RNA–Protein interactions for RNA: ENST00000357895.9

NEDD4L-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEDD4L, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-203ENST00000357895 A2MP01023 1474 aa12.11□□□□□ -0.47
NEDD4L-203ENST00000357895 IFT140Q96RY7 1462 aa12.11□□□□□ -0.47
NEDD4L-203ENST00000357895 CEP170Q5SW79 1584 aa12.1□□□□□ -0.47
NEDD4L-203ENST00000357895 INSRP06213 1382 aa12.1□□□□□ -0.47
NEDD4L-203ENST00000357895 NKTRP30414 1462 aaKnown RBP12.1□□□□□ -0.47
NEDD4L-203ENST00000357895 SHANK2Q9UPX8 1470 aa12.1□□□□□ -0.47
NEDD4L-203ENST00000357895 PMFBP1Q8TBY8 1022 aa12.1□□□□□ -0.47
NEDD4L-203ENST00000357895 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
NEDD4L-203ENST00000357895 CCDC141Q6ZP82 1450 aa12.09□□□□□ -0.47
NEDD4L-203ENST00000357895 GOLGA6L3A6NEY3 463 aa12.09□□□□□ -0.47
NEDD4L-203ENST00000357895 PDE3AQ14432 1141 aa12.09□□□□□ -0.47
NEDD4L-203ENST00000357895 KDM5DQ9BY66 1539 aa12.09□□□□□ -0.47
NEDD4L-203ENST00000357895 DMRT2Q9Y5R5 561 aa12.09□□□□□ -0.47
NEDD4L-203ENST00000357895 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.47
NEDD4L-203ENST00000357895 ATP10BO94823 1461 aa12.08□□□□□ -0.48
NEDD4L-203ENST00000357895 MFAP1P55081 439 aaKnown RBP12.08□□□□□ -0.48
NEDD4L-203ENST00000357895 FTSJ3Q8IY81 847 aaKnown RBP12.08□□□□□ -0.48
NEDD4L-203ENST00000357895 ZNF521Q96K83 1311 aa12.08□□□□□ -0.48
NEDD4L-203ENST00000357895 MORC1Q86VD1 984 aa12.07□□□□□ -0.48
NEDD4L-203ENST00000357895 E9PCH4 1651 aa12.07□□□□□ -0.48
NEDD4L-203ENST00000357895 RWDD1Q9H446 243 aaPredicted RBP12.07□□□□□ -0.48
NEDD4L-203ENST00000357895 PDZRN3Q9UPQ7 1066 aa12.07□□□□□ -0.48
NEDD4L-203ENST00000357895 PTPRGP23470 1445 aa12.07□□□□□ -0.48
NEDD4L-203ENST00000357895 UBE2Q2Q8WVN8 375 aa12.07□□□□□ -0.48
NEDD4L-203ENST00000357895 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
NEDD4L-203ENST00000357895 MAGI2Q86UL8 1455 aa12.06□□□□□ -0.48
NEDD4L-203ENST00000357895 CROCC2H7BZ55 1655 aa12.06□□□□□ -0.48
NEDD4L-203ENST00000357895 WWC1Q8IX03 1113 aa12.05□□□□□ -0.48
NEDD4L-203ENST00000357895 TBC1D2Q9BYX2 928 aa12.05□□□□□ -0.48
NEDD4L-203ENST00000357895 TRPM1Q7Z4N2 1603 aa12.05□□□□□ -0.48
NEDD4L-203ENST00000357895 HSP90AA1P07900 732 aaKnown RBP12.04□□□□□ -0.48
NEDD4L-203ENST00000357895 USP19O94966 1318 aa12.04□□□□□ -0.48
NEDD4L-203ENST00000357895 TNNQ9UQP3 1299 aa12.04□□□□□ -0.48
NEDD4L-203ENST00000357895 RRAGDQ9NQL2 400 aaPredicted RBP12.04□□□□□ -0.48
NEDD4L-203ENST00000357895 PLA2R1Q13018 1463 aa12.04□□□□□ -0.48
NEDD4L-203ENST00000357895 ARHGAP5Q13017 1502 aa12.04□□□□□ -0.48
NEDD4L-203ENST00000357895 SYNJ2O15056 1496 aa12.03□□□□□ -0.48
NEDD4L-203ENST00000357895 ABCC10Q5T3U5 1492 aa12.03□□□□□ -0.48
NEDD4L-203ENST00000357895 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
NEDD4L-203ENST00000357895 GLIPR1L2Q4G1C9 344 aa12.03□□□□□ -0.48
NEDD4L-203ENST00000357895 CFAP70Q5T0N1 1121 aa12.03□□□□□ -0.48
NEDD4L-203ENST00000357895 HSCBQ8IWL3 235 aa12.03□□□□□ -0.48
NEDD4L-203ENST00000357895 TCP11L2Q8N4U5 519 aa12.03□□□□□ -0.48
NEDD4L-203ENST00000357895 ERCC6Q03468 1493 aa12.02□□□□□ -0.48
NEDD4L-203ENST00000357895 TRMT2AQ8IZ69 625 aaKnown RBP12.02□□□□□ -0.48
NEDD4L-203ENST00000357895 EIF4G3O43432 1585 aaKnown RBP12.02□□□□□ -0.48
NEDD4L-203ENST00000357895 CFAP53Q96M91 514 aa12.02□□□□□ -0.49
NEDD4L-203ENST00000357895 MCM4P33991 863 aa12.02□□□□□ -0.49
NEDD4L-203ENST00000357895 PRDM15P57071 1507 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-203ENST00000357895 ASXL1Q8IXJ9 1541 aa12.01□□□□□ -0.49
NEDD4L-203ENST00000357895 WDR7Q9Y4E6 1490 aa12.01□□□□□ -0.49
NEDD4L-203ENST00000357895 RARSP54136 660 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-203ENST00000357895 NGEFQ8N5V2 710 aa12.01□□□□□ -0.49
NEDD4L-203ENST00000357895 TRIM44Q96DX7 344 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-203ENST00000357895 TBC1D32Q96NH3 1257 aa12.01□□□□□ -0.49
NEDD4L-203ENST00000357895 C22orf23Q9BZE7 217 aa12.01□□□□□ -0.49
NEDD4L-203ENST00000357895 CDC42BPAQ5VT25 1732 aa12.01□□□□□ -0.49
NEDD4L-203ENST00000357895 U2AF1L5P0DN76 240 aaPredicted RBP12□□□□□ -0.49
NEDD4L-203ENST00000357895 RLBP1P12271 317 aa12□□□□□ -0.49
NEDD4L-203ENST00000357895 U2AF1Q01081 240 aaKnown RBP eCLIP12□□□□□ -0.495e-7■■■■□ 23
NEDD4L-203ENST00000357895 PANK2Q9BZ23 570 aa12□□□□□ -0.49
NEDD4L-203ENST00000357895 PIK3C2GO75747 1445 aa12□□□□□ -0.49
NEDD4L-203ENST00000357895 TRAK2O60296 914 aa12□□□□□ -0.49
NEDD4L-203ENST00000357895 RUNDC1Q96C34 613 aa12□□□□□ -0.49
NEDD4L-203ENST00000357895 CHMP5Q9NZZ3 219 aa12□□□□□ -0.49
NEDD4L-203ENST00000357895 NUP160Q12769 1436 aa12□□□□□ -0.49
NEDD4L-203ENST00000357895 ITPRIPQ8IWB1 547 aa12□□□□□ -0.49
NEDD4L-203ENST00000357895 SENP3Q9H4L4 574 aaPredicted RBP12□□□□□ -0.49
NEDD4L-203ENST00000357895 XRCC6P12956 609 aaKnown RBP eCLIP11.99□□□□□ -0.49
NEDD4L-203ENST00000357895 EFCAB2Q5VUJ9 269 aa11.99□□□□□ -0.49
NEDD4L-203ENST00000357895 SYCP2Q9BX26 1530 aa11.99□□□□□ -0.49
NEDD4L-203ENST00000357895 ADCY10Q96PN6 1610 aa11.99□□□□□ -0.49
NEDD4L-203ENST00000357895 MYH16Q9H6N6 1097 aa11.99□□□□□ -0.49
NEDD4L-203ENST00000357895 SMC4Q9NTJ3 1288 aa11.99□□□□□ -0.49
NEDD4L-203ENST00000357895 EIF2AK4Q9P2K8 1649 aaKnown RBP11.99□□□□□ -0.49
NEDD4L-203ENST00000357895 NINLQ9Y2I6 1382 aa11.98□□□□□ -0.49
NEDD4L-203ENST00000357895 U2SURPO15042 1029 aaKnown RBP11.98□□□□□ -0.49
NEDD4L-203ENST00000357895 HSP90AB1P08238 724 aaKnown RBP11.98□□□□□ -0.49
NEDD4L-203ENST00000357895 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
NEDD4L-203ENST00000357895 ZKSCAN2Q63HK3 967 aa11.98□□□□□ -0.49
NEDD4L-203ENST00000357895 TRAK1Q9UPV9 953 aa11.98□□□□□ -0.49
NEDD4L-203ENST00000357895 SCAF11Q99590 1463 aaKnown RBP11.98□□□□□ -0.49
NEDD4L-203ENST00000357895 SPAG9O60271 1321 aaKnown RBP11.98□□□□□ -0.49
NEDD4L-203ENST00000357895 CARD14Q9BXL6 1004 aa11.98□□□□□ -0.49
NEDD4L-203ENST00000357895 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
NEDD4L-203ENST00000357895 DZIP1LQ8IYY4 767 aaKnown RBP11.97□□□□□ -0.49
NEDD4L-203ENST00000357895 KIF3BO15066 747 aa11.97□□□□□ -0.49
NEDD4L-203ENST00000357895 MTHFSP49914 203 aa11.97□□□□□ -0.49
NEDD4L-203ENST00000357895 ANTXR1Q9H6X2 564 aa11.96□□□□□ -0.49
NEDD4L-203ENST00000357895 SLC12A5Q9H2X9 1139 aa11.96□□□□□ -0.5
NEDD4L-203ENST00000357895 ARHGEF5Q12774 1597 aa11.96□□□□□ -0.5
NEDD4L-203ENST00000357895 AFAP1Q8N556 730 aa11.95□□□□□ -0.5
NEDD4L-203ENST00000357895 TSR2Q969E8 191 aaKnown RBP11.95□□□□□ -0.5
NEDD4L-203ENST00000357895 MRE11P49959 708 aa11.95□□□□□ -0.5
NEDD4L-203ENST00000357895 AAMPQ13685 434 aa11.95□□□□□ -0.5
NEDD4L-203ENST00000357895 MVPQ14764 893 aaKnown RBP11.95□□□□□ -0.5
NEDD4L-203ENST00000357895 SAMD9LQ8IVG5 1584 aa11.94□□□□□ -0.5
NEDD4L-203ENST00000357895 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
NEDD4L-203ENST00000357895 HSP90AA2PQ14568 343 aaPredicted RBP11.94□□□□□ -0.5
NEDD4L-203ENST00000357895 KANK1Q14678 1352 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms