RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RIMS2Q9UQ26 1411 aa36.66■■■■□ 3.46
SSBP3-202ENST00000357475 THEMISQ8N1K5 641 aaPredicted RBP36.66■■■■□ 3.46
SSBP3-202ENST00000357475 SLIT1O75093 1534 aa36.66■■■■□ 3.46
SSBP3-202ENST00000357475 ARHGAP23Q9P227 1491 aa36.66■■■■□ 3.46
SSBP3-202ENST00000357475 KDM2AQ9Y2K7 1162 aa36.64■■■■□ 3.46
SSBP3-202ENST00000357475 HSPA2P54652 639 aa36.62■■■■□ 3.45
SSBP3-202ENST00000357475 RPGRIP1LQ68CZ1 1315 aa36.61■■■■□ 3.45
SSBP3-202ENST00000357475 LTKP29376 864 aa36.59■■■■□ 3.45
SSBP3-202ENST00000357475 SENP3Q9H4L4 574 aaPredicted RBP36.58■■■■□ 3.45
SSBP3-202ENST00000357475 ADGRF5Q8IZF2 1346 aa36.57■■■■□ 3.45
SSBP3-202ENST00000357475 TIMELESSQ9UNS1 1208 aa36.57■■■■□ 3.44
SSBP3-202ENST00000357475 MYOM2P54296 1465 aa36.57■■■■□ 3.44
SSBP3-202ENST00000357475 TXNDC2Q86VQ3 553 aa36.53■■■■□ 3.44
SSBP3-202ENST00000357475 POLR1AO95602 1720 aaPredicted RBP36.52■■■■□ 3.44
SSBP3-202ENST00000357475 SCAF11Q99590 1463 aaKnown RBP36.51■■■■□ 3.44
SSBP3-202ENST00000357475 NRXN1Q9ULB1 1477 aa36.51■■■■□ 3.44
SSBP3-202ENST00000357475 PPP1R15AO75807 674 aaPredicted RBP36.5■■■■□ 3.43
SSBP3-202ENST00000357475 NBPF8Q3BBV2 869 aa36.49■■■■□ 3.43
SSBP3-202ENST00000357475 PRAG1Q86YV5 1406 aa36.48■■■■□ 3.43
SSBP3-202ENST00000357475 VGFO15240 615 aaPredicted RBP36.48■■■■□ 3.43
SSBP3-202ENST00000357475 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.48■■■■□ 3.43
SSBP3-202ENST00000357475 EID1Q9Y6B2 187 aa36.47■■■■□ 3.43
SSBP3-202ENST00000357475 AEBP2Q6ZN18 517 aaPredicted RBP36.46■■■■□ 3.43
SSBP3-202ENST00000357475 NCKAP5LQ9HCH0 1330 aa36.46■■■■□ 3.43
SSBP3-202ENST00000357475 NRXN3Q9Y4C0 1643 aa36.46■■■■□ 3.43
SSBP3-202ENST00000357475 IQGAP1P46940 1657 aa36.46■■■■□ 3.43
SSBP3-202ENST00000357475 STRCQ7RTU9 1775 aa36.45■■■■□ 3.43
SSBP3-202ENST00000357475 PIK3C2GO75747 1445 aa36.45■■■■□ 3.43
SSBP3-202ENST00000357475 ANKLE2Q86XL3 938 aa36.44■■■■□ 3.42
SSBP3-202ENST00000357475 HDGFP51858 240 aaKnown RBP36.43■■■■□ 3.42
SSBP3-202ENST00000357475 PLEKHG1Q9ULL1 1385 aa36.41■■■■□ 3.42
SSBP3-202ENST00000357475 STAC3Q96MF2 364 aa36.4■■■■□ 3.42
SSBP3-202ENST00000357475 TRPM1Q7Z4N2 1603 aa36.39■■■■□ 3.42
SSBP3-202ENST00000357475 SETBP1Q9Y6X0 1596 aa36.39■■■■□ 3.42
SSBP3-202ENST00000357475 ZEB1P37275 1124 aaPredicted RBP36.37■■■■□ 3.41
SSBP3-202ENST00000357475 SETD1AO15047 1707 aaKnown RBP36.37■■■■□ 3.41
SSBP3-202ENST00000357475 ALKQ9UM73 1620 aa36.35■■■■□ 3.41
SSBP3-202ENST00000357475 MED14O60244 1454 aa36.34■■■■□ 3.41
SSBP3-202ENST00000357475 CFAP70Q5T0N1 1121 aa36.34■■■■□ 3.41
SSBP3-202ENST00000357475 ADAMTS13Q76LX8 1427 aa36.34■■■■□ 3.41
SSBP3-202ENST00000357475 NPHP4O75161 1426 aaPredicted RBP36.33■■■■□ 3.41
SSBP3-202ENST00000357475 BCANQ96GW7 911 aa36.33■■■■□ 3.41
SSBP3-202ENST00000357475 KIAA1210Q9ULL0 1709 aa36.32■■■■□ 3.4
SSBP3-202ENST00000357475 NBPF1Q3BBV0 1214 aa36.29■■■■□ 3.4
SSBP3-202ENST00000357475 SLC26A8Q96RN1 970 aa36.29■■■■□ 3.4
SSBP3-202ENST00000357475 C14orf93Q9H972 538 aaKnown RBP36.29■■■■□ 3.4
SSBP3-202ENST00000357475 LAMC1P11047 1609 aa36.29■■■■□ 3.4
SSBP3-202ENST00000357475 ASXL1Q8IXJ9 1541 aa36.28■■■■□ 3.4
SSBP3-202ENST00000357475 RALGAPBQ86X10 1494 aa36.27■■■■□ 3.4
SSBP3-202ENST00000357475 ADGRB1O14514 1584 aa36.23■■■■□ 3.39
SSBP3-202ENST00000357475 TMEM132EQ6IEE7 984 aa36.23■■■■□ 3.39
SSBP3-202ENST00000357475 METP08581 1390 aa36.22■■■■□ 3.39
SSBP3-202ENST00000357475 DIP2AQ14689 1571 aa36.2■■■■□ 3.39
SSBP3-202ENST00000357475 ROCK2O75116 1388 aaKnown RBP36.19■■■■□ 3.38
SSBP3-202ENST00000357475 TBX22Q9Y458 520 aa36.16■■■■□ 3.38
SSBP3-202ENST00000357475 GPRASP1Q5JY77 1395 aa36.13■■■■□ 3.38
SSBP3-202ENST00000357475 PTPRUQ92729 1446 aa36.12■■■■□ 3.37
SSBP3-202ENST00000357475 CARD11Q9BXL7 1154 aa36.09■■■■□ 3.37
SSBP3-202ENST00000357475 CHD2O14647 1828 aaKnown RBP36.09■■■■□ 3.37
SSBP3-202ENST00000357475 YTHDC2Q9H6S0 1430 aaKnown RBP36.07■■■■□ 3.36
SSBP3-202ENST00000357475 STK26Q9P289 416 aa36.07■■■■□ 3.36
SSBP3-202ENST00000357475 STRCP1A6NGW2 1772 aa36.04■■■■□ 3.36
SSBP3-202ENST00000357475 XRN1Q8IZH2 1706 aaKnown RBP36.03■■■■□ 3.36
SSBP3-202ENST00000357475 LRPPRCP42704 1394 aaKnown RBP36.02■■■■□ 3.36
SSBP3-202ENST00000357475 TRAK1Q9UPV9 953 aa36.02■■■■□ 3.36
SSBP3-202ENST00000357475 KNDC1Q76NI1 1749 aa36.01■■■■□ 3.36
SSBP3-202ENST00000357475 ARHGEF28Q8N1W1 1705 aaKnown RBP36.01■■■■□ 3.36
SSBP3-202ENST00000357475 PIK3R4Q99570 1358 aa36■■■■□ 3.35
SSBP3-202ENST00000357475 AMOTL2Q9Y2J4 779 aa35.98■■■■□ 3.35
SSBP3-202ENST00000357475 NWD1Q149M9 1564 aa35.98■■■■□ 3.35
SSBP3-202ENST00000357475 DMRT2Q9Y5R5 561 aa35.98■■■■□ 3.35
SSBP3-202ENST00000357475 USP47Q96K76 1375 aa35.96■■■■□ 3.35
SSBP3-202ENST00000357475 KCNA6P17658 529 aa35.95■■■■□ 3.35
SSBP3-202ENST00000357475 ABCC11Q96J66 1382 aa35.95■■■■□ 3.35
SSBP3-202ENST00000357475 CPS1P31327 1500 aa35.94■■■■□ 3.34
SSBP3-202ENST00000357475 TECPR2O15040 1411 aa35.94■■■■□ 3.34
SSBP3-202ENST00000357475 ROBO2Q9HCK4 1378 aa35.93■■■■□ 3.34
SSBP3-202ENST00000357475 ZNF335Q9H4Z2 1342 aaPredicted RBP35.92■■■■□ 3.34
SSBP3-202ENST00000357475 DLC1Q96QB1 1528 aa35.91■■■■□ 3.34
SSBP3-202ENST00000357475 PLEKHH1Q9ULM0 1364 aa35.89■■■■□ 3.34
SSBP3-202ENST00000357475 HIRIP3Q9BW71 556 aaPredicted RBP35.89■■■■□ 3.34
SSBP3-202ENST00000357475 HSPA5P11021 654 aaKnown RBP35.88■■■■□ 3.33
SSBP3-202ENST00000357475 WAPLQ7Z5K2 1190 aa35.88■■■■□ 3.33
SSBP3-202ENST00000357475 PRAM1Q96QH2 718 aa35.86■■■■□ 3.33
SSBP3-202ENST00000357475 QRICH2Q9H0J4 1663 aa35.86■■■■□ 3.33
SSBP3-202ENST00000357475 PTCH1Q13635 1447 aa35.85■■■■□ 3.33
SSBP3-202ENST00000357475 ST20-MTHFSA0A0A6YYL1 179 aa35.84■■■■□ 3.33
SSBP3-202ENST00000357475 EIF4G2P78344 907 aaKnown RBP eCLIP35.84■■■■□ 3.338e-7■■■■□ 25.5
SSBP3-202ENST00000357475 SAFB2Q14151 953 aaKnown RBP eCLIP35.83■■■■□ 3.33
SSBP3-202ENST00000357475 RBM33Q96EV2 1170 aaKnown RBP35.83■■■■□ 3.33
SSBP3-202ENST00000357475 NKTRP30414 1462 aaKnown RBP35.81■■■■□ 3.32
SSBP3-202ENST00000357475 FAM135BQ49AJ0 1406 aa35.81■■■■□ 3.32
SSBP3-202ENST00000357475 EIF3AQ14152 1382 aaKnown RBP35.81■■■■□ 3.32
SSBP3-202ENST00000357475 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.79■■■■□ 3.32
SSBP3-202ENST00000357475 CENPJQ9HC77 1338 aaPredicted RBP35.78■■■■□ 3.32
SSBP3-202ENST00000357475 SIRT1Q96EB6 747 aa35.78■■■■□ 3.32
SSBP3-202ENST00000357475 POGKQ9P215 609 aa35.78■■■■□ 3.32
SSBP3-202ENST00000357475 XIRP1Q702N8 1843 aaKnown RBP35.76■■■■□ 3.31
SSBP3-202ENST00000357475 TESK2Q96S53 571 aa35.74■■■■□ 3.31
SSBP3-202ENST00000357475 LTBP4Q8N2S1 1624 aa35.74■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms