RNA–Protein interactions for RNA: ENST00000373109.6

SPOCK2-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPOCK2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-202ENST00000373109 NGDNQ8NEJ9 315 aaKnown RBP19.02■□□□□ 0.64
SPOCK2-202ENST00000373109 BRPF3Q9ULD4 1205 aa19.02■□□□□ 0.64
SPOCK2-202ENST00000373109 VPS37CA5D8V6 355 aaPredicted RBP19.02■□□□□ 0.63
SPOCK2-202ENST00000373109 ANO2Q9NQ90 1003 aa19.02■□□□□ 0.63
SPOCK2-202ENST00000373109 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
SPOCK2-202ENST00000373109 DDX19BQ9UMR2 479 aa19.01■□□□□ 0.63
SPOCK2-202ENST00000373109 IFT57Q9NWB7 429 aa19.01■□□□□ 0.63
SPOCK2-202ENST00000373109 ZKSCAN1P17029 563 aaPredicted RBP19■□□□□ 0.63
SPOCK2-202ENST00000373109 EFCAB2Q5VUJ9 269 aa19■□□□□ 0.63
SPOCK2-202ENST00000373109 ATAD2BQ9ULI0 1458 aa19■□□□□ 0.63
SPOCK2-202ENST00000373109 DZIP1LQ8IYY4 767 aaKnown RBP19■□□□□ 0.63
SPOCK2-202ENST00000373109 WWC1Q8IX03 1113 aa18.99■□□□□ 0.63
SPOCK2-202ENST00000373109 C22orf23Q9BZE7 217 aa18.99■□□□□ 0.63
SPOCK2-202ENST00000373109 AKAP17AQ02040 695 aaKnown RBP18.99■□□□□ 0.63
SPOCK2-202ENST00000373109 LNPKQ9C0E8 428 aa18.99■□□□□ 0.63
SPOCK2-202ENST00000373109 RNF214Q8ND24 703 aa18.99■□□□□ 0.63
SPOCK2-202ENST00000373109 IPO7O95373 1038 aaKnown RBP18.98■□□□□ 0.63
SPOCK2-202ENST00000373109 PCMTD1Q96MG8 357 aaPredicted RBP18.98■□□□□ 0.63
SPOCK2-202ENST00000373109 IL27Q8NEV9 243 aa18.98■□□□□ 0.63
SPOCK2-202ENST00000373109 NUCB2P80303 420 aa18.97■□□□□ 0.63
SPOCK2-202ENST00000373109 NASPP49321 788 aaPredicted RBP18.97■□□□□ 0.63
SPOCK2-202ENST00000373109 MRE11P49959 708 aa18.97■□□□□ 0.63
SPOCK2-202ENST00000373109 USP47Q96K76 1375 aa18.96■□□□□ 0.63
SPOCK2-202ENST00000373109 RUFY2Q8WXA3 655 aa18.96■□□□□ 0.63
SPOCK2-202ENST00000373109 TPM2P07951 284 aa18.96■□□□□ 0.63
SPOCK2-202ENST00000373109 CHMP4CQ96CF2 233 aa18.95■□□□□ 0.62
SPOCK2-202ENST00000373109 CPLX2Q6PUV4 134 aaKnown RBP18.95■□□□□ 0.62
SPOCK2-202ENST00000373109 SASS6Q6UVJ0 657 aa18.95■□□□□ 0.62
SPOCK2-202ENST00000373109 NECTIN2Q92692 538 aa18.95■□□□□ 0.62
SPOCK2-202ENST00000373109 SMC3Q9UQE7 1217 aa18.95■□□□□ 0.62
SPOCK2-202ENST00000373109 MNS1Q8NEH6 495 aa18.95■□□□□ 0.62
SPOCK2-202ENST00000373109 CPLX1O14810 134 aa18.94■□□□□ 0.62
SPOCK2-202ENST00000373109 FOSBP53539 338 aa18.94■□□□□ 0.62
SPOCK2-202ENST00000373109 SYNE3Q6ZMZ3 975 aa18.94■□□□□ 0.62
SPOCK2-202ENST00000373109 EIF2S2P20042 333 aaKnown RBP18.93■□□□□ 0.62
SPOCK2-202ENST00000373109 GTF2E1P29083 439 aaPredicted RBP18.93■□□□□ 0.62
SPOCK2-202ENST00000373109 TMX4Q9H1E5 349 aaPredicted RBP18.93■□□□□ 0.62
SPOCK2-202ENST00000373109 TRIM29Q14134 588 aa18.93■□□□□ 0.62
SPOCK2-202ENST00000373109 NGEFQ8N5V2 710 aa18.92■□□□□ 0.62
SPOCK2-202ENST00000373109 PANK1Q8TE04 598 aa18.92■□□□□ 0.62
SPOCK2-202ENST00000373109 TRAK2O60296 914 aa18.92■□□□□ 0.62
SPOCK2-202ENST00000373109 C9orf78Q9NZ63 289 aaPredicted RBP18.91■□□□□ 0.62
SPOCK2-202ENST00000373109 FHOD3Q2V2M9 1422 aa18.91■□□□□ 0.62
SPOCK2-202ENST00000373109 ARGLU1Q9NWB6 273 aaPredicted RBP18.91■□□□□ 0.62
SPOCK2-202ENST00000373109 IFIT2P09913 472 aaKnown RBP18.91■□□□□ 0.62
SPOCK2-202ENST00000373109 INTS3Q68E01 1043 aaKnown RBP18.91■□□□□ 0.62
SPOCK2-202ENST00000373109 CADPSQ9ULU8 1353 aa18.91■□□□□ 0.62
SPOCK2-202ENST00000373109 ANKRD20A12PQ8NF67 263 aa18.9■□□□□ 0.62
SPOCK2-202ENST00000373109 G3V3G9 751 aa18.9■□□□□ 0.62
SPOCK2-202ENST00000373109 RIPK4P57078 832 aa18.9■□□□□ 0.62
SPOCK2-202ENST00000373109 DCAF8Q5TAQ9 597 aa18.9■□□□□ 0.62
SPOCK2-202ENST00000373109 API5Q9BZZ5 524 aaKnown RBP18.89■□□□□ 0.62
SPOCK2-202ENST00000373109 CCDC39Q9UFE4 941 aa18.89■□□□□ 0.62
SPOCK2-202ENST00000373109 WASHC2CQ9Y4E1 1318 aa18.89■□□□□ 0.61
SPOCK2-202ENST00000373109 CCDC144AA2RUR9 1427 aa18.89■□□□□ 0.61
SPOCK2-202ENST00000373109 APPP05067 770 aa18.89■□□□□ 0.61
SPOCK2-202ENST00000373109 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
SPOCK2-202ENST00000373109 RBM10P98175 930 aaKnown RBP18.88■□□□□ 0.61
SPOCK2-202ENST00000373109 CAVIN1Q6NZI2 390 aaKnown RBP18.88■□□□□ 0.61
SPOCK2-202ENST00000373109 CCDC73Q6ZRK6 1079 aa18.88■□□□□ 0.61
SPOCK2-202ENST00000373109 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
SPOCK2-202ENST00000373109 DCAF8L1A6NGE4 600 aa18.88■□□□□ 0.61
SPOCK2-202ENST00000373109 COG3Q96JB2 828 aa18.88■□□□□ 0.61
SPOCK2-202ENST00000373109 TEFQ10587 303 aa18.87■□□□□ 0.61
SPOCK2-202ENST00000373109 RNF20Q5VTR2 975 aa18.87■□□□□ 0.61
SPOCK2-202ENST00000373109 HSP90B2PQ58FF3 399 aa18.87■□□□□ 0.61
SPOCK2-202ENST00000373109 RUFY1Q96T51 708 aa18.86■□□□□ 0.61
SPOCK2-202ENST00000373109 FKBP5Q13451 457 aaPredicted RBP18.86■□□□□ 0.61
SPOCK2-202ENST00000373109 MAP7D2Q96T17 732 aa18.85■□□□□ 0.61
SPOCK2-202ENST00000373109 NEXNQ0ZGT2 675 aa18.85■□□□□ 0.61
SPOCK2-202ENST00000373109 FBXO3Q9UK99 471 aa18.85■□□□□ 0.61
SPOCK2-202ENST00000373109 DIAPH1O60610 1272 aaKnown RBP18.84■□□□□ 0.61
SPOCK2-202ENST00000373109 HOOK1Q9UJC3 728 aaKnown RBP18.84■□□□□ 0.61
SPOCK2-202ENST00000373109 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
SPOCK2-202ENST00000373109 NOM1Q5C9Z4 860 aaKnown RBP18.83■□□□□ 0.61
SPOCK2-202ENST00000373109 MTERF4Q7Z6M4 381 aaKnown RBP18.83■□□□□ 0.61
SPOCK2-202ENST00000373109 PKNOX2Q96KN3 472 aa18.83■□□□□ 0.61
SPOCK2-202ENST00000373109 C1orf141Q5JVX7 400 aa18.83■□□□□ 0.6
SPOCK2-202ENST00000373109 MINK1Q8N4C8 1332 aaPredicted RBP18.83■□□□□ 0.6
SPOCK2-202ENST00000373109 RAD21O60216 631 aa18.83■□□□□ 0.6
SPOCK2-202ENST00000373109 NAP1L1P55209 391 aaKnown RBP18.83■□□□□ 0.6
SPOCK2-202ENST00000373109 LRRFIP1Q32MZ4 808 aaKnown RBP18.83■□□□□ 0.6
SPOCK2-202ENST00000373109 CCDC47Q96A33 483 aaKnown RBP18.83■□□□□ 0.6
SPOCK2-202ENST00000373109 TRDNQ13061 729 aa18.82■□□□□ 0.6
SPOCK2-202ENST00000373109 EVC2Q86UK5 1308 aa18.82■□□□□ 0.6
SPOCK2-202ENST00000373109 AK7Q96M32 723 aa18.82■□□□□ 0.6
SPOCK2-202ENST00000373109 CCDC27Q2M243 656 aa18.82■□□□□ 0.6
SPOCK2-202ENST00000373109 CDC45O75419 566 aa18.81■□□□□ 0.6
SPOCK2-202ENST00000373109 NFXL1Q6ZNB6 911 aa18.81■□□□□ 0.6
SPOCK2-202ENST00000373109 PDILTQ8N807 584 aa18.81■□□□□ 0.6
SPOCK2-202ENST00000373109 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.81■□□□□ 0.6
SPOCK2-202ENST00000373109 ACBD3Q9H3P7 528 aa18.81■□□□□ 0.6
SPOCK2-202ENST00000373109 KIF7Q2M1P5 1343 aa18.81■□□□□ 0.6
SPOCK2-202ENST00000373109 RUNDC1Q96C34 613 aa18.81■□□□□ 0.6
SPOCK2-202ENST00000373109 TRIM5Q9C035 493 aa18.81■□□□□ 0.6
SPOCK2-202ENST00000373109 PRPF40AO75400 957 aaKnown RBP18.81■□□□□ 0.6
SPOCK2-202ENST00000373109 CDCA7LQ96GN5 454 aa18.81■□□□□ 0.6
SPOCK2-202ENST00000373109 SDF4Q9BRK5 362 aa18.81■□□□□ 0.6
SPOCK2-202ENST00000373109 G3BP1Q13283 466 aaKnown RBP eCLIP18.8■□□□□ 0.6
SPOCK2-202ENST00000373109 CALRP27797 417 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms