RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 C1orf141Q5JVX7 400 aa19.01■□□□□ 0.63
CHST3-201ENST00000373115 CPLX1O14810 134 aa19.01■□□□□ 0.63
CHST3-201ENST00000373115 TRIM34Q9BYJ4 488 aa19■□□□□ 0.63
CHST3-201ENST00000373115 C9orf78Q9NZ63 289 aaPredicted RBP19■□□□□ 0.63
CHST3-201ENST00000373115 PHLDB1Q86UU1 1377 aa19■□□□□ 0.63
CHST3-201ENST00000373115 PDZRN4Q6ZMN7 1036 aaPredicted RBP19■□□□□ 0.63
CHST3-201ENST00000373115 NFXL1Q6ZNB6 911 aa19■□□□□ 0.63
CHST3-201ENST00000373115 FAM43AQ8N2R8 423 aa19■□□□□ 0.63
CHST3-201ENST00000373115 RUFY2Q8WXA3 655 aa18.99■□□□□ 0.63
CHST3-201ENST00000373115 CCDC47Q96A33 483 aaKnown RBP18.99■□□□□ 0.63
CHST3-201ENST00000373115 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
CHST3-201ENST00000373115 AK7Q96M32 723 aa18.99■□□□□ 0.63
CHST3-201ENST00000373115 ZKSCAN1P17029 563 aaPredicted RBP18.99■□□□□ 0.63
CHST3-201ENST00000373115 E9PSI1 815 aa18.98■□□□□ 0.63
CHST3-201ENST00000373115 CPLX2Q6PUV4 134 aaKnown RBP18.98■□□□□ 0.63
CHST3-201ENST00000373115 CTDP1Q9Y5B0 961 aaPredicted RBP18.98■□□□□ 0.63
CHST3-201ENST00000373115 KDM4AO75164 1064 aa18.98■□□□□ 0.63
CHST3-201ENST00000373115 IFIT2P09913 472 aaKnown RBP18.98■□□□□ 0.63
CHST3-201ENST00000373115 CHMP4CQ96CF2 233 aa18.98■□□□□ 0.63
CHST3-201ENST00000373115 R3HCC1Q9Y3T6 440 aaKnown RBP18.98■□□□□ 0.63
CHST3-201ENST00000373115 REC8O95072 547 aa18.98■□□□□ 0.63
CHST3-201ENST00000373115 MNS1Q8NEH6 495 aa18.98■□□□□ 0.63
CHST3-201ENST00000373115 HOOK1Q9UJC3 728 aaKnown RBP18.98■□□□□ 0.63
CHST3-201ENST00000373115 AMOTL1Q8IY63 956 aa18.97■□□□□ 0.63
CHST3-201ENST00000373115 NOL10Q9BSC4 688 aaKnown RBP18.97■□□□□ 0.63
CHST3-201ENST00000373115 SKIDA1Q1XH10 827 aa18.97■□□□□ 0.63
CHST3-201ENST00000373115 CHMP5Q9NZZ3 219 aa18.97■□□□□ 0.63
CHST3-201ENST00000373115 ST20-MTHFSA0A0A6YYL1 179 aa18.96■□□□□ 0.63
CHST3-201ENST00000373115 MSH5O43196 834 aa18.96■□□□□ 0.63
CHST3-201ENST00000373115 SMC3Q9UQE7 1217 aa18.96■□□□□ 0.63
CHST3-201ENST00000373115 EID1Q9Y6B2 187 aa18.96■□□□□ 0.63
CHST3-201ENST00000373115 TTLL5Q6EMB2 1281 aa18.96■□□□□ 0.63
CHST3-201ENST00000373115 FMN1Q68DA7 1419 aa18.95■□□□□ 0.62
CHST3-201ENST00000373115 SAMD1Q6SPF0 538 aaPredicted RBP18.95■□□□□ 0.62
CHST3-201ENST00000373115 PDILTQ8N807 584 aa18.95■□□□□ 0.62
CHST3-201ENST00000373115 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
CHST3-201ENST00000373115 ABCC8Q09428 1581 aa18.94■□□□□ 0.62
CHST3-201ENST00000373115 NOM1Q5C9Z4 860 aaKnown RBP18.94■□□□□ 0.62
CHST3-201ENST00000373115 MAP7D2Q96T17 732 aa18.93■□□□□ 0.62
CHST3-201ENST00000373115 APAF1O14727 1248 aa18.93■□□□□ 0.62
CHST3-201ENST00000373115 EVA1CP58658 441 aa18.93■□□□□ 0.62
CHST3-201ENST00000373115 VPS37DQ86XT2 251 aa18.93■□□□□ 0.62
CHST3-201ENST00000373115 COG3Q96JB2 828 aa18.93■□□□□ 0.62
CHST3-201ENST00000373115 LRRFIP1Q32MZ4 808 aaKnown RBP18.92■□□□□ 0.62
CHST3-201ENST00000373115 ARGLU1Q9NWB6 273 aaPredicted RBP18.92■□□□□ 0.62
CHST3-201ENST00000373115 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
CHST3-201ENST00000373115 NEXNQ0ZGT2 675 aa18.92■□□□□ 0.62
CHST3-201ENST00000373115 TRDNQ13061 729 aa18.92■□□□□ 0.62
CHST3-201ENST00000373115 TEFQ10587 303 aa18.92■□□□□ 0.62
CHST3-201ENST00000373115 CT47A1Q5JQC4 288 aaPredicted RBP18.91■□□□□ 0.62
CHST3-201ENST00000373115 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.91■□□□□ 0.626e-6■■■■■ 48.1
CHST3-201ENST00000373115 CGNL1Q0VF96 1302 aa18.91■□□□□ 0.62
CHST3-201ENST00000373115 ERICH2A1L162 156 aa18.9■□□□□ 0.62
CHST3-201ENST00000373115 DDX19BQ9UMR2 479 aa18.9■□□□□ 0.62
CHST3-201ENST00000373115 TTC5Q8N0Z6 440 aa18.9■□□□□ 0.62
CHST3-201ENST00000373115 RNF214Q8ND24 703 aa18.9■□□□□ 0.62
CHST3-201ENST00000373115 CAGE1Q8TC20 777 aa18.9■□□□□ 0.62
CHST3-201ENST00000373115 RNF20Q5VTR2 975 aa18.89■□□□□ 0.62
CHST3-201ENST00000373115 EFCAB2Q5VUJ9 269 aa18.89■□□□□ 0.62
CHST3-201ENST00000373115 FYB1O15117 783 aa18.89■□□□□ 0.61
CHST3-201ENST00000373115 KRI1Q8N9T8 703 aaKnown RBP18.89■□□□□ 0.61
CHST3-201ENST00000373115 ODF2Q5BJF6 829 aa18.89■□□□□ 0.61
CHST3-201ENST00000373115 LNPKQ9C0E8 428 aa18.89■□□□□ 0.61
CHST3-201ENST00000373115 FANCIQ9NVI1 1328 aa18.89■□□□□ 0.61
CHST3-201ENST00000373115 HSP90B2PQ58FF3 399 aa18.89■□□□□ 0.61
CHST3-201ENST00000373115 CCDC43Q96MW1 224 aaKnown RBP18.88■□□□□ 0.61
CHST3-201ENST00000373115 ACBD3Q9H3P7 528 aa18.88■□□□□ 0.61
CHST3-201ENST00000373115 INTS3Q68E01 1043 aaKnown RBP18.88■□□□□ 0.61
CHST3-201ENST00000373115 ZBED9Q6R2W3 1325 aa18.88■□□□□ 0.61
CHST3-201ENST00000373115 DZIP1LQ8IYY4 767 aaKnown RBP18.88■□□□□ 0.61
CHST3-201ENST00000373115 HSP90AB2PQ58FF8 381 aa18.88■□□□□ 0.61
CHST3-201ENST00000373115 ZFYVE27Q5T4F4 411 aa18.88■□□□□ 0.61
CHST3-201ENST00000373115 CCDC73Q6ZRK6 1079 aa18.88■□□□□ 0.61
CHST3-201ENST00000373115 CCDC27Q2M243 656 aa18.88■□□□□ 0.61
CHST3-201ENST00000373115 CDR1P51861 262 aa18.88■□□□□ 0.61
CHST3-201ENST00000373115 NASPP49321 788 aaPredicted RBP18.87■□□□□ 0.61
CHST3-201ENST00000373115 MTMR7Q9Y216 660 aa18.87■□□□□ 0.61
CHST3-201ENST00000373115 EPS15P42566 896 aa18.87■□□□□ 0.61
CHST3-201ENST00000373115 G3BP1Q13283 466 aaKnown RBP eCLIP18.87■□□□□ 0.61
CHST3-201ENST00000373115 RIPK4P57078 832 aa18.87■□□□□ 0.61
CHST3-201ENST00000373115 SYTL4Q96C24 671 aaPredicted RBP18.86■□□□□ 0.61
CHST3-201ENST00000373115 NFKBIBQ15653 356 aa18.86■□□□□ 0.61
CHST3-201ENST00000373115 C22orf23Q9BZE7 217 aa18.86■□□□□ 0.61
CHST3-201ENST00000373115 NUCB2P80303 420 aa18.86■□□□□ 0.61
CHST3-201ENST00000373115 CARMIL2Q6F5E8 1435 aa18.86■□□□□ 0.61
CHST3-201ENST00000373115 OLFM4Q6UX06 510 aa18.86■□□□□ 0.61
CHST3-201ENST00000373115 H0YHG0 523 aa18.85■□□□□ 0.61
CHST3-201ENST00000373115 CCDC39Q9UFE4 941 aa18.85■□□□□ 0.61
CHST3-201ENST00000373115 FKBP5Q13451 457 aaPredicted RBP18.85■□□□□ 0.61
CHST3-201ENST00000373115 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.84■□□□□ 0.61
CHST3-201ENST00000373115 PRKRIP1Q9H875 184 aaPredicted RBP18.84■□□□□ 0.61
CHST3-201ENST00000373115 MINK1Q8N4C8 1332 aaPredicted RBP18.84■□□□□ 0.61
CHST3-201ENST00000373115 RBM10P98175 930 aaKnown RBP18.84■□□□□ 0.61
CHST3-201ENST00000373115 SAFBQ15424 915 aaKnown RBP eCLIP18.83■□□□□ 0.61
CHST3-201ENST00000373115 PLCD4Q9BRC7 762 aa18.83■□□□□ 0.61
CHST3-201ENST00000373115 NEUROD6Q96NK8 337 aa18.81■□□□□ 0.6
CHST3-201ENST00000373115 SMC2O95347 1197 aa18.81■□□□□ 0.6
CHST3-201ENST00000373115 WASHC4Q2M389 1173 aa18.8■□□□□ 0.6
CHST3-201ENST00000373115 CAVIN1Q6NZI2 390 aaKnown RBP18.8■□□□□ 0.6
CHST3-201ENST00000373115 EVC2Q86UK5 1308 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms