RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 PHLPP1O60346 1717 aa24.89■■□□□ 1.58
IFT20-202ENST00000357896 SPATA31A6Q5VVP1 1343 aa24.87■■□□□ 1.57
IFT20-202ENST00000357896 PTPN23Q9H3S7 1636 aa24.87■■□□□ 1.57
IFT20-202ENST00000357896 ZNF772Q68DY9 489 aaPredicted RBP24.87■■□□□ 1.57
IFT20-202ENST00000357896 CHIC2Q9UKJ5 165 aa24.86■■□□□ 1.57
IFT20-202ENST00000357896 PLEKHG1Q9ULL1 1385 aa24.85■■□□□ 1.57
IFT20-202ENST00000357896 PPP1R15AO75807 674 aaPredicted RBP24.85■■□□□ 1.57
IFT20-202ENST00000357896 NCOA3Q9Y6Q9 1424 aa24.85■■□□□ 1.57
IFT20-202ENST00000357896 SETD1AO15047 1707 aaKnown RBP24.84■■□□□ 1.57
IFT20-202ENST00000357896 APLP2Q06481 763 aa24.84■■□□□ 1.57
IFT20-202ENST00000357896 MEX3CQ5U5Q3 659 aaKnown RBP24.84■■□□□ 1.57
IFT20-202ENST00000357896 FGD6Q6ZV73 1430 aa24.83■■□□□ 1.57
IFT20-202ENST00000357896 C14orf37Q86TY3 774 aa24.82■■□□□ 1.56
IFT20-202ENST00000357896 TBX22Q9Y458 520 aa24.82■■□□□ 1.56
IFT20-202ENST00000357896 RPRD2Q5VT52 1461 aaKnown RBP24.82■■□□□ 1.56
IFT20-202ENST00000357896 UPF1Q92900 1129 aaKnown RBP eCLIP24.81■■□□□ 1.56
IFT20-202ENST00000357896 ZFYVE9O95405 1425 aa24.8■■□□□ 1.56
IFT20-202ENST00000357896 COL16A1Q07092 1604 aaPredicted RBP24.8■■□□□ 1.56
IFT20-202ENST00000357896 CADPS2Q86UW7 1296 aa24.8■■□□□ 1.56
IFT20-202ENST00000357896 CHD2O14647 1828 aaKnown RBP24.79■■□□□ 1.56
IFT20-202ENST00000357896 RIMS2Q9UQ26 1411 aa24.78■■□□□ 1.56
IFT20-202ENST00000357896 LOC105371045A0A1W2PR82 267 aa24.78■■□□□ 1.56
IFT20-202ENST00000357896 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.78■■□□□ 1.56
IFT20-202ENST00000357896 C19orf44Q9H6X5 657 aa24.78■■□□□ 1.56
IFT20-202ENST00000357896 ATF3P18847 181 aa24.77■■□□□ 1.56
IFT20-202ENST00000357896 TRIM52Q96A61 297 aa24.77■■□□□ 1.56
IFT20-202ENST00000357896 LRP6O75581 1613 aa24.76■■□□□ 1.55
IFT20-202ENST00000357896 RXRBP28702 533 aa24.74■■□□□ 1.55
IFT20-202ENST00000357896 PIK3R4Q99570 1358 aa24.71■■□□□ 1.55
IFT20-202ENST00000357896 AHDC1Q5TGY3 1603 aaPredicted RBP24.71■■□□□ 1.55
IFT20-202ENST00000357896 ADGRL2O95490 1459 aa24.7■■□□□ 1.55
IFT20-202ENST00000357896 ANKRD50Q9ULJ7 1429 aa24.69■■□□□ 1.54
IFT20-202ENST00000357896 TMEM131LA2VDJ0 1609 aa24.69■■□□□ 1.54
IFT20-202ENST00000357896 CHGAP10645 457 aaKnown RBP24.69■■□□□ 1.54
IFT20-202ENST00000357896 SHPRHQ149N8 1683 aa24.68■■□□□ 1.54
IFT20-202ENST00000357896 GCC2Q8IWJ2 1684 aa24.67■■□□□ 1.54
IFT20-202ENST00000357896 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.66■■□□□ 1.54
IFT20-202ENST00000357896 ADAMTS13Q76LX8 1427 aa24.66■■□□□ 1.54
IFT20-202ENST00000357896 DIP2AQ14689 1571 aa24.66■■□□□ 1.54
IFT20-202ENST00000357896 MYO5BQ9ULV0 1848 aa24.65■■□□□ 1.54
IFT20-202ENST00000357896 CDK12Q9NYV4 1490 aaPredicted RBP24.65■■□□□ 1.54
IFT20-202ENST00000357896 BRINP3Q76B58 766 aa24.65■■□□□ 1.54
IFT20-202ENST00000357896 NUTM2BA6NNL0 878 aaPredicted RBP24.64■■□□□ 1.54
IFT20-202ENST00000357896 NUTM2EB1AL46 878 aaPredicted RBP24.64■■□□□ 1.54
IFT20-202ENST00000357896 NUTM2AQ8IVF1 878 aaPredicted RBP24.64■■□□□ 1.54
IFT20-202ENST00000357896 NUTM2DQ5VT03 806 aaPredicted RBP24.63■■□□□ 1.53
IFT20-202ENST00000357896 AMOTL2Q9Y2J4 779 aa24.63■■□□□ 1.53
IFT20-202ENST00000357896 FAM50AQ14320 339 aaKnown RBP24.61■■□□□ 1.53
IFT20-202ENST00000357896 DCCP43146 1447 aa24.6■■□□□ 1.53
IFT20-202ENST00000357896 AFF2P51816 1311 aa24.6■■□□□ 1.53
IFT20-202ENST00000357896 TRPM2O94759 1503 aa24.59■■□□□ 1.53
IFT20-202ENST00000357896 LRRC59Q96AG4 307 aaKnown RBP24.58■■□□□ 1.53
IFT20-202ENST00000357896 SETD5Q9C0A6 1442 aa24.57■■□□□ 1.52
IFT20-202ENST00000357896 PTPRUQ92729 1446 aa24.53■■□□□ 1.52
IFT20-202ENST00000357896 ASXL1Q8IXJ9 1541 aa24.53■■□□□ 1.52
IFT20-202ENST00000357896 RBM6P78332 1123 aaKnown RBP24.53■■□□□ 1.52
IFT20-202ENST00000357896 QTRT2Q9H974 415 aaKnown RBP24.53■■□□□ 1.52
IFT20-202ENST00000357896 UNC13BO14795 1591 aa24.51■■□□□ 1.51
IFT20-202ENST00000357896 C8orf37Q96NL8 207 aa24.51■■□□□ 1.51
IFT20-202ENST00000357896 E9PCH4 1651 aa24.5■■□□□ 1.51
IFT20-202ENST00000357896 MST1RQ04912 1400 aa24.49■■□□□ 1.51
IFT20-202ENST00000357896 NGLY1Q96IV0 654 aa24.47■■□□□ 1.51
IFT20-202ENST00000357896 SRCAPQ6ZRS2 3230 aa24.46■■□□□ 1.51
IFT20-202ENST00000357896 RGS12O14924 1447 aa24.45■■□□□ 1.51
IFT20-202ENST00000357896 NHSL1Q5SYE7 1610 aa24.45■■□□□ 1.5
IFT20-202ENST00000357896 PNPLA6Q8IY17 1366 aa24.44■■□□□ 1.5
IFT20-202ENST00000357896 NUP155O75694 1391 aa24.43■■□□□ 1.5
IFT20-202ENST00000357896 IQGAP3Q86VI3 1631 aa24.43■■□□□ 1.5
IFT20-202ENST00000357896 FOXD1Q16676 465 aa24.43■■□□□ 1.5
IFT20-202ENST00000357896 XRN1Q8IZH2 1706 aaKnown RBP24.43■■□□□ 1.5
IFT20-202ENST00000357896 ROCK1Q13464 1354 aa24.42■■□□□ 1.5
IFT20-202ENST00000357896 SETBP1Q9Y6X0 1596 aa24.42■■□□□ 1.5
IFT20-202ENST00000357896 ZNF326Q5BKZ1 582 aaKnown RBP24.41■■□□□ 1.5
IFT20-202ENST00000357896 DDX17Q92841 729 aaKnown RBP24.4■■□□□ 1.5
IFT20-202ENST00000357896 ADGRL3Q9HAR2 1447 aa24.4■■□□□ 1.5
IFT20-202ENST00000357896 METP08581 1390 aa24.4■■□□□ 1.5
IFT20-202ENST00000357896 ADAMTS2O95450 1211 aa24.39■■□□□ 1.49
IFT20-202ENST00000357896 ATAD2Q6PL18 1390 aa24.39■■□□□ 1.49
IFT20-202ENST00000357896 NRXN3Q9Y4C0 1643 aa24.38■■□□□ 1.49
IFT20-202ENST00000357896 USP21Q9UK80 565 aa24.35■■□□□ 1.49
IFT20-202ENST00000357896 TRPC5Q9UL62 973 aaPredicted RBP24.34■■□□□ 1.49
IFT20-202ENST00000357896 ZRANB1Q9UGI0 708 aa24.32■■□□□ 1.48
IFT20-202ENST00000357896 C1orf167Q5SNV9 1468 aa24.32■■□□□ 1.48
IFT20-202ENST00000357896 SOS2Q07890 1332 aaPredicted RBP24.31■■□□□ 1.48
IFT20-202ENST00000357896 FNBP4Q8N3X1 1017 aaPredicted RBP24.3■■□□□ 1.48
IFT20-202ENST00000357896 PTCH1Q13635 1447 aa24.28■■□□□ 1.48
IFT20-202ENST00000357896 CCDC125Q86Z20 511 aa24.28■■□□□ 1.48
IFT20-202ENST00000357896 NALCNQ8IZF0 1738 aa24.27■■□□□ 1.48
IFT20-202ENST00000357896 LAMC1P11047 1609 aa24.26■■□□□ 1.47
IFT20-202ENST00000357896 ORAI2Q96SN7 254 aa24.26■■□□□ 1.47
IFT20-202ENST00000357896 SPHKAPQ2M3C7 1700 aa24.26■■□□□ 1.47
IFT20-202ENST00000357896 ITGAEP38570 1179 aa24.23■■□□□ 1.47
IFT20-202ENST00000357896 NEXMIFQ5QGS0 1516 aa24.22■■□□□ 1.47
IFT20-202ENST00000357896 ATRNO75882 1429 aa24.22■■□□□ 1.47
IFT20-202ENST00000357896 VGFO15240 615 aaPredicted RBP24.22■■□□□ 1.47
IFT20-202ENST00000357896 ROBO2Q9HCK4 1378 aa24.19■■□□□ 1.46
IFT20-202ENST00000357896 EP400Q96L91 3159 aa24.19■■□□□ 1.46
IFT20-202ENST00000357896 NPHP3Q7Z494 1330 aa24.17■■□□□ 1.46
IFT20-202ENST00000357896 COL22A1Q8NFW1 1626 aaPredicted RBP24.16■■□□□ 1.46
IFT20-202ENST00000357896 HFM1A2PYH4 1435 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms