHPRHQ149N8 1683 aa23.28■■□□□ 1.32
HDAC8-208ENST00000373583 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
HDAC8-208ENST00000373583 CFAP70Q5T0N1 1121 aa23.27■■□□□ 1.32
HDAC8-208ENST00000373583 BRINP3Q76B58 766 aa23.27■■□□□ 1.32
HDAC8-208ENST00000373583 DCAF11Q8TEB1 546 aa23.27■■□□□ 1.32
HDAC8-208ENST00000373583 C1orf167Q5SNV9 1468 aa23.27■■□□□ 1.32
HDAC8-208ENST00000373583 FMN2Q9NZ56 1722 aa23.27■■□□□ 1.32
HDAC8-208ENST00000373583 TRIM26Q12899 539 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms