RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 CEP152O94986 1710 aa22.06■■□□□ 1.12
PCIF1-201ENST00000372409 CLASP1Q7Z460 1538 aa22.05■■□□□ 1.12
PCIF1-201ENST00000372409 PTPRTO14522 1441 aa22.04■■□□□ 1.12
PCIF1-201ENST00000372409 STAC3Q96MF2 364 aa22.02■■□□□ 1.12
PCIF1-201ENST00000372409 PDE4AP27815 886 aa22.01■■□□□ 1.11
PCIF1-201ENST00000372409 EIF3AQ14152 1382 aaKnown RBP22.01■■□□□ 1.11
PCIF1-201ENST00000372409 SCAPERQ9BY12 1400 aa22.01■■□□□ 1.11
PCIF1-201ENST00000372409 FANCAO15360 1455 aa22.01■■□□□ 1.11
PCIF1-201ENST00000372409 SYNMO15061 1565 aa22.01■■□□□ 1.11
PCIF1-201ENST00000372409 PLEKHH1Q9ULM0 1364 aa22.01■■□□□ 1.11
PCIF1-201ENST00000372409 ATP7AQ04656 1500 aa22■■□□□ 1.11
PCIF1-201ENST00000372409 C20orf194Q5TEA3 1177 aa22■■□□□ 1.11
PCIF1-201ENST00000372409 TET3O43151 1660 aa22■■□□□ 1.11
PCIF1-201ENST00000372409 CFAP70Q5T0N1 1121 aa22■■□□□ 1.11
PCIF1-201ENST00000372409 ASXL1Q8IXJ9 1541 aa21.99■■□□□ 1.11
PCIF1-201ENST00000372409 DEPDC5O75140 1603 aa21.99■■□□□ 1.11
PCIF1-201ENST00000372409 SKAP1Q86WV1 359 aa21.99■■□□□ 1.11
PCIF1-201ENST00000372409 CCDC146Q8IYE0 955 aa21.98■■□□□ 1.11
PCIF1-201ENST00000372409 ARAP3Q8WWN8 1544 aa21.98■■□□□ 1.11
PCIF1-201ENST00000372409 GOLGA2Q08379 1002 aa21.96■■□□□ 1.11
PCIF1-201ENST00000372409 DUSP27Q5VZP5 1158 aa21.96■■□□□ 1.11
PCIF1-201ENST00000372409 UGGT1Q9NYU2 1555 aa21.96■■□□□ 1.11
PCIF1-201ENST00000372409 BACH2Q9BYV9 841 aa21.95■■□□□ 1.1
PCIF1-201ENST00000372409 ADGRL1O94910 1474 aa21.95■■□□□ 1.1
PCIF1-201ENST00000372409 MS4A1P11836 297 aa21.95■■□□□ 1.1
PCIF1-201ENST00000372409 DEKP35659 375 aaKnown RBP21.95■■□□□ 1.1
PCIF1-201ENST00000372409 ADGRF5Q8IZF2 1346 aa21.94■■□□□ 1.1
PCIF1-201ENST00000372409 INO80Q9ULG1 1556 aaPredicted RBP21.94■■□□□ 1.1
PCIF1-201ENST00000372409 MYOM1P52179 1685 aa21.93■■□□□ 1.1
PCIF1-201ENST00000372409 KDM5AP29375 1690 aaKnown RBP21.92■■□□□ 1.1
PCIF1-201ENST00000372409 PIK3C2GO75747 1445 aa21.92■■□□□ 1.1
PCIF1-201ENST00000372409 CHGAP10645 457 aaKnown RBP21.92■■□□□ 1.1
PCIF1-201ENST00000372409 ABCA9Q8IUA7 1624 aa21.91■■□□□ 1.1
PCIF1-201ENST00000372409 VWDEQ8N2E2 1590 aa21.9■■□□□ 1.1
PCIF1-201ENST00000372409 ZNF521Q96K83 1311 aa21.9■■□□□ 1.1
PCIF1-201ENST00000372409 APAF1O14727 1248 aa21.89■■□□□ 1.1
PCIF1-201ENST00000372409 RTL5Q5HYW3 569 aaPredicted RBP21.88■■□□□ 1.09
PCIF1-201ENST00000372409 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.88■■□□□ 1.09
PCIF1-201ENST00000372409 KIAA1210Q9ULL0 1709 aa21.88■■□□□ 1.09
PCIF1-201ENST00000372409 MAP3K4Q9Y6R4 1608 aa21.88■■□□□ 1.09
PCIF1-201ENST00000372409 NPC1L1Q9UHC9 1359 aa21.88■■□□□ 1.09
PCIF1-201ENST00000372409 ABCA6Q8N139 1617 aa21.87■■□□□ 1.09
PCIF1-201ENST00000372409 SLFN5Q08AF3 891 aa21.87■■□□□ 1.09
PCIF1-201ENST00000372409 ERVK-7P63135 1459 aa21.87■■□□□ 1.09
PCIF1-201ENST00000372409 CARD14Q9BXL6 1004 aa21.86■■□□□ 1.09
PCIF1-201ENST00000372409 KIF1BO60333 1816 aa21.86■■□□□ 1.09
PCIF1-201ENST00000372409 SLC24A1O60721 1099 aa21.86■■□□□ 1.09
PCIF1-201ENST00000372409 MROH1Q8NDA8 1641 aa21.85■■□□□ 1.09
PCIF1-201ENST00000372409 MYOM2P54296 1465 aa21.84■■□□□ 1.09
PCIF1-201ENST00000372409 SPINK5Q9NQ38 1064 aaPredicted RBP21.84■■□□□ 1.09
PCIF1-201ENST00000372409 ASXL2Q76L83 1435 aa21.82■■□□□ 1.08
PCIF1-201ENST00000372409 EFCAB6Q5THR3 1501 aa21.82■■□□□ 1.08
PCIF1-201ENST00000372409 CENPQQ7L2Z9 268 aaPredicted RBP21.82■■□□□ 1.08
PCIF1-201ENST00000372409 KDM2BQ8NHM5 1336 aa21.81■■□□□ 1.08
PCIF1-201ENST00000372409 TRAK1Q9UPV9 953 aa21.81■■□□□ 1.08
PCIF1-201ENST00000372409 LAS1LQ9Y4W2 734 aaKnown RBP21.81■■□□□ 1.08
PCIF1-201ENST00000372409 MROH2AA6NES4 1674 aa21.8■■□□□ 1.08
PCIF1-201ENST00000372409 TNNT2P45379 298 aaPredicted RBP21.8■■□□□ 1.08
PCIF1-201ENST00000372409 NOS1P29475 1434 aa21.8■■□□□ 1.08
PCIF1-201ENST00000372409 NEURL4Q96JN8 1562 aa21.79■■□□□ 1.08
PCIF1-201ENST00000372409 PPRC1Q5VV67 1664 aaKnown RBP21.79■■□□□ 1.08
PCIF1-201ENST00000372409 CENPJQ9HC77 1338 aaPredicted RBP21.79■■□□□ 1.08
PCIF1-201ENST00000372409 GGT6Q6P531 493 aa21.79■■□□□ 1.08
PCIF1-201ENST00000372409 CFAP65Q6ZU64 1925 aaKnown RBP21.78■■□□□ 1.08
PCIF1-201ENST00000372409 BCAR3O75815 825 aa21.78■■□□□ 1.08
PCIF1-201ENST00000372409 KIDINS220Q9ULH0 1771 aa21.78■■□□□ 1.08
PCIF1-201ENST00000372409 NKTRP30414 1462 aaKnown RBP21.77■■□□□ 1.08
PCIF1-201ENST00000372409 TRMT2AQ8IZ69 625 aaKnown RBP21.77■■□□□ 1.08
PCIF1-201ENST00000372409 E9PSI1 815 aa21.77■■□□□ 1.07
PCIF1-201ENST00000372409 DMRT2Q9Y5R5 561 aa21.76■■□□□ 1.07
PCIF1-201ENST00000372409 IFT172Q9UG01 1749 aa21.76■■□□□ 1.07
PCIF1-201ENST00000372409 SENP3Q9H4L4 574 aaPredicted RBP21.75■■□□□ 1.07
PCIF1-201ENST00000372409 TMEM132EQ6IEE7 984 aa21.75■■□□□ 1.07
PCIF1-201ENST00000372409 MORC1Q86VD1 984 aa21.75■■□□□ 1.07
PCIF1-201ENST00000372409 ZNF518AQ6AHZ1 1483 aa21.74■■□□□ 1.07
PCIF1-201ENST00000372409 RGS3P49796 1198 aa21.74■■□□□ 1.07
PCIF1-201ENST00000372409 NEUROD2Q15784 382 aa21.74■■□□□ 1.07
PCIF1-201ENST00000372409 SLC12A5Q9H2X9 1139 aa21.74■■□□□ 1.07
PCIF1-201ENST00000372409 NPM1P06748 294 aaKnown RBP eCLIP21.73■■□□□ 1.07
PCIF1-201ENST00000372409 NSD3Q9BZ95 1437 aa21.73■■□□□ 1.07
PCIF1-201ENST00000372409 DDRGK1Q96HY6 314 aa21.72■■□□□ 1.07
PCIF1-201ENST00000372409 NRXN1Q9ULB1 1477 aa21.71■■□□□ 1.07
PCIF1-201ENST00000372409 NEFMP07197 916 aa21.71■■□□□ 1.07
PCIF1-201ENST00000372409 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
PCIF1-201ENST00000372409 CANXP27824 592 aaKnown RBP21.71■■□□□ 1.07
PCIF1-201ENST00000372409 ADGRB3O60242 1522 aa21.7■■□□□ 1.06
PCIF1-201ENST00000372409 NUTM2DQ5VT03 806 aaPredicted RBP21.7■■□□□ 1.06
PCIF1-201ENST00000372409 RRP7AQ9Y3A4 280 aaKnown RBP21.69■■□□□ 1.06
PCIF1-201ENST00000372409 NPATQ14207 1427 aa21.69■■□□□ 1.06
PCIF1-201ENST00000372409 MYO3AQ8NEV4 1616 aa21.69■■□□□ 1.06
PCIF1-201ENST00000372409 POLR3AO14802 1390 aaPredicted RBP21.69■■□□□ 1.06
PCIF1-201ENST00000372409 WWC1Q8IX03 1113 aa21.69■■□□□ 1.06
PCIF1-201ENST00000372409 LMTK2Q8IWU2 1503 aa21.68■■□□□ 1.06
PCIF1-201ENST00000372409 FAM161AQ3B820 660 aa21.68■■□□□ 1.06
PCIF1-201ENST00000372409 C14orf93Q9H972 538 aaKnown RBP21.68■■□□□ 1.06
PCIF1-201ENST00000372409 NGEFQ8N5V2 710 aa21.67■■□□□ 1.06
PCIF1-201ENST00000372409 SETBP1Q9Y6X0 1596 aa21.65■■□□□ 1.06
PCIF1-201ENST00000372409 DAXXQ9UER7 740 aaPredicted RBP21.65■■□□□ 1.06
PCIF1-201ENST00000372409 QRICH2Q9H0J4 1663 aa21.65■■□□□ 1.06
PCIF1-201ENST00000372409 SLC4A3P48751 1232 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms