RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
CALCOCO2-202ENST00000372317 PRAG1Q86YV5 1406 aa16.53■□□□□ 0.24
CALCOCO2-202ENST00000372317 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
CALCOCO2-202ENST00000372317 KDM2AQ9Y2K7 1162 aa16.51■□□□□ 0.23
CALCOCO2-202ENST00000372317 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
CALCOCO2-202ENST00000372317 RALGAPBQ86X10 1494 aa16.49■□□□□ 0.23
CALCOCO2-202ENST00000372317 ZFYVE9O95405 1425 aa16.49■□□□□ 0.23
CALCOCO2-202ENST00000372317 NBPF8Q3BBV2 869 aa16.49■□□□□ 0.23
CALCOCO2-202ENST00000372317 RIMS2Q9UQ26 1411 aa16.49■□□□□ 0.23
CALCOCO2-202ENST00000372317 RPGRIP1LQ68CZ1 1315 aa16.48■□□□□ 0.23
CALCOCO2-202ENST00000372317 TRPM1Q7Z4N2 1603 aa16.48■□□□□ 0.23
CALCOCO2-202ENST00000372317 TMEM2Q9UHN6 1383 aa16.47■□□□□ 0.23
CALCOCO2-202ENST00000372317 ADGRF5Q8IZF2 1346 aa16.46■□□□□ 0.23
CALCOCO2-202ENST00000372317 PIK3C2GO75747 1445 aa16.46■□□□□ 0.23
CALCOCO2-202ENST00000372317 SLIT1O75093 1534 aa16.46■□□□□ 0.23
CALCOCO2-202ENST00000372317 ARHGAP23Q9P227 1491 aa16.46■□□□□ 0.23
CALCOCO2-202ENST00000372317 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
CALCOCO2-202ENST00000372317 STAC3Q96MF2 364 aa16.43■□□□□ 0.22
CALCOCO2-202ENST00000372317 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
CALCOCO2-202ENST00000372317 LAMC1P11047 1609 aa16.41■□□□□ 0.22
CALCOCO2-202ENST00000372317 SETD1BQ9UPS6 1966 aaKnown RBP16.4■□□□□ 0.22
CALCOCO2-202ENST00000372317 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
CALCOCO2-202ENST00000372317 VGFO15240 615 aaPredicted RBP16.4■□□□□ 0.22
CALCOCO2-202ENST00000372317 NRXN3Q9Y4C0 1643 aa16.4■□□□□ 0.22
CALCOCO2-202ENST00000372317 SCAF11Q99590 1463 aaKnown RBP16.4■□□□□ 0.22
CALCOCO2-202ENST00000372317 IQGAP1P46940 1657 aa16.4■□□□□ 0.22
CALCOCO2-202ENST00000372317 SETBP1Q9Y6X0 1596 aa16.39■□□□□ 0.21
CALCOCO2-202ENST00000372317 THEMISQ8N1K5 641 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO2-202ENST00000372317 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
CALCOCO2-202ENST00000372317 GPRASP1Q5JY77 1395 aa16.38■□□□□ 0.21
CALCOCO2-202ENST00000372317 LMTK3Q96Q04 1460 aa16.38■□□□□ 0.21
CALCOCO2-202ENST00000372317 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
CALCOCO2-202ENST00000372317 PLEKHG1Q9ULL1 1385 aa16.37■□□□□ 0.21
CALCOCO2-202ENST00000372317 ADGRB1O14514 1584 aa16.36■□□□□ 0.21
CALCOCO2-202ENST00000372317 ALKQ9UM73 1620 aa16.36■□□□□ 0.21
CALCOCO2-202ENST00000372317 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
CALCOCO2-202ENST00000372317 LTKP29376 864 aa16.35■□□□□ 0.21
CALCOCO2-202ENST00000372317 NBPF1Q3BBV0 1214 aa16.35■□□□□ 0.21
CALCOCO2-202ENST00000372317 CFAP70Q5T0N1 1121 aa16.35■□□□□ 0.21
CALCOCO2-202ENST00000372317 POLR1AO95602 1720 aaPredicted RBP16.34■□□□□ 0.21
CALCOCO2-202ENST00000372317 HDGFP51858 240 aaKnown RBP16.34■□□□□ 0.21
CALCOCO2-202ENST00000372317 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
CALCOCO2-202ENST00000372317 EID1Q9Y6B2 187 aa16.34■□□□□ 0.21
CALCOCO2-202ENST00000372317 USP47Q96K76 1375 aa16.34■□□□□ 0.21
CALCOCO2-202ENST00000372317 CARD11Q9BXL7 1154 aa16.33■□□□□ 0.2
CALCOCO2-202ENST00000372317 C14orf93Q9H972 538 aaKnown RBP16.33■□□□□ 0.2
CALCOCO2-202ENST00000372317 ADAMTS13Q76LX8 1427 aa16.33■□□□□ 0.2
CALCOCO2-202ENST00000372317 DIP2AQ14689 1571 aa16.31■□□□□ 0.2
CALCOCO2-202ENST00000372317 MED14O60244 1454 aa16.29■□□□□ 0.2
CALCOCO2-202ENST00000372317 ANKLE2Q86XL3 938 aa16.29■□□□□ 0.2
CALCOCO2-202ENST00000372317 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
CALCOCO2-202ENST00000372317 HSPA5P11021 654 aaKnown RBP16.28■□□□□ 0.2
CALCOCO2-202ENST00000372317 HSPA2P54652 639 aa16.28■□□□□ 0.2
CALCOCO2-202ENST00000372317 BCANQ96GW7 911 aa16.28■□□□□ 0.2
CALCOCO2-202ENST00000372317 EIF4G2P78344 907 aaKnown RBP eCLIP16.27■□□□□ 0.2
CALCOCO2-202ENST00000372317 TMEM132EQ6IEE7 984 aa16.27■□□□□ 0.2
CALCOCO2-202ENST00000372317 METP08581 1390 aa16.26■□□□□ 0.19
CALCOCO2-202ENST00000372317 YTHDC2Q9H6S0 1430 aaKnown RBP16.26■□□□□ 0.19
CALCOCO2-202ENST00000372317 EIF3AQ14152 1382 aaKnown RBP16.26■□□□□ 0.19
CALCOCO2-202ENST00000372317 ARHGEF28Q8N1W1 1705 aaKnown RBP16.25■□□□□ 0.19
CALCOCO2-202ENST00000372317 NCKAP5LQ9HCH0 1330 aa16.25■□□□□ 0.19
CALCOCO2-202ENST00000372317 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
CALCOCO2-202ENST00000372317 SLC26A8Q96RN1 970 aa16.24■□□□□ 0.19
CALCOCO2-202ENST00000372317 KNDC1Q76NI1 1749 aa16.24■□□□□ 0.19
CALCOCO2-202ENST00000372317 LRPPRCP42704 1394 aaKnown RBP16.24■□□□□ 0.19
CALCOCO2-202ENST00000372317 CPS1P31327 1500 aa16.23■□□□□ 0.19
CALCOCO2-202ENST00000372317 XRN1Q8IZH2 1706 aaKnown RBP16.22■□□□□ 0.19
CALCOCO2-202ENST00000372317 DLC1Q96QB1 1528 aa16.21■□□□□ 0.19
CALCOCO2-202ENST00000372317 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
CALCOCO2-202ENST00000372317 STRCQ7RTU9 1775 aa16.21■□□□□ 0.18
CALCOCO2-202ENST00000372317 TECPR2O15040 1411 aa16.2■□□□□ 0.18
CALCOCO2-202ENST00000372317 PTPRUQ92729 1446 aa16.2■□□□□ 0.18
CALCOCO2-202ENST00000372317 STK26Q9P289 416 aa16.2■□□□□ 0.18
CALCOCO2-202ENST00000372317 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
CALCOCO2-202ENST00000372317 QRICH2Q9H0J4 1663 aa16.2■□□□□ 0.18
CALCOCO2-202ENST00000372317 ST20-MTHFSA0A0A6YYL1 179 aa16.19■□□□□ 0.18
CALCOCO2-202ENST00000372317 TBX22Q9Y458 520 aa16.19■□□□□ 0.18
CALCOCO2-202ENST00000372317 ABCC11Q96J66 1382 aa16.18■□□□□ 0.18
CALCOCO2-202ENST00000372317 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
CALCOCO2-202ENST00000372317 NWD1Q149M9 1564 aa16.17■□□□□ 0.18
CALCOCO2-202ENST00000372317 PTCH1Q13635 1447 aa16.17■□□□□ 0.18
CALCOCO2-202ENST00000372317 CENPJQ9HC77 1338 aaPredicted RBP16.17■□□□□ 0.18
CALCOCO2-202ENST00000372317 ROBO2Q9HCK4 1378 aa16.15■□□□□ 0.18
CALCOCO2-202ENST00000372317 TESK2Q96S53 571 aa16.15■□□□□ 0.18
CALCOCO2-202ENST00000372317 PLEKHH1Q9ULM0 1364 aa16.14■□□□□ 0.17
CALCOCO2-202ENST00000372317 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
CALCOCO2-202ENST00000372317 FAM135BQ49AJ0 1406 aa16.14■□□□□ 0.17
CALCOCO2-202ENST00000372317 PRAM1Q96QH2 718 aa16.14■□□□□ 0.17
CALCOCO2-202ENST00000372317 DISP3Q9P2K9 1392 aa16.13■□□□□ 0.17
CALCOCO2-202ENST00000372317 TULP4Q9NRJ4 1543 aa16.13■□□□□ 0.17
CALCOCO2-202ENST00000372317 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
CALCOCO2-202ENST00000372317 CCDC7Q96M83 1385 aa16.12■□□□□ 0.17
CALCOCO2-202ENST00000372317 SAFB2Q14151 953 aaKnown RBP eCLIP16.11■□□□□ 0.17
CALCOCO2-202ENST00000372317 POGKQ9P215 609 aa16.11■□□□□ 0.17
CALCOCO2-202ENST00000372317 AMOTL2Q9Y2J4 779 aa16.11■□□□□ 0.17
CALCOCO2-202ENST00000372317 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
CALCOCO2-202ENST00000372317 C11orf95C9JLR9 678 aaPredicted RBP16.1■□□□□ 0.17
CALCOCO2-202ENST00000372317 KCNA6P17658 529 aa16.1■□□□□ 0.17
CALCOCO2-202ENST00000372317 KIF7Q2M1P5 1343 aa16.1■□□□□ 0.17
CALCOCO2-202ENST00000372317 WASHC2AQ641Q2 1341 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms