RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 SCAF11Q99590 1463 aaKnown RBP17.42■□□□□ 0.38
GPC3-201ENST00000370818 MROH2AA6NES4 1674 aa17.42■□□□□ 0.38
GPC3-201ENST00000370818 ADGRF5Q8IZF2 1346 aa17.42■□□□□ 0.38
GPC3-201ENST00000370818 PER1O15534 1290 aaPredicted RBP17.42■□□□□ 0.38
GPC3-201ENST00000370818 KIF1BO60333 1816 aa17.42■□□□□ 0.38
GPC3-201ENST00000370818 ADGRB3O60242 1522 aa17.42■□□□□ 0.38
GPC3-201ENST00000370818 KIAA1210Q9ULL0 1709 aa17.4■□□□□ 0.38
GPC3-201ENST00000370818 KTN1Q86UP2 1357 aaKnown RBP17.4■□□□□ 0.38
GPC3-201ENST00000370818 FANCIQ9NVI1 1328 aa17.4■□□□□ 0.38
GPC3-201ENST00000370818 IFT172Q9UG01 1749 aa17.39■□□□□ 0.38
GPC3-201ENST00000370818 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.38
GPC3-201ENST00000370818 CFAP70Q5T0N1 1121 aa17.39■□□□□ 0.37
GPC3-201ENST00000370818 RALBP1Q15311 655 aa17.38■□□□□ 0.37
GPC3-201ENST00000370818 CAMSAP1Q5T5Y3 1602 aa17.38■□□□□ 0.37
GPC3-201ENST00000370818 NOS1P29475 1434 aa17.38■□□□□ 0.37
GPC3-201ENST00000370818 NEFLP07196 543 aa17.37■□□□□ 0.37
GPC3-201ENST00000370818 ZBED9Q6R2W3 1325 aa17.36■□□□□ 0.37
GPC3-201ENST00000370818 MYBBP1AQ9BQG0 1328 aaKnown RBP17.36■□□□□ 0.37
GPC3-201ENST00000370818 ZMYM4Q5VZL5 1548 aa17.36■□□□□ 0.37
GPC3-201ENST00000370818 PARD3Q8TEW0 1356 aa17.36■□□□□ 0.37
GPC3-201ENST00000370818 SIGLEC1Q9BZZ2 1709 aa17.36■□□□□ 0.37
GPC3-201ENST00000370818 PNISRQ8TF01 805 aaKnown RBP17.35■□□□□ 0.37
GPC3-201ENST00000370818 PANK3Q9H999 370 aa17.35■□□□□ 0.37
GPC3-201ENST00000370818 CFAP65Q6ZU64 1925 aaKnown RBP17.35■□□□□ 0.37
GPC3-201ENST00000370818 CHGAP10645 457 aaKnown RBP17.35■□□□□ 0.37
GPC3-201ENST00000370818 ARHGAP31Q2M1Z3 1444 aa17.34■□□□□ 0.37
GPC3-201ENST00000370818 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
GPC3-201ENST00000370818 BRD4O60885 1362 aaPredicted RBP17.34■□□□□ 0.37
GPC3-201ENST00000370818 EIF3AQ14152 1382 aaKnown RBP17.33■□□□□ 0.37
GPC3-201ENST00000370818 SYNMO15061 1565 aa17.33■□□□□ 0.36
GPC3-201ENST00000370818 PIK3C2BO00750 1634 aa17.32■□□□□ 0.36
GPC3-201ENST00000370818 ZC3H13Q5T200 1668 aaKnown RBP17.31■□□□□ 0.36
GPC3-201ENST00000370818 PIK3C2GO75747 1445 aa17.31■□□□□ 0.36
GPC3-201ENST00000370818 TSPOAP1O95153 1857 aa17.3■□□□□ 0.36
GPC3-201ENST00000370818 RPGRIP1LQ68CZ1 1315 aa17.3■□□□□ 0.36
GPC3-201ENST00000370818 PPLO60437 1756 aa17.3■□□□□ 0.36
GPC3-201ENST00000370818 LRPPRCP42704 1394 aaKnown RBP17.3■□□□□ 0.36
GPC3-201ENST00000370818 DEKP35659 375 aaKnown RBP17.29■□□□□ 0.36
GPC3-201ENST00000370818 CDCA8Q53HL2 280 aa17.29■□□□□ 0.36
GPC3-201ENST00000370818 NLRP13Q86W25 1043 aa17.29■□□□□ 0.36
GPC3-201ENST00000370818 CC2D1BQ5T0F9 858 aaKnown RBP17.28■□□□□ 0.36
GPC3-201ENST00000370818 C14orf93Q9H972 538 aaKnown RBP17.28■□□□□ 0.36
GPC3-201ENST00000370818 SETBP1Q9Y6X0 1596 aa17.28■□□□□ 0.36
GPC3-201ENST00000370818 IDI1Q13907 227 aa17.27■□□□□ 0.35
GPC3-201ENST00000370818 ADGRB1O14514 1584 aa17.26■□□□□ 0.35
GPC3-201ENST00000370818 ANO8Q9HCE9 1232 aaPredicted RBP17.26■□□□□ 0.35
GPC3-201ENST00000370818 ERVK-7P63135 1459 aa17.25■□□□□ 0.35
GPC3-201ENST00000370818 NEXMIFQ5QGS0 1516 aa17.24■□□□□ 0.35
GPC3-201ENST00000370818 SLC52A1Q9NWF4 448 aa17.24■□□□□ 0.35
GPC3-201ENST00000370818 REREQ9P2R6 1566 aa17.24■□□□□ 0.35
GPC3-201ENST00000370818 MYO3AQ8NEV4 1616 aa17.24■□□□□ 0.35
GPC3-201ENST00000370818 MYOM1P52179 1685 aa17.24■□□□□ 0.35
GPC3-201ENST00000370818 SBNO2Q9Y2G9 1366 aa17.23■□□□□ 0.35
GPC3-201ENST00000370818 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
GPC3-201ENST00000370818 AMER1Q5JTC6 1135 aaPredicted RBP17.23■□□□□ 0.35
GPC3-201ENST00000370818 AGLP35573 1532 aa17.22■□□□□ 0.35
GPC3-201ENST00000370818 NUTM2DQ5VT03 806 aaPredicted RBP17.22■□□□□ 0.35
GPC3-201ENST00000370818 TMEM132EQ6IEE7 984 aa17.22■□□□□ 0.35
GPC3-201ENST00000370818 KNSTRNQ9Y448 316 aa17.22■□□□□ 0.35
GPC3-201ENST00000370818 PREX1Q8TCU6 1659 aa17.21■□□□□ 0.35
GPC3-201ENST00000370818 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
GPC3-201ENST00000370818 TRAK1Q9UPV9 953 aa17.21■□□□□ 0.35
GPC3-201ENST00000370818 KDM5AP29375 1690 aaKnown RBP17.21■□□□□ 0.34
GPC3-201ENST00000370818 CENPJQ9HC77 1338 aaPredicted RBP17.21■□□□□ 0.34
GPC3-201ENST00000370818 FBXO31Q5XUX0 539 aaPredicted RBP17.2■□□□□ 0.34
GPC3-201ENST00000370818 KIF13AQ9H1H9 1805 aa17.2■□□□□ 0.34
GPC3-201ENST00000370818 SENP3-EIF4A1A0A087X0R7 540 aa17.19■□□□□ 0.34
GPC3-201ENST00000370818 ZFYVE9O95405 1425 aa17.18■□□□□ 0.34
GPC3-201ENST00000370818 SMG6Q86US8 1419 aaKnown RBP17.18■□□□□ 0.34
GPC3-201ENST00000370818 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
GPC3-201ENST00000370818 ASXL1Q8IXJ9 1541 aa17.18■□□□□ 0.34
GPC3-201ENST00000370818 TMEM131LA2VDJ0 1609 aa17.17■□□□□ 0.34
GPC3-201ENST00000370818 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
GPC3-201ENST00000370818 IRX6P78412 446 aaPredicted RBP17.16■□□□□ 0.34
GPC3-201ENST00000370818 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
GPC3-201ENST00000370818 ARHGEF40Q8TER5 1519 aa17.14■□□□□ 0.33
GPC3-201ENST00000370818 PPP2R1AP30153 589 aa17.14■□□□□ 0.33
GPC3-201ENST00000370818 MYO5BQ9ULV0 1848 aa17.13■□□□□ 0.33
GPC3-201ENST00000370818 CARD14Q9BXL6 1004 aa17.13■□□□□ 0.33
GPC3-201ENST00000370818 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
GPC3-201ENST00000370818 INSRP06213 1382 aa17.12■□□□□ 0.33
GPC3-201ENST00000370818 CLTCQ00610 1675 aaKnown RBP17.12■□□□□ 0.33
GPC3-201ENST00000370818 MLECQ14165 292 aa17.11■□□□□ 0.33
GPC3-201ENST00000370818 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
GPC3-201ENST00000370818 ARHGEF28Q8N1W1 1705 aaKnown RBP17.09■□□□□ 0.33
GPC3-201ENST00000370818 SPATA31D1Q6ZQQ2 1576 aa17.09■□□□□ 0.33
GPC3-201ENST00000370818 ERICH6BQ5W0A0 696 aa17.08■□□□□ 0.32
GPC3-201ENST00000370818 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.32
GPC3-201ENST00000370818 SALL2Q9Y467 1007 aaPredicted RBP17.07■□□□□ 0.32
GPC3-201ENST00000370818 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
GPC3-201ENST00000370818 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
GPC3-201ENST00000370818 ADAMTS8Q9UP79 889 aa17.06■□□□□ 0.32
GPC3-201ENST00000370818 RNF123Q5XPI4 1314 aa17.06■□□□□ 0.32
GPC3-201ENST00000370818 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
GPC3-201ENST00000370818 PUS7Q96PZ0 661 aaKnown RBP17.04■□□□□ 0.32
GPC3-201ENST00000370818 STAG3Q9UJ98 1225 aa17.04■□□□□ 0.32
GPC3-201ENST00000370818 STK26Q9P289 416 aa17.04■□□□□ 0.32
GPC3-201ENST00000370818 EVC2Q86UK5 1308 aa17.03■□□□□ 0.32
GPC3-201ENST00000370818 NSD3Q9BZ95 1437 aa17.03■□□□□ 0.32
GPC3-201ENST00000370818 PTPRMP28827 1452 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms