RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 LTV1Q96GA3 475 aaPredicted RBP14.72□□□□□ -0.05
DEPDC1-201ENST00000370966 PRG4Q92954 1404 aaPredicted RBP14.72□□□□□ -0.05
DEPDC1-201ENST00000370966 KIF16BQ96L93 1317 aa14.71□□□□□ -0.06
DEPDC1-201ENST00000370966 DDX11L8A8MPP1 907 aa14.7□□□□□ -0.06
DEPDC1-201ENST00000370966 HECW1Q76N89 1606 aa14.7□□□□□ -0.06
DEPDC1-201ENST00000370966 ADAMTS8Q9UP79 889 aa14.7□□□□□ -0.06
DEPDC1-201ENST00000370966 KIAA2012Q0VF49 1180 aa14.7□□□□□ -0.06
DEPDC1-201ENST00000370966 CSPP1Q1MSJ5 1256 aa14.7□□□□□ -0.06
DEPDC1-201ENST00000370966 ABCA10Q8WWZ4 1543 aa14.69□□□□□ -0.06
DEPDC1-201ENST00000370966 GORABQ5T7V8 394 aa14.69□□□□□ -0.06
DEPDC1-201ENST00000370966 DRC7Q8IY82 874 aa14.69□□□□□ -0.06
DEPDC1-201ENST00000370966 NAIPQ13075 1403 aa14.69□□□□□ -0.06
DEPDC1-201ENST00000370966 GNL2Q13823 731 aaKnown RBP14.68□□□□□ -0.06
DEPDC1-201ENST00000370966 ROCK1Q13464 1354 aa14.68□□□□□ -0.06
DEPDC1-201ENST00000370966 MAP3K1Q13233 1512 aa14.68□□□□□ -0.06
DEPDC1-201ENST00000370966 GNAI1P63096 354 aa14.68□□□□□ -0.06
DEPDC1-201ENST00000370966 CFAP70Q5T0N1 1121 aa14.68□□□□□ -0.06
DEPDC1-201ENST00000370966 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
DEPDC1-201ENST00000370966 DAPK1P53355 1430 aa14.67□□□□□ -0.06
DEPDC1-201ENST00000370966 ZNF330Q9Y3S2 320 aaPredicted RBP14.67□□□□□ -0.06
DEPDC1-201ENST00000370966 TEFQ10587 303 aa14.67□□□□□ -0.06
DEPDC1-201ENST00000370966 NBPF1Q3BBV0 1214 aa14.66□□□□□ -0.06
DEPDC1-201ENST00000370966 PPP2R1AP30153 589 aa14.66□□□□□ -0.06
DEPDC1-201ENST00000370966 KIAA0586Q9BVV6 1533 aa14.66□□□□□ -0.06
DEPDC1-201ENST00000370966 SUPT6HQ7KZ85 1726 aaKnown RBP14.66□□□□□ -0.06
DEPDC1-201ENST00000370966 CHMP3Q9Y3E7 222 aa14.66□□□□□ -0.06
DEPDC1-201ENST00000370966 TAF7LQ5H9L4 462 aa14.65□□□□□ -0.06
DEPDC1-201ENST00000370966 PNISRQ8TF01 805 aaKnown RBP14.65□□□□□ -0.06
DEPDC1-201ENST00000370966 SCAPERQ9BY12 1400 aa14.65□□□□□ -0.06
DEPDC1-201ENST00000370966 REC8O95072 547 aa14.65□□□□□ -0.06
DEPDC1-201ENST00000370966 KIF3AQ9Y496 699 aa14.65□□□□□ -0.06
DEPDC1-201ENST00000370966 MTHFSP49914 203 aa14.65□□□□□ -0.07
DEPDC1-201ENST00000370966 EPRSP07814 1512 aaKnown RBP14.64□□□□□ -0.07
DEPDC1-201ENST00000370966 SKOR2Q2VWA4 1001 aaPredicted RBP14.64□□□□□ -0.07
DEPDC1-201ENST00000370966 C1orf141Q5JVX7 400 aa14.64□□□□□ -0.07
DEPDC1-201ENST00000370966 TMEM132EQ6IEE7 984 aa14.64□□□□□ -0.07
DEPDC1-201ENST00000370966 GGNBP2Q9H3C7 697 aa14.64□□□□□ -0.07
DEPDC1-201ENST00000370966 PHF14O94880 888 aa14.63□□□□□ -0.07
DEPDC1-201ENST00000370966 SLC4A3P48751 1232 aa14.63□□□□□ -0.07
DEPDC1-201ENST00000370966 TCP11L2Q8N4U5 519 aa14.63□□□□□ -0.07
DEPDC1-201ENST00000370966 GSE1Q14687 1217 aa14.63□□□□□ -0.07
DEPDC1-201ENST00000370966 FAM69CQ0P6D2 419 aa14.63□□□□□ -0.07
DEPDC1-201ENST00000370966 FOXD4L1Q9NU39 408 aa14.63□□□□□ -0.07
DEPDC1-201ENST00000370966 CCDC34Q96HJ3 373 aa14.62□□□□□ -0.07
DEPDC1-201ENST00000370966 WDR97A6NE52 1622 aa14.62□□□□□ -0.07
DEPDC1-201ENST00000370966 SNAPC4Q5SXM2 1469 aa14.62□□□□□ -0.07
DEPDC1-201ENST00000370966 BICRAQ9NZM4 1560 aa14.61□□□□□ -0.07
DEPDC1-201ENST00000370966 RILPL2Q969X0 211 aa14.61□□□□□ -0.07
DEPDC1-201ENST00000370966 CDCA7LQ96GN5 454 aa14.61□□□□□ -0.07
DEPDC1-201ENST00000370966 CHMP4CQ96CF2 233 aa14.61□□□□□ -0.07
DEPDC1-201ENST00000370966 CABP2Q9NPB3 220 aa14.61□□□□□ -0.07
DEPDC1-201ENST00000370966 ATP6V1DQ9Y5K8 247 aa14.61□□□□□ -0.07
DEPDC1-201ENST00000370966 PDE3AQ14432 1141 aa14.6□□□□□ -0.07
DEPDC1-201ENST00000370966 HSP90B1P14625 803 aaKnown RBP14.6□□□□□ -0.07
DEPDC1-201ENST00000370966 CHMP5Q9NZZ3 219 aa14.6□□□□□ -0.07
DEPDC1-201ENST00000370966 NEXNQ0ZGT2 675 aa14.59□□□□□ -0.07
DEPDC1-201ENST00000370966 NOL8Q76FK4 1167 aaKnown RBP14.59□□□□□ -0.07
DEPDC1-201ENST00000370966 DDX49Q9Y6V7 483 aaKnown RBP14.59□□□□□ -0.07
DEPDC1-201ENST00000370966 RUFY2Q8WXA3 655 aa14.59□□□□□ -0.07
DEPDC1-201ENST00000370966 PEG3Q9GZU2 1588 aa14.59□□□□□ -0.07
DEPDC1-201ENST00000370966 PANK1Q8TE04 598 aa14.59□□□□□ -0.07
DEPDC1-201ENST00000370966 SLC52A1Q9NWF4 448 aa14.58□□□□□ -0.08
DEPDC1-201ENST00000370966 TPM4P67936 248 aa14.57□□□□□ -0.08
DEPDC1-201ENST00000370966 FKBP5Q13451 457 aaPredicted RBP14.57□□□□□ -0.08
DEPDC1-201ENST00000370966 C9orf78Q9NZ63 289 aaPredicted RBP14.57□□□□□ -0.08
DEPDC1-201ENST00000370966 HMOX1P09601 288 aa14.56□□□□□ -0.08
DEPDC1-201ENST00000370966 DIAPH3Q9NSV4 1193 aa14.56□□□□□ -0.08
DEPDC1-201ENST00000370966 SMG6Q86US8 1419 aaKnown RBP14.56□□□□□ -0.08
DEPDC1-201ENST00000370966 PCF11O94913 1555 aaKnown RBP14.56□□□□□ -0.08
DEPDC1-201ENST00000370966 IQGAP2Q13576 1575 aa14.56□□□□□ -0.08
DEPDC1-201ENST00000370966 ANKRD30BQ9BXX2 1392 aa14.56□□□□□ -0.08
DEPDC1-201ENST00000370966 CUL7Q14999 1698 aa14.56□□□□□ -0.08
DEPDC1-201ENST00000370966 LNPKQ9C0E8 428 aa14.56□□□□□ -0.08
DEPDC1-201ENST00000370966 DDX58O95786 925 aaKnown RBP14.56□□□□□ -0.08
DEPDC1-201ENST00000370966 ERBINQ96RT1 1412 aa14.55□□□□□ -0.08
DEPDC1-201ENST00000370966 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
DEPDC1-201ENST00000370966 CDK13Q14004 1512 aaKnown RBP14.55□□□□□ -0.08
DEPDC1-201ENST00000370966 TSPYL4Q9UJ04 414 aa14.55□□□□□ -0.08
DEPDC1-201ENST00000370966 RPGRIP1LQ68CZ1 1315 aa14.55□□□□□ -0.08
DEPDC1-201ENST00000370966 EIF2S2P20042 333 aaKnown RBP14.55□□□□□ -0.08
DEPDC1-201ENST00000370966 LRRFIP1Q32MZ4 808 aaKnown RBP14.55□□□□□ -0.08
DEPDC1-201ENST00000370966 HSP90AB4PQ58FF6 505 aa14.55□□□□□ -0.08
DEPDC1-201ENST00000370966 INTS3Q68E01 1043 aaKnown RBP14.55□□□□□ -0.08
DEPDC1-201ENST00000370966 C22orf23Q9BZE7 217 aa14.54□□□□□ -0.08
DEPDC1-201ENST00000370966 SLC12A5Q9H2X9 1139 aa14.54□□□□□ -0.08
DEPDC1-201ENST00000370966 CT47B1P0C2W7 299 aaPredicted RBP14.54□□□□□ -0.08
DEPDC1-201ENST00000370966 ZKSCAN1P17029 563 aaPredicted RBP14.54□□□□□ -0.08
DEPDC1-201ENST00000370966 PSME1Q06323 249 aa14.54□□□□□ -0.08
DEPDC1-201ENST00000370966 TTC5Q8N0Z6 440 aa14.54□□□□□ -0.08
DEPDC1-201ENST00000370966 WDR63Q8IWG1 891 aa14.52□□□□□ -0.08
DEPDC1-201ENST00000370966 NINLQ9Y2I6 1382 aa14.52□□□□□ -0.08
DEPDC1-201ENST00000370966 NUCB2P80303 420 aa14.51□□□□□ -0.09
DEPDC1-201ENST00000370966 CCDC184Q52MB2 194 aa14.51□□□□□ -0.09
DEPDC1-201ENST00000370966 IFIT2P09913 472 aaKnown RBP14.51□□□□□ -0.09
DEPDC1-201ENST00000370966 CCDC141Q6ZP82 1450 aa14.51□□□□□ -0.09
DEPDC1-201ENST00000370966 SF3A1Q15459 793 aaKnown RBP14.51□□□□□ -0.09
DEPDC1-201ENST00000370966 PRAM1Q96QH2 718 aa14.51□□□□□ -0.09
DEPDC1-201ENST00000370966 AKNAQ7Z591 1439 aa14.51□□□□□ -0.09
DEPDC1-201ENST00000370966 PRKAR2BP31323 418 aa14.51□□□□□ -0.09
DEPDC1-201ENST00000370966 ISY1Q9ULR0 285 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms