RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 RIMS2Q9UQ26 1411 aa30.9■■■□□ 2.54
SMNDC1-201ENST00000369592 HSPA1LP34931 641 aa30.9■■■□□ 2.54
SMNDC1-201ENST00000369592 TRPM2O94759 1503 aa30.89■■■□□ 2.54
SMNDC1-201ENST00000369592 PIP4K2BP78356 416 aa30.86■■■□□ 2.53
SMNDC1-201ENST00000369592 CLTCL1P53675 1640 aa30.86■■■□□ 2.53
SMNDC1-201ENST00000369592 LRRC7Q96NW7 1537 aa30.85■■■□□ 2.53
SMNDC1-201ENST00000369592 PLEKHG1Q9ULL1 1385 aa30.85■■■□□ 2.53
SMNDC1-201ENST00000369592 TRIM52Q96A61 297 aa30.85■■■□□ 2.53
SMNDC1-201ENST00000369592 CHGAP10645 457 aaKnown RBP30.8■■■□□ 2.52
SMNDC1-201ENST00000369592 HDGFP51858 240 aaKnown RBP30.8■■■□□ 2.52
SMNDC1-201ENST00000369592 SLC4A1APQ9BWU0 796 aaKnown RBP30.8■■■□□ 2.52
SMNDC1-201ENST00000369592 SETD5Q9C0A6 1442 aa30.8■■■□□ 2.52
SMNDC1-201ENST00000369592 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.79■■■□□ 2.52
SMNDC1-201ENST00000369592 SLC26A8Q96RN1 970 aa30.78■■■□□ 2.52
SMNDC1-201ENST00000369592 XIRP1Q702N8 1843 aaKnown RBP30.77■■■□□ 2.52
SMNDC1-201ENST00000369592 ALKQ9UM73 1620 aa30.77■■■□□ 2.52
SMNDC1-201ENST00000369592 TOM1O60784 492 aa30.77■■■□□ 2.52
SMNDC1-201ENST00000369592 NWD1Q149M9 1564 aa30.76■■■□□ 2.52
SMNDC1-201ENST00000369592 ADAMTS13Q76LX8 1427 aa30.75■■■□□ 2.51
SMNDC1-201ENST00000369592 KCNA6P17658 529 aa30.75■■■□□ 2.51
SMNDC1-201ENST00000369592 PHF23Q9BUL5 403 aaPredicted RBP30.75■■■□□ 2.51
SMNDC1-201ENST00000369592 KIF1BO60333 1816 aa30.75■■■□□ 2.51
SMNDC1-201ENST00000369592 CHD2O14647 1828 aaKnown RBP30.73■■■□□ 2.51
SMNDC1-201ENST00000369592 ACIN1Q9UKV3 1341 aaKnown RBP30.73■■■□□ 2.51
SMNDC1-201ENST00000369592 TBX22Q9Y458 520 aa30.72■■■□□ 2.51
SMNDC1-201ENST00000369592 MPHOSPH9Q99550 1183 aa30.71■■■□□ 2.51
SMNDC1-201ENST00000369592 NEXMIFQ5QGS0 1516 aa30.7■■■□□ 2.51
SMNDC1-201ENST00000369592 PPP1R15AO75807 674 aaPredicted RBP30.7■■■□□ 2.51
SMNDC1-201ENST00000369592 DIP2AQ14689 1571 aa30.7■■■□□ 2.5
SMNDC1-201ENST00000369592 NUTM2DQ5VT03 806 aaPredicted RBP30.69■■■□□ 2.5
SMNDC1-201ENST00000369592 NRXN3Q9Y4C0 1643 aa30.69■■■□□ 2.5
SMNDC1-201ENST00000369592 RAB3GAP2Q9H2M9 1393 aa30.67■■■□□ 2.5
SMNDC1-201ENST00000369592 NKTRP30414 1462 aaKnown RBP30.67■■■□□ 2.5
SMNDC1-201ENST00000369592 SETBP1Q9Y6X0 1596 aa30.66■■■□□ 2.5
SMNDC1-201ENST00000369592 FOXD1Q16676 465 aa30.66■■■□□ 2.5
SMNDC1-201ENST00000369592 PIK3R4Q99570 1358 aa30.63■■■□□ 2.49
SMNDC1-201ENST00000369592 BCANQ96GW7 911 aa30.62■■■□□ 2.49
SMNDC1-201ENST00000369592 SENP3Q9H4L4 574 aaPredicted RBP30.61■■■□□ 2.49
SMNDC1-201ENST00000369592 TMEM94Q12767 1356 aa30.6■■■□□ 2.49
SMNDC1-201ENST00000369592 ZNF326Q5BKZ1 582 aaKnown RBP30.6■■■□□ 2.49
SMNDC1-201ENST00000369592 HRCP23327 699 aa30.59■■■□□ 2.49
SMNDC1-201ENST00000369592 SPATA31E1Q6ZUB1 1445 aa30.56■■■□□ 2.48
SMNDC1-201ENST00000369592 PPLO60437 1756 aa30.56■■■□□ 2.48
SMNDC1-201ENST00000369592 RPGRIP1LQ68CZ1 1315 aa30.56■■■□□ 2.48
SMNDC1-201ENST00000369592 PTPRUQ92729 1446 aa30.56■■■□□ 2.48
SMNDC1-201ENST00000369592 PROSER2Q86WR7 435 aaPredicted RBP30.55■■■□□ 2.48
SMNDC1-201ENST00000369592 CCDC144AA2RUR9 1427 aa30.54■■■□□ 2.48
SMNDC1-201ENST00000369592 XRN1Q8IZH2 1706 aaKnown RBP30.51■■■□□ 2.47
SMNDC1-201ENST00000369592 SETD1AO15047 1707 aaKnown RBP30.5■■■□□ 2.47
SMNDC1-201ENST00000369592 NCOA3Q9Y6Q9 1424 aa30.5■■■□□ 2.47
SMNDC1-201ENST00000369592 RBM33Q96EV2 1170 aaKnown RBP30.49■■■□□ 2.47
SMNDC1-201ENST00000369592 METP08581 1390 aa30.49■■■□□ 2.47
SMNDC1-201ENST00000369592 VGFO15240 615 aaPredicted RBP30.48■■■□□ 2.47
SMNDC1-201ENST00000369592 IFT172Q9UG01 1749 aa30.47■■■□□ 2.47
SMNDC1-201ENST00000369592 AMOTL2Q9Y2J4 779 aa30.45■■■□□ 2.47
SMNDC1-201ENST00000369592 ANKRD30BQ9BXX2 1392 aa30.42■■■□□ 2.46
SMNDC1-201ENST00000369592 FAM135BQ49AJ0 1406 aa30.4■■■□□ 2.46
SMNDC1-201ENST00000369592 MSH6P52701 1360 aa30.39■■■□□ 2.45
SMNDC1-201ENST00000369592 PRAG1Q86YV5 1406 aa30.38■■■□□ 2.45
SMNDC1-201ENST00000369592 ADGRF5Q8IZF2 1346 aa30.36■■■□□ 2.45
SMNDC1-201ENST00000369592 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.36■■■□□ 2.45
SMNDC1-201ENST00000369592 RGL3Q3MIN7 710 aa30.35■■■□□ 2.45
SMNDC1-201ENST00000369592 RGS17Q9UGC6 210 aaPredicted RBP30.34■■■□□ 2.45
SMNDC1-201ENST00000369592 C19orf44Q9H6X5 657 aa30.32■■■□□ 2.44
SMNDC1-201ENST00000369592 ROBO1Q9Y6N7 1651 aa30.3■■■□□ 2.44
SMNDC1-201ENST00000369592 NRXN1Q9ULB1 1477 aa30.3■■■□□ 2.44
SMNDC1-201ENST00000369592 PIK3C2GO75747 1445 aa30.3■■■□□ 2.44
SMNDC1-201ENST00000369592 SLAIN2Q9P270 581 aa30.29■■■□□ 2.44
SMNDC1-201ENST00000369592 PTCH1Q13635 1447 aa30.29■■■□□ 2.44
SMNDC1-201ENST00000369592 DCCP43146 1447 aa30.27■■■□□ 2.44
SMNDC1-201ENST00000369592 MYOM2P54296 1465 aa30.26■■■□□ 2.44
SMNDC1-201ENST00000369592 ASXL1Q8IXJ9 1541 aa30.25■■■□□ 2.43
SMNDC1-201ENST00000369592 CADPS2Q86UW7 1296 aa30.24■■■□□ 2.43
SMNDC1-201ENST00000369592 ROBO2Q9HCK4 1378 aa30.24■■■□□ 2.43
SMNDC1-201ENST00000369592 ADGRL3Q9HAR2 1447 aa30.22■■■□□ 2.43
SMNDC1-201ENST00000369592 NALCNQ8IZF0 1738 aa30.22■■■□□ 2.43
SMNDC1-201ENST00000369592 C14orf37Q86TY3 774 aa30.2■■■□□ 2.43
SMNDC1-201ENST00000369592 TECPR2O15040 1411 aa30.2■■■□□ 2.42
SMNDC1-201ENST00000369592 ATF3P18847 181 aa30.17■■■□□ 2.42
SMNDC1-201ENST00000369592 C14orf93Q9H972 538 aaKnown RBP30.17■■■□□ 2.42
SMNDC1-201ENST00000369592 KNDC1Q76NI1 1749 aa30.16■■■□□ 2.42
SMNDC1-201ENST00000369592 LRPPRCP42704 1394 aaKnown RBP30.15■■■□□ 2.42
SMNDC1-201ENST00000369592 MST1RQ04912 1400 aa30.15■■■□□ 2.42
SMNDC1-201ENST00000369592 ABCC11Q96J66 1382 aa30.15■■■□□ 2.42
SMNDC1-201ENST00000369592 POTEAQ6S8J7 498 aa30.14■■■□□ 2.42
SMNDC1-201ENST00000369592 LAMC1P11047 1609 aa30.14■■■□□ 2.41
SMNDC1-201ENST00000369592 DHX57Q6P158 1386 aaKnown RBP30.13■■■□□ 2.41
SMNDC1-201ENST00000369592 AHDC1Q5TGY3 1603 aaPredicted RBP30.11■■■□□ 2.41
SMNDC1-201ENST00000369592 TMEM132EQ6IEE7 984 aa30.1■■■□□ 2.41
SMNDC1-201ENST00000369592 PHLPP1O60346 1717 aa30.1■■■□□ 2.41
SMNDC1-201ENST00000369592 COL16A1Q07092 1604 aaPredicted RBP30.09■■■□□ 2.41
SMNDC1-201ENST00000369592 STAC3Q96MF2 364 aa30.09■■■□□ 2.41
SMNDC1-201ENST00000369592 YTHDC2Q9H6S0 1430 aaKnown RBP30.09■■■□□ 2.41
SMNDC1-201ENST00000369592 CFAP70Q5T0N1 1121 aa30.08■■■□□ 2.41
SMNDC1-201ENST00000369592 BRINP3Q76B58 766 aa30.08■■■□□ 2.41
SMNDC1-201ENST00000369592 SIRT1Q96EB6 747 aa30.05■■■□□ 2.4
SMNDC1-201ENST00000369592 ADGRB1O14514 1584 aa30.05■■■□□ 2.4
SMNDC1-201ENST00000369592 DCAF11Q8TEB1 546 aa30.03■■■□□ 2.4
SMNDC1-201ENST00000369592 C1orf167Q5SNV9 1468 aa30.02■■■□□ 2.4
SMNDC1-201ENST00000369592 STK26Q9P289 416 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms