RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 PLEKHG1Q9ULL1 1385 aa34.03■■■■□ 3.04
COL9A2-201ENST00000372736 SLC4A1APQ9BWU0 796 aaKnown RBP33.99■■■■□ 3.03
COL9A2-201ENST00000372736 UBAP1LF5GYI3 381 aa33.98■■■■□ 3.03
COL9A2-201ENST00000372736 SLC26A8Q96RN1 970 aa33.98■■■■□ 3.03
COL9A2-201ENST00000372736 PPP1R15AO75807 674 aaPredicted RBP33.97■■■■□ 3.03
COL9A2-201ENST00000372736 HDGFP51858 240 aaKnown RBP33.97■■■■□ 3.03
COL9A2-201ENST00000372736 NWD1Q149M9 1564 aa33.97■■■■□ 3.03
COL9A2-201ENST00000372736 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.96■■■■□ 3.03
COL9A2-201ENST00000372736 KIF1BO60333 1816 aa33.95■■■■□ 3.02
COL9A2-201ENST00000372736 XIRP1Q702N8 1843 aaKnown RBP33.95■■■■□ 3.02
COL9A2-201ENST00000372736 SETD5Q9C0A6 1442 aa33.94■■■■□ 3.02
COL9A2-201ENST00000372736 ALKQ9UM73 1620 aa33.93■■■■□ 3.02
COL9A2-201ENST00000372736 NUTM2DQ5VT03 806 aaPredicted RBP33.91■■■■□ 3.02
COL9A2-201ENST00000372736 SENP3Q9H4L4 574 aaPredicted RBP33.91■■■■□ 3.02
COL9A2-201ENST00000372736 DIP2AQ14689 1571 aa33.9■■■■□ 3.02
COL9A2-201ENST00000372736 ADAMTS13Q76LX8 1427 aa33.9■■■■□ 3.02
COL9A2-201ENST00000372736 BCANQ96GW7 911 aa33.9■■■■□ 3.02
COL9A2-201ENST00000372736 KCNA6P17658 529 aa33.88■■■■□ 3.01
COL9A2-201ENST00000372736 NEXMIFQ5QGS0 1516 aa33.88■■■■□ 3.01
COL9A2-201ENST00000372736 CHD2O14647 1828 aaKnown RBP33.88■■■■□ 3.01
COL9A2-201ENST00000372736 NKTRP30414 1462 aaKnown RBP33.88■■■■□ 3.01
COL9A2-201ENST00000372736 NRXN3Q9Y4C0 1643 aa33.86■■■■□ 3.01
COL9A2-201ENST00000372736 FOXD1Q16676 465 aa33.84■■■■□ 3.01
COL9A2-201ENST00000372736 SETBP1Q9Y6X0 1596 aa33.84■■■■□ 3.01
COL9A2-201ENST00000372736 RAB3GAP2Q9H2M9 1393 aa33.84■■■■□ 3.01
COL9A2-201ENST00000372736 TOM1O60784 492 aa33.83■■■■□ 3.01
COL9A2-201ENST00000372736 ZNF326Q5BKZ1 582 aaKnown RBP33.83■■■■□ 3.01
COL9A2-201ENST00000372736 MPHOSPH9Q99550 1183 aa33.82■■■■□ 3
COL9A2-201ENST00000372736 TBX22Q9Y458 520 aa33.82■■■■□ 3
COL9A2-201ENST00000372736 ACIN1Q9UKV3 1341 aaKnown RBP33.8■■■■□ 3
COL9A2-201ENST00000372736 TMEM94Q12767 1356 aa33.79■■■■□ 3
COL9A2-201ENST00000372736 PIK3R4Q99570 1358 aa33.75■■■□□ 2.99
COL9A2-201ENST00000372736 PIP4K2BP78356 416 aa33.75■■■□□ 2.99
COL9A2-201ENST00000372736 PPLO60437 1756 aa33.73■■■□□ 2.99
COL9A2-201ENST00000372736 CCDC144AA2RUR9 1427 aa33.73■■■□□ 2.99
COL9A2-201ENST00000372736 SCAF1Q9H7N4 1312 aaKnown RBP33.73■■■□□ 2.99
COL9A2-201ENST00000372736 PROSER2Q86WR7 435 aaPredicted RBP33.72■■■□□ 2.99
COL9A2-201ENST00000372736 PTPRUQ92729 1446 aa33.69■■■□□ 2.98
COL9A2-201ENST00000372736 XRN1Q8IZH2 1706 aaKnown RBP33.68■■■□□ 2.98
COL9A2-201ENST00000372736 RBM33Q96EV2 1170 aaKnown RBP33.68■■■□□ 2.98
COL9A2-201ENST00000372736 SPATA31E1Q6ZUB1 1445 aa33.67■■■□□ 2.98
COL9A2-201ENST00000372736 RPGRIP1LQ68CZ1 1315 aa33.65■■■□□ 2.98
COL9A2-201ENST00000372736 SETD1AO15047 1707 aaKnown RBP33.65■■■□□ 2.98
COL9A2-201ENST00000372736 IFT172Q9UG01 1749 aa33.63■■■□□ 2.97
COL9A2-201ENST00000372736 METP08581 1390 aa33.62■■■□□ 2.97
COL9A2-201ENST00000372736 HSPA1LP34931 641 aa33.61■■■□□ 2.97
COL9A2-201ENST00000372736 VGFO15240 615 aaPredicted RBP33.59■■■□□ 2.97
COL9A2-201ENST00000372736 NCOA3Q9Y6Q9 1424 aa33.59■■■□□ 2.97
COL9A2-201ENST00000372736 MSH6P52701 1360 aa33.59■■■□□ 2.97
COL9A2-201ENST00000372736 AMOTL2Q9Y2J4 779 aa33.58■■■□□ 2.97
COL9A2-201ENST00000372736 HRCP23327 699 aa33.57■■■□□ 2.96
COL9A2-201ENST00000372736 ROBO1Q9Y6N7 1651 aa33.52■■■□□ 2.96
COL9A2-201ENST00000372736 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.51■■■□□ 2.96
COL9A2-201ENST00000372736 RGL3Q3MIN7 710 aa33.51■■■□□ 2.95
COL9A2-201ENST00000372736 FAM135BQ49AJ0 1406 aa33.51■■■□□ 2.95
COL9A2-201ENST00000372736 ANKRD30BQ9BXX2 1392 aa33.49■■■□□ 2.95
COL9A2-201ENST00000372736 ADGRF5Q8IZF2 1346 aa33.47■■■□□ 2.95
COL9A2-201ENST00000372736 PRAG1Q86YV5 1406 aa33.45■■■□□ 2.94
COL9A2-201ENST00000372736 C14orf37Q86TY3 774 aa33.44■■■□□ 2.94
COL9A2-201ENST00000372736 PTCH1Q13635 1447 aa33.43■■■□□ 2.94
COL9A2-201ENST00000372736 PIK3C2GO75747 1445 aa33.42■■■□□ 2.94
COL9A2-201ENST00000372736 C19orf44Q9H6X5 657 aa33.41■■■□□ 2.94
COL9A2-201ENST00000372736 NALCNQ8IZF0 1738 aa33.41■■■□□ 2.94
COL9A2-201ENST00000372736 DCCP43146 1447 aa33.4■■■□□ 2.94
COL9A2-201ENST00000372736 SLAIN2Q9P270 581 aa33.4■■■□□ 2.94
COL9A2-201ENST00000372736 MYOM2P54296 1465 aa33.39■■■□□ 2.94
COL9A2-201ENST00000372736 DISP3Q9P2K9 1392 aa33.38■■■□□ 2.93
COL9A2-201ENST00000372736 ASXL1Q8IXJ9 1541 aa33.38■■■□□ 2.93
COL9A2-201ENST00000372736 NRXN1Q9ULB1 1477 aa33.37■■■□□ 2.93
COL9A2-201ENST00000372736 ADGRL3Q9HAR2 1447 aa33.37■■■□□ 2.93
COL9A2-201ENST00000372736 CADPS2Q86UW7 1296 aa33.36■■■□□ 2.93
COL9A2-201ENST00000372736 ROBO2Q9HCK4 1378 aa33.35■■■□□ 2.93
COL9A2-201ENST00000372736 MED1Q15648 1581 aaPredicted RBP33.35■■■□□ 2.93
COL9A2-201ENST00000372736 ATF3P18847 181 aa33.34■■■□□ 2.93
COL9A2-201ENST00000372736 LAMC1P11047 1609 aa33.3■■■□□ 2.92
COL9A2-201ENST00000372736 KNDC1Q76NI1 1749 aa33.3■■■□□ 2.92
COL9A2-201ENST00000372736 PHLPP1O60346 1717 aa33.29■■■□□ 2.92
COL9A2-201ENST00000372736 TECPR2O15040 1411 aa33.28■■■□□ 2.92
COL9A2-201ENST00000372736 MST1RQ04912 1400 aa33.28■■■□□ 2.92
COL9A2-201ENST00000372736 LRPPRCP42704 1394 aaKnown RBP33.25■■■□□ 2.91
COL9A2-201ENST00000372736 COL16A1Q07092 1604 aaPredicted RBP33.24■■■□□ 2.91
COL9A2-201ENST00000372736 AHDC1Q5TGY3 1603 aaPredicted RBP33.24■■■□□ 2.91
COL9A2-201ENST00000372736 C14orf93Q9H972 538 aaKnown RBP33.21■■■□□ 2.91
COL9A2-201ENST00000372736 TMEM132EQ6IEE7 984 aa33.2■■■□□ 2.91
COL9A2-201ENST00000372736 ABCC11Q96J66 1382 aa33.2■■■□□ 2.9
COL9A2-201ENST00000372736 YTHDC2Q9H6S0 1430 aaKnown RBP33.19■■■□□ 2.9
COL9A2-201ENST00000372736 BRINP3Q76B58 766 aa33.18■■■□□ 2.9
COL9A2-201ENST00000372736 STK26Q9P289 416 aa33.17■■■□□ 2.9
COL9A2-201ENST00000372736 CFAP70Q5T0N1 1121 aa33.16■■■□□ 2.9
COL9A2-201ENST00000372736 DHX57Q6P158 1386 aaKnown RBP33.16■■■□□ 2.9
COL9A2-201ENST00000372736 CDC42BPGQ6DT37 1551 aa33.16■■■□□ 2.9
COL9A2-201ENST00000372736 NHSL1Q5SYE7 1610 aa33.15■■■□□ 2.9
COL9A2-201ENST00000372736 ADGRB1O14514 1584 aa33.13■■■□□ 2.89
COL9A2-201ENST00000372736 C1orf167Q5SNV9 1468 aa33.12■■■□□ 2.89
COL9A2-201ENST00000372736 DCAF11Q8TEB1 546 aa33.12■■■□□ 2.89
COL9A2-201ENST00000372736 PLEKHH1Q9ULM0 1364 aa33.11■■■□□ 2.89
COL9A2-201ENST00000372736 ILDR2Q71H61 639 aa33.1■■■□□ 2.89
COL9A2-201ENST00000372736 WAPLQ7Z5K2 1190 aa33.09■■■□□ 2.89
COL9A2-201ENST00000372736 KDM2AQ9Y2K7 1162 aa33.08■■■□□ 2.89
COL9A2-201ENST00000372736 JCADQ9P266 1359 aa33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms