RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 AMOTL1Q8IY63 956 aa19.22■□□□□ 0.67
PRDM1-203ENST00000369096 NOL10Q9BSC4 688 aaKnown RBP19.21■□□□□ 0.67
PRDM1-203ENST00000369096 RUFY2Q8WXA3 655 aa19.21■□□□□ 0.67
PRDM1-203ENST00000369096 MPHOSPH9Q99550 1183 aa19.21■□□□□ 0.67
PRDM1-203ENST00000369096 TRIM34Q9BYJ4 488 aa19.21■□□□□ 0.67
PRDM1-203ENST00000369096 NAP1L1P55209 391 aaKnown RBP19.21■□□□□ 0.66
PRDM1-203ENST00000369096 NUTM2DQ5VT03 806 aaPredicted RBP19.21■□□□□ 0.66
PRDM1-203ENST00000369096 CT47A1Q5JQC4 288 aaPredicted RBP19.2■□□□□ 0.66
PRDM1-203ENST00000369096 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
PRDM1-203ENST00000369096 REC8O95072 547 aa19.2■□□□□ 0.66
PRDM1-203ENST00000369096 MNS1Q8NEH6 495 aa19.2■□□□□ 0.66
PRDM1-203ENST00000369096 FBXW7Q969H0 707 aa19.19■□□□□ 0.66
PRDM1-203ENST00000369096 HOOK1Q9UJC3 728 aaKnown RBP19.19■□□□□ 0.66
PRDM1-203ENST00000369096 ZKSCAN2Q63HK3 967 aa19.19■□□□□ 0.66
PRDM1-203ENST00000369096 NGEFQ8N5V2 710 aa19.19■□□□□ 0.66
PRDM1-203ENST00000369096 ANO2Q9NQ90 1003 aa19.19■□□□□ 0.66
PRDM1-203ENST00000369096 CARMIL1Q5VZK9 1371 aa19.18■□□□□ 0.66
PRDM1-203ENST00000369096 AK7Q96M32 723 aa19.18■□□□□ 0.66
PRDM1-203ENST00000369096 PLIN1O60240 522 aa19.18■□□□□ 0.66
PRDM1-203ENST00000369096 HSP90B2PQ58FF3 399 aa19.18■□□□□ 0.66
PRDM1-203ENST00000369096 CCDC43Q96MW1 224 aaKnown RBP19.18■□□□□ 0.66
PRDM1-203ENST00000369096 VPS37CA5D8V6 355 aaPredicted RBP19.18■□□□□ 0.66
PRDM1-203ENST00000369096 KANK4Q5T7N3 995 aaPredicted RBP19.18■□□□□ 0.66
PRDM1-203ENST00000369096 ERICH3Q5RHP9 1530 aa19.18■□□□□ 0.66
PRDM1-203ENST00000369096 NEXNQ0ZGT2 675 aa19.18■□□□□ 0.66
PRDM1-203ENST00000369096 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.17■□□□□ 0.66
PRDM1-203ENST00000369096 ARGLU1Q9NWB6 273 aaPredicted RBP19.17■□□□□ 0.66
PRDM1-203ENST00000369096 CFTRP13569 1480 aa19.17■□□□□ 0.66
PRDM1-203ENST00000369096 TRDNQ13061 729 aa19.17■□□□□ 0.66
PRDM1-203ENST00000369096 C9orf78Q9NZ63 289 aaPredicted RBP19.17■□□□□ 0.66
PRDM1-203ENST00000369096 COG6Q9Y2V7 657 aa19.17■□□□□ 0.66
PRDM1-203ENST00000369096 MSH5O43196 834 aa19.16■□□□□ 0.66
PRDM1-203ENST00000369096 TEFQ10587 303 aa19.16■□□□□ 0.66
PRDM1-203ENST00000369096 IFT57Q9NWB7 429 aa19.16■□□□□ 0.66
PRDM1-203ENST00000369096 EID1Q9Y6B2 187 aa19.16■□□□□ 0.66
PRDM1-203ENST00000369096 ACBD3Q9H3P7 528 aa19.16■□□□□ 0.66
PRDM1-203ENST00000369096 ODF2Q5BJF6 829 aa19.16■□□□□ 0.66
PRDM1-203ENST00000369096 KIF3BO15066 747 aa19.15■□□□□ 0.66
PRDM1-203ENST00000369096 SASS6Q6UVJ0 657 aa19.15■□□□□ 0.66
PRDM1-203ENST00000369096 C1orf141Q5JVX7 400 aa19.15■□□□□ 0.66
PRDM1-203ENST00000369096 IFIT2P09913 472 aaKnown RBP19.14■□□□□ 0.65
PRDM1-203ENST00000369096 FAM43AQ8N2R8 423 aa19.14■□□□□ 0.65
PRDM1-203ENST00000369096 CUX1P39880 1505 aa19.14■□□□□ 0.65
PRDM1-203ENST00000369096 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.14■□□□□ 0.65
PRDM1-203ENST00000369096 EIF2S2P20042 333 aaKnown RBP19.13■□□□□ 0.65
PRDM1-203ENST00000369096 NOM1Q5C9Z4 860 aaKnown RBP19.13■□□□□ 0.65
PRDM1-203ENST00000369096 NFXL1Q6ZNB6 911 aa19.13■□□□□ 0.65
PRDM1-203ENST00000369096 BCL11BQ9C0K0 894 aaPredicted RBP19.13■□□□□ 0.65
PRDM1-203ENST00000369096 EXOC6Q8TAG9 804 aa19.13■□□□□ 0.65
PRDM1-203ENST00000369096 OFD1O75665 1012 aa19.13■□□□□ 0.65
PRDM1-203ENST00000369096 RNF20Q5VTR2 975 aa19.12■□□□□ 0.65
PRDM1-203ENST00000369096 CCDC73Q6ZRK6 1079 aa19.12■□□□□ 0.65
PRDM1-203ENST00000369096 TRAK1Q9UPV9 953 aa19.12■□□□□ 0.65
PRDM1-203ENST00000369096 ZFYVE27Q5T4F4 411 aa19.12■□□□□ 0.65
PRDM1-203ENST00000369096 L3MBTL2Q969R5 705 aa19.12■□□□□ 0.65
PRDM1-203ENST00000369096 CHMP5Q9NZZ3 219 aa19.12■□□□□ 0.65
PRDM1-203ENST00000369096 PHLDB1Q86UU1 1377 aa19.12■□□□□ 0.65
PRDM1-203ENST00000369096 PRXQ9BXM0 1461 aa19.12■□□□□ 0.65
PRDM1-203ENST00000369096 CCDC191Q8NCU4 936 aa19.12■□□□□ 0.65
PRDM1-203ENST00000369096 EFCAB2Q5VUJ9 269 aa19.11■□□□□ 0.65
PRDM1-203ENST00000369096 MAP7D2Q96T17 732 aa19.11■□□□□ 0.65
PRDM1-203ENST00000369096 VPS37DQ86XT2 251 aa19.11■□□□□ 0.65
PRDM1-203ENST00000369096 CGNL1Q0VF96 1302 aa19.11■□□□□ 0.65
PRDM1-203ENST00000369096 H0YHG0 523 aa19.11■□□□□ 0.65
PRDM1-203ENST00000369096 SMC3Q9UQE7 1217 aa19.11■□□□□ 0.65
PRDM1-203ENST00000369096 BIVM-ERCC5R4GMW8 1640 aa19.1■□□□□ 0.65
PRDM1-203ENST00000369096 FOSBP53539 338 aa19.1■□□□□ 0.65
PRDM1-203ENST00000369096 SAMD1Q6SPF0 538 aaPredicted RBP19.1■□□□□ 0.65
PRDM1-203ENST00000369096 TTC5Q8N0Z6 440 aa19.1■□□□□ 0.65
PRDM1-203ENST00000369096 CRBNQ96SW2 442 aa19.1■□□□□ 0.65
PRDM1-203ENST00000369096 E9PSI1 815 aa19.09■□□□□ 0.65
PRDM1-203ENST00000369096 SAFBQ15424 915 aaKnown RBP eCLIP19.09■□□□□ 0.65
PRDM1-203ENST00000369096 ERICH2A1L162 156 aa19.09■□□□□ 0.65
PRDM1-203ENST00000369096 CCDC173Q0VFZ6 552 aa19.09■□□□□ 0.65
PRDM1-203ENST00000369096 R3HCC1Q9Y3T6 440 aaKnown RBP19.09■□□□□ 0.65
PRDM1-203ENST00000369096 ARHGAP35Q9NRY4 1499 aa19.08■□□□□ 0.64
PRDM1-203ENST00000369096 DCTN1Q14203 1278 aa19.07■□□□□ 0.64
PRDM1-203ENST00000369096 NECTIN2Q92692 538 aa19.07■□□□□ 0.64
PRDM1-203ENST00000369096 HSP90AB2PQ58FF8 381 aa19.06■□□□□ 0.64
PRDM1-203ENST00000369096 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.06■□□□□ 0.64
PRDM1-203ENST00000369096 MYBBP1AQ9BQG0 1328 aaKnown RBP19.06■□□□□ 0.64
PRDM1-203ENST00000369096 RRP1P56182 461 aaKnown RBP19.06■□□□□ 0.64
PRDM1-203ENST00000369096 COG3Q96JB2 828 aa19.06■□□□□ 0.64
PRDM1-203ENST00000369096 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
PRDM1-203ENST00000369096 ANKRD30AQ9BXX3 1397 aa19.06■□□□□ 0.64
PRDM1-203ENST00000369096 G3BP1Q13283 466 aaKnown RBP eCLIP19.05■□□□□ 0.64
PRDM1-203ENST00000369096 EVA1CP58658 441 aa19.05■□□□□ 0.64
PRDM1-203ENST00000369096 PANK3Q9H999 370 aa19.05■□□□□ 0.64
PRDM1-203ENST00000369096 DDX19BQ9UMR2 479 aa19.05■□□□□ 0.64
PRDM1-203ENST00000369096 RAB3GAP2Q9H2M9 1393 aa19.05■□□□□ 0.64
PRDM1-203ENST00000369096 NUCB2P80303 420 aa19.05■□□□□ 0.64
PRDM1-203ENST00000369096 PDILTQ8N807 584 aa19.05■□□□□ 0.64
PRDM1-203ENST00000369096 CAGE1Q8TC20 777 aa19.04■□□□□ 0.64
PRDM1-203ENST00000369096 CWC22Q9HCG8 908 aaKnown RBP19.04■□□□□ 0.64
PRDM1-203ENST00000369096 WASHC2CQ9Y4E1 1318 aa19.04■□□□□ 0.64
PRDM1-203ENST00000369096 TTLL5Q6EMB2 1281 aa19.04■□□□□ 0.64
PRDM1-203ENST00000369096 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
PRDM1-203ENST00000369096 EPS15P42566 896 aa19.03■□□□□ 0.64
PRDM1-203ENST00000369096 SDF4Q9BRK5 362 aa19.03■□□□□ 0.64
PRDM1-203ENST00000369096 KIF15Q9NS87 1388 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms