RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 SCAF11Q99590 1463 aaKnown RBP27.07■■□□□ 1.92
LHX3-202ENST00000371748 CHGAP10645 457 aaKnown RBP27.07■■□□□ 1.92
LHX3-202ENST00000371748 ADGRB3O60242 1522 aa27.06■■□□□ 1.92
LHX3-202ENST00000371748 SIGLEC1Q9BZZ2 1709 aa27.05■■□□□ 1.92
LHX3-202ENST00000371748 CFAP70Q5T0N1 1121 aa27.04■■□□□ 1.92
LHX3-202ENST00000371748 NOS1P29475 1434 aa27■■□□□ 1.91
LHX3-202ENST00000371748 FKBP8Q14318 412 aa27■■□□□ 1.91
LHX3-202ENST00000371748 PER1O15534 1290 aaPredicted RBP27■■□□□ 1.91
LHX3-202ENST00000371748 BCANQ96GW7 911 aa26.99■■□□□ 1.91
LHX3-202ENST00000371748 RALBP1Q15311 655 aa26.99■■□□□ 1.91
LHX3-202ENST00000371748 ZMYM4Q5VZL5 1548 aa26.98■■□□□ 1.91
LHX3-202ENST00000371748 KTN1Q86UP2 1357 aaKnown RBP26.98■■□□□ 1.91
LHX3-202ENST00000371748 PANK3Q9H999 370 aa26.98■■□□□ 1.91
LHX3-202ENST00000371748 MYBBP1AQ9BQG0 1328 aaKnown RBP26.98■■□□□ 1.91
LHX3-202ENST00000371748 NRXN1Q9ULB1 1477 aa26.98■■□□□ 1.91
LHX3-202ENST00000371748 ZC3H13Q5T200 1668 aaKnown RBP26.97■■□□□ 1.91
LHX3-202ENST00000371748 PPLO60437 1756 aa26.97■■□□□ 1.91
LHX3-202ENST00000371748 TMC1Q8TDI8 760 aa26.97■■□□□ 1.91
LHX3-202ENST00000371748 SYNMO15061 1565 aa26.96■■□□□ 1.91
LHX3-202ENST00000371748 EIF3AQ14152 1382 aaKnown RBP26.96■■□□□ 1.91
LHX3-202ENST00000371748 ZBED9Q6R2W3 1325 aa26.95■■□□□ 1.9
LHX3-202ENST00000371748 PARD3Q8TEW0 1356 aa26.93■■□□□ 1.9
LHX3-202ENST00000371748 PIK3C2BO00750 1634 aa26.93■■□□□ 1.9
LHX3-202ENST00000371748 PNISRQ8TF01 805 aaKnown RBP26.92■■□□□ 1.9
LHX3-202ENST00000371748 NEFLP07196 543 aa26.92■■□□□ 1.9
LHX3-202ENST00000371748 ARHGAP31Q2M1Z3 1444 aa26.91■■□□□ 1.9
LHX3-202ENST00000371748 BRD4O60885 1362 aaPredicted RBP26.91■■□□□ 1.9
LHX3-202ENST00000371748 CC2D1BQ5T0F9 858 aaKnown RBP26.9■■□□□ 1.9
LHX3-202ENST00000371748 ANP32EQ9BTT0 268 aa26.9■■□□□ 1.9
LHX3-202ENST00000371748 PIK3C2GO75747 1445 aa26.88■■□□□ 1.89
LHX3-202ENST00000371748 CDCA8Q53HL2 280 aa26.87■■□□□ 1.89
LHX3-202ENST00000371748 KIF13AQ9H1H9 1805 aa26.87■■□□□ 1.89
LHX3-202ENST00000371748 RPGRIP1LQ68CZ1 1315 aa26.85■■□□□ 1.89
LHX3-202ENST00000371748 SETBP1Q9Y6X0 1596 aa26.85■■□□□ 1.89
LHX3-202ENST00000371748 MYOM1P52179 1685 aa26.84■■□□□ 1.89
LHX3-202ENST00000371748 NLRP13Q86W25 1043 aa26.84■■□□□ 1.89
LHX3-202ENST00000371748 KDM5AP29375 1690 aaKnown RBP26.84■■□□□ 1.89
LHX3-202ENST00000371748 PREX1Q8TCU6 1659 aa26.84■■□□□ 1.89
LHX3-202ENST00000371748 NUTM2DQ5VT03 806 aaPredicted RBP26.84■■□□□ 1.89
LHX3-202ENST00000371748 IDI1Q13907 227 aa26.83■■□□□ 1.89
LHX3-202ENST00000371748 C14orf93Q9H972 538 aaKnown RBP26.82■■□□□ 1.88
LHX3-202ENST00000371748 SENP3-EIF4A1A0A087X0R7 540 aa26.82■■□□□ 1.88
LHX3-202ENST00000371748 NEXMIFQ5QGS0 1516 aa26.81■■□□□ 1.88
LHX3-202ENST00000371748 MYO3AQ8NEV4 1616 aa26.81■■□□□ 1.88
LHX3-202ENST00000371748 ERVK-7P63135 1459 aa26.81■■□□□ 1.88
LHX3-202ENST00000371748 LRPPRCP42704 1394 aaKnown RBP26.81■■□□□ 1.88
LHX3-202ENST00000371748 MYO5BQ9ULV0 1848 aa26.8■■□□□ 1.88
LHX3-202ENST00000371748 ADGRB1O14514 1584 aa26.79■■□□□ 1.88
LHX3-202ENST00000371748 REREQ9P2R6 1566 aa26.78■■□□□ 1.88
LHX3-202ENST00000371748 TMEM132EQ6IEE7 984 aa26.78■■□□□ 1.88
LHX3-202ENST00000371748 TRAK1Q9UPV9 953 aa26.78■■□□□ 1.88
LHX3-202ENST00000371748 SLC52A1Q9NWF4 448 aa26.77■■□□□ 1.88
LHX3-202ENST00000371748 KNSTRNQ9Y448 316 aa26.77■■□□□ 1.88
LHX3-202ENST00000371748 FBXO31Q5XUX0 539 aaPredicted RBP26.76■■□□□ 1.87
LHX3-202ENST00000371748 CENPJQ9HC77 1338 aaPredicted RBP26.75■■□□□ 1.87
LHX3-202ENST00000371748 AGLP35573 1532 aa26.75■■□□□ 1.87
LHX3-202ENST00000371748 VGFO15240 615 aaPredicted RBP26.75■■□□□ 1.87
LHX3-202ENST00000371748 SLC24A1O60721 1099 aa26.74■■□□□ 1.87
LHX3-202ENST00000371748 TMEM131LA2VDJ0 1609 aa26.73■■□□□ 1.87
LHX3-202ENST00000371748 CLTCQ00610 1675 aaKnown RBP26.72■■□□□ 1.87
LHX3-202ENST00000371748 QRICH2Q9H0J4 1663 aa26.72■■□□□ 1.87
LHX3-202ENST00000371748 IRX6P78412 446 aaPredicted RBP26.72■■□□□ 1.87
LHX3-202ENST00000371748 SBNO2Q9Y2G9 1366 aa26.72■■□□□ 1.87
LHX3-202ENST00000371748 AMER1Q5JTC6 1135 aaPredicted RBP26.71■■□□□ 1.87
LHX3-202ENST00000371748 MLECQ14165 292 aa26.7■■□□□ 1.86
LHX3-202ENST00000371748 SENP3Q9H4L4 574 aaPredicted RBP26.7■■□□□ 1.86
LHX3-202ENST00000371748 ASXL1Q8IXJ9 1541 aa26.69■■□□□ 1.86
LHX3-202ENST00000371748 RBM19Q9Y4C8 960 aaKnown RBP26.69■■□□□ 1.86
LHX3-202ENST00000371748 ARHGEF40Q8TER5 1519 aa26.67■■□□□ 1.86
LHX3-202ENST00000371748 SMG6Q86US8 1419 aaKnown RBP26.66■■□□□ 1.86
LHX3-202ENST00000371748 PPP6R1Q9UPN7 881 aa26.64■■□□□ 1.86
LHX3-202ENST00000371748 ARHGEF28Q8N1W1 1705 aaKnown RBP26.64■■□□□ 1.86
LHX3-202ENST00000371748 ZFYVE9O95405 1425 aa26.64■■□□□ 1.86
LHX3-202ENST00000371748 PPP2R1AP30153 589 aa26.62■■□□□ 1.85
LHX3-202ENST00000371748 NUDCQ9Y266 331 aa26.62■■□□□ 1.85
LHX3-202ENST00000371748 CARD14Q9BXL6 1004 aa26.6■■□□□ 1.85
LHX3-202ENST00000371748 NPC1L1Q9UHC9 1359 aa26.59■■□□□ 1.85
LHX3-202ENST00000371748 STAG3Q9UJ98 1225 aa26.59■■□□□ 1.85
LHX3-202ENST00000371748 SALL2Q9Y467 1007 aaPredicted RBP26.58■■□□□ 1.85
LHX3-202ENST00000371748 SPATA31D1Q6ZQQ2 1576 aa26.57■■□□□ 1.84
LHX3-202ENST00000371748 STK26Q9P289 416 aa26.55■■□□□ 1.84
LHX3-202ENST00000371748 BLMP54132 1417 aaPredicted RBP26.54■■□□□ 1.84
LHX3-202ENST00000371748 SAFB2Q14151 953 aaKnown RBP eCLIP26.53■■□□□ 1.84
LHX3-202ENST00000371748 SLC12A5Q9H2X9 1139 aa26.53■■□□□ 1.84
LHX3-202ENST00000371748 TULP4Q9NRJ4 1543 aa26.52■■□□□ 1.84
LHX3-202ENST00000371748 INSRP06213 1382 aa26.5■■□□□ 1.83
LHX3-202ENST00000371748 ADAMTS8Q9UP79 889 aa26.5■■□□□ 1.83
LHX3-202ENST00000371748 A2ML1A8K2U0 1454 aa26.5■■□□□ 1.83
LHX3-202ENST00000371748 EVC2Q86UK5 1308 aa26.5■■□□□ 1.83
LHX3-202ENST00000371748 ESF1Q9H501 851 aaKnown RBP26.49■■□□□ 1.83
LHX3-202ENST00000371748 ALKQ9UM73 1620 aa26.48■■□□□ 1.83
LHX3-202ENST00000371748 NSD3Q9BZ95 1437 aa26.48■■□□□ 1.83
LHX3-202ENST00000371748 ZMYM3Q14202 1370 aa26.46■■□□□ 1.83
LHX3-202ENST00000371748 WDR43Q15061 677 aaKnown RBP eCLIP26.46■■□□□ 1.83
LHX3-202ENST00000371748 ERICH6BQ5W0A0 696 aa26.46■■□□□ 1.83
LHX3-202ENST00000371748 YTHDC2Q9H6S0 1430 aaKnown RBP26.46■■□□□ 1.83
LHX3-202ENST00000371748 PTPRMP28827 1452 aa26.45■■□□□ 1.82
LHX3-202ENST00000371748 CABP2Q9NPB3 220 aa26.44■■□□□ 1.82
LHX3-202ENST00000371748 RIMS2Q9UQ26 1411 aa26.43■■□□□ 1.82
LHX3-202ENST00000371748 PRAM1Q96QH2 718 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms