RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 STAG3Q9UJ98 1225 aa19.38■□□□□ 0.69
CSNK1E-201ENST00000359867 TMEM131LA2VDJ0 1609 aa19.38■□□□□ 0.69
CSNK1E-201ENST00000359867 KDM4FA0A1W2PPD8 638 aa19.38■□□□□ 0.69
CSNK1E-201ENST00000359867 HSPA5P11021 654 aaKnown RBP19.37■□□□□ 0.69
CSNK1E-201ENST00000359867 NUTM2DQ5VT03 806 aaPredicted RBP19.36■□□□□ 0.69
CSNK1E-201ENST00000359867 NEURL4Q96JN8 1562 aa19.35■□□□□ 0.69
CSNK1E-201ENST00000359867 UHRF1BP1Q6BDS2 1440 aa19.35■□□□□ 0.69
CSNK1E-201ENST00000359867 MYO3AQ8NEV4 1616 aa19.34■□□□□ 0.69
CSNK1E-201ENST00000359867 A2ML1A8K2U0 1454 aa19.33■□□□□ 0.69
CSNK1E-201ENST00000359867 SENP3Q9H4L4 574 aaPredicted RBP19.33■□□□□ 0.69
CSNK1E-201ENST00000359867 NLRP1Q9C000 1473 aa19.32■□□□□ 0.68
CSNK1E-201ENST00000359867 IFT172Q9UG01 1749 aa19.32■□□□□ 0.68
CSNK1E-201ENST00000359867 PPLO60437 1756 aa19.31■□□□□ 0.68
CSNK1E-201ENST00000359867 UBR1Q8IWV7 1749 aa19.31■□□□□ 0.68
CSNK1E-201ENST00000359867 NEXMIFQ5QGS0 1516 aa19.31■□□□□ 0.68
CSNK1E-201ENST00000359867 ADGRF5Q8IZF2 1346 aa19.3■□□□□ 0.68
CSNK1E-201ENST00000359867 PRAG1Q86YV5 1406 aa19.3■□□□□ 0.68
CSNK1E-201ENST00000359867 SUPT16HQ9Y5B9 1047 aaKnown RBP19.3■□□□□ 0.68
CSNK1E-201ENST00000359867 CEP170BQ9Y4F5 1589 aaPredicted RBP19.27■□□□□ 0.68
CSNK1E-201ENST00000359867 RPGRIP1LQ68CZ1 1315 aa19.27■□□□□ 0.67
CSNK1E-201ENST00000359867 SETD1BQ9UPS6 1966 aaKnown RBP19.27■□□□□ 0.67
CSNK1E-201ENST00000359867 MYOM2P54296 1465 aa19.26■□□□□ 0.67
CSNK1E-201ENST00000359867 RALGAPBQ86X10 1494 aa19.26■□□□□ 0.67
CSNK1E-201ENST00000359867 RIMS2Q9UQ26 1411 aa19.25■□□□□ 0.67
CSNK1E-201ENST00000359867 WASHC2AQ641Q2 1341 aa19.25■□□□□ 0.67
CSNK1E-201ENST00000359867 KDM5AP29375 1690 aaKnown RBP19.24■□□□□ 0.67
CSNK1E-201ENST00000359867 ANP32CO43423 234 aa19.23■□□□□ 0.67
CSNK1E-201ENST00000359867 NBPF1Q3BBV0 1214 aa19.23■□□□□ 0.67
CSNK1E-201ENST00000359867 TRPM1Q7Z4N2 1603 aa19.23■□□□□ 0.67
CSNK1E-201ENST00000359867 TMEM2Q9UHN6 1383 aa19.23■□□□□ 0.67
CSNK1E-201ENST00000359867 ZFYVE9O95405 1425 aa19.23■□□□□ 0.67
CSNK1E-201ENST00000359867 VGFO15240 615 aaPredicted RBP19.22■□□□□ 0.67
CSNK1E-201ENST00000359867 ZNF142P52746 1687 aaPredicted RBP19.21■□□□□ 0.67
CSNK1E-201ENST00000359867 NRXN1Q9ULB1 1477 aa19.21■□□□□ 0.67
CSNK1E-201ENST00000359867 STAC3Q96MF2 364 aa19.21■□□□□ 0.67
CSNK1E-201ENST00000359867 CFAP70Q5T0N1 1121 aa19.21■□□□□ 0.66
CSNK1E-201ENST00000359867 CCDC7Q96M83 1385 aa19.2■□□□□ 0.66
CSNK1E-201ENST00000359867 PIK3C2GO75747 1445 aa19.2■□□□□ 0.66
CSNK1E-201ENST00000359867 CCER2I3L3R5 266 aa19.2■□□□□ 0.66
CSNK1E-201ENST00000359867 ROCK2O75116 1388 aaKnown RBP19.2■□□□□ 0.66
CSNK1E-201ENST00000359867 POLR1AO95602 1720 aaPredicted RBP19.2■□□□□ 0.66
CSNK1E-201ENST00000359867 THEMISQ8N1K5 641 aaPredicted RBP19.2■□□□□ 0.66
CSNK1E-201ENST00000359867 USP47Q96K76 1375 aa19.19■□□□□ 0.66
CSNK1E-201ENST00000359867 LTKP29376 864 aa19.19■□□□□ 0.66
CSNK1E-201ENST00000359867 CARD11Q9BXL7 1154 aa19.17■□□□□ 0.66
CSNK1E-201ENST00000359867 TXNDC2Q86VQ3 553 aa19.17■□□□□ 0.66
CSNK1E-201ENST00000359867 SLIT1O75093 1534 aa19.16■□□□□ 0.66
CSNK1E-201ENST00000359867 ARHGAP23Q9P227 1491 aa19.16■□□□□ 0.66
CSNK1E-201ENST00000359867 C11orf95C9JLR9 678 aaPredicted RBP19.16■□□□□ 0.66
CSNK1E-201ENST00000359867 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.15■□□□□ 0.66
CSNK1E-201ENST00000359867 TMEM132EQ6IEE7 984 aa19.13■□□□□ 0.65
CSNK1E-201ENST00000359867 BCANQ96GW7 911 aa19.13■□□□□ 0.65
CSNK1E-201ENST00000359867 C14orf93Q9H972 538 aaKnown RBP19.13■□□□□ 0.65
CSNK1E-201ENST00000359867 EID1Q9Y6B2 187 aa19.13■□□□□ 0.65
CSNK1E-201ENST00000359867 HDGFP51858 240 aaKnown RBP19.13■□□□□ 0.65
CSNK1E-201ENST00000359867 KIF7Q2M1P5 1343 aa19.13■□□□□ 0.65
CSNK1E-201ENST00000359867 KIAA1210Q9ULL0 1709 aa19.12■□□□□ 0.65
CSNK1E-201ENST00000359867 IQGAP1P46940 1657 aa19.11■□□□□ 0.65
CSNK1E-201ENST00000359867 GPRASP1Q5JY77 1395 aa19.11■□□□□ 0.65
CSNK1E-201ENST00000359867 HSPA2P54652 639 aa19.11■□□□□ 0.65
CSNK1E-201ENST00000359867 NRXN3Q9Y4C0 1643 aa19.11■□□□□ 0.65
CSNK1E-201ENST00000359867 SCAF11Q99590 1463 aaKnown RBP19.11■□□□□ 0.65
CSNK1E-201ENST00000359867 ALKQ9UM73 1620 aa19.1■□□□□ 0.65
CSNK1E-201ENST00000359867 LAMC1P11047 1609 aa19.1■□□□□ 0.65
CSNK1E-201ENST00000359867 ASXL1Q8IXJ9 1541 aa19.09■□□□□ 0.65
CSNK1E-201ENST00000359867 ADGRB1O14514 1584 aa19.08■□□□□ 0.65
CSNK1E-201ENST00000359867 PLEKHG1Q9ULL1 1385 aa19.08■□□□□ 0.64
CSNK1E-201ENST00000359867 ANKLE2Q86XL3 938 aa19.07■□□□□ 0.64
CSNK1E-201ENST00000359867 LMTK3Q96Q04 1460 aa19.07■□□□□ 0.64
CSNK1E-201ENST00000359867 SLC26A8Q96RN1 970 aa19.07■□□□□ 0.64
CSNK1E-201ENST00000359867 TSHZ2Q9NRE2 1034 aa19.07■□□□□ 0.64
CSNK1E-201ENST00000359867 SETBP1Q9Y6X0 1596 aa19.07■□□□□ 0.64
CSNK1E-201ENST00000359867 SETD1AO15047 1707 aaKnown RBP19.06■□□□□ 0.64
CSNK1E-201ENST00000359867 ADAMTS13Q76LX8 1427 aa19.05■□□□□ 0.64
CSNK1E-201ENST00000359867 NCKAP5LQ9HCH0 1330 aa19.05■□□□□ 0.64
CSNK1E-201ENST00000359867 ST20-MTHFSA0A0A6YYL1 179 aa19.04■□□□□ 0.64
CSNK1E-201ENST00000359867 STK26Q9P289 416 aa19.04■□□□□ 0.64
CSNK1E-201ENST00000359867 TRAK1Q9UPV9 953 aa19.04■□□□□ 0.64
CSNK1E-201ENST00000359867 METP08581 1390 aa19.04■□□□□ 0.64
CSNK1E-201ENST00000359867 YTHDC2Q9H6S0 1430 aaKnown RBP19■□□□□ 0.63
CSNK1E-201ENST00000359867 MED14O60244 1454 aa18.99■□□□□ 0.63
CSNK1E-201ENST00000359867 NPHP4O75161 1426 aaPredicted RBP18.98■□□□□ 0.63
CSNK1E-201ENST00000359867 ERICH6Q7L0X2 663 aa18.97■□□□□ 0.63
CSNK1E-201ENST00000359867 PRKRIP1Q9H875 184 aaPredicted RBP18.97■□□□□ 0.63
CSNK1E-201ENST00000359867 ARHGEF28Q8N1W1 1705 aaKnown RBP18.96■□□□□ 0.63
CSNK1E-201ENST00000359867 SAFB2Q14151 953 aaKnown RBP eCLIP18.96■□□□□ 0.63
CSNK1E-201ENST00000359867 FKBP8Q14318 412 aa18.96■□□□□ 0.63
CSNK1E-201ENST00000359867 TBX22Q9Y458 520 aa18.96■□□□□ 0.63
CSNK1E-201ENST00000359867 EIF3AQ14152 1382 aaKnown RBP18.95■□□□□ 0.62
CSNK1E-201ENST00000359867 PTPRUQ92729 1446 aa18.94■□□□□ 0.62
CSNK1E-201ENST00000359867 LRPPRCP42704 1394 aaKnown RBP18.94■□□□□ 0.62
CSNK1E-201ENST00000359867 TESK2Q96S53 571 aa18.94■□□□□ 0.62
CSNK1E-201ENST00000359867 DIP2AQ14689 1571 aa18.94■□□□□ 0.62
CSNK1E-201ENST00000359867 CENPJQ9HC77 1338 aaPredicted RBP18.92■□□□□ 0.62
CSNK1E-201ENST00000359867 STRCQ7RTU9 1775 aa18.92■□□□□ 0.62
CSNK1E-201ENST00000359867 PRAM1Q96QH2 718 aa18.92■□□□□ 0.62
CSNK1E-201ENST00000359867 POLR3GLQ9BT43 218 aa18.91■□□□□ 0.62
CSNK1E-201ENST00000359867 WAPLQ7Z5K2 1190 aa18.91■□□□□ 0.62
CSNK1E-201ENST00000359867 ABCC11Q96J66 1382 aa18.91■□□□□ 0.62
CSNK1E-201ENST00000359867 AMOTL2Q9Y2J4 779 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms