RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ANKRD20A12PQ8NF67 263 aa14.01□□□□□ -0.17
SPTBN1-202ENST00000356805 ANKRD45Q5TZF3 282 aa14.01□□□□□ -0.17
SPTBN1-202ENST00000356805 FOSBP53539 338 aa14□□□□□ -0.17
SPTBN1-202ENST00000356805 TERF2IPQ9NYB0 399 aa14□□□□□ -0.17
SPTBN1-202ENST00000356805 NUCB2P80303 420 aa14□□□□□ -0.17
SPTBN1-202ENST00000356805 PKD2Q13563 968 aa14□□□□□ -0.17
SPTBN1-202ENST00000356805 RAB3GAP2Q9H2M9 1393 aa14□□□□□ -0.17
SPTBN1-202ENST00000356805 C1orf141Q5JVX7 400 aa14□□□□□ -0.17
SPTBN1-202ENST00000356805 CCDC47Q96A33 483 aaKnown RBP14□□□□□ -0.17
SPTBN1-202ENST00000356805 CCDC39Q9UFE4 941 aa14□□□□□ -0.17
SPTBN1-202ENST00000356805 EID1Q9Y6B2 187 aa13.99□□□□□ -0.17
SPTBN1-202ENST00000356805 ZFYVE27Q5T4F4 411 aa13.99□□□□□ -0.17
SPTBN1-202ENST00000356805 FMN1Q68DA7 1419 aa13.99□□□□□ -0.17
SPTBN1-202ENST00000356805 LMOD3Q0VAK6 560 aa13.99□□□□□ -0.17
SPTBN1-202ENST00000356805 RRP1P56182 461 aaKnown RBP13.99□□□□□ -0.17
SPTBN1-202ENST00000356805 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.98□□□□□ -0.17
SPTBN1-202ENST00000356805 RRP7AQ9Y3A4 280 aaKnown RBP13.98□□□□□ -0.17
SPTBN1-202ENST00000356805 HOOK1Q9UJC3 728 aaKnown RBP13.98□□□□□ -0.17
SPTBN1-202ENST00000356805 EPS15P42566 896 aa13.98□□□□□ -0.17
SPTBN1-202ENST00000356805 AK7Q96M32 723 aa13.98□□□□□ -0.17
SPTBN1-202ENST00000356805 SYTL4Q96C24 671 aaPredicted RBP13.98□□□□□ -0.17
SPTBN1-202ENST00000356805 MEX3CQ5U5Q3 659 aaKnown RBP13.97□□□□□ -0.17
SPTBN1-202ENST00000356805 NFXL1Q6ZNB6 911 aa13.97□□□□□ -0.17
SPTBN1-202ENST00000356805 PRKCSHP14314 528 aaPredicted RBP13.97□□□□□ -0.17
SPTBN1-202ENST00000356805 HSP90AB2PQ58FF8 381 aa13.97□□□□□ -0.17
SPTBN1-202ENST00000356805 ANO2Q9NQ90 1003 aa13.97□□□□□ -0.17
SPTBN1-202ENST00000356805 MYBBP1AQ9BQG0 1328 aaKnown RBP13.97□□□□□ -0.17
SPTBN1-202ENST00000356805 CDR1P51861 262 aa13.97□□□□□ -0.17
SPTBN1-202ENST00000356805 REC8O95072 547 aa13.97□□□□□ -0.17
SPTBN1-202ENST00000356805 BAZ1BQ9UIG0 1483 aaKnown RBP13.97□□□□□ -0.17
SPTBN1-202ENST00000356805 DHX8Q14562 1220 aaKnown RBP13.97□□□□□ -0.17
SPTBN1-202ENST00000356805 PODXL2Q9NZ53 605 aa13.96□□□□□ -0.17
SPTBN1-202ENST00000356805 LRRFIP1Q32MZ4 808 aaKnown RBP13.96□□□□□ -0.17
SPTBN1-202ENST00000356805 HSP90B2PQ58FF3 399 aa13.96□□□□□ -0.17
SPTBN1-202ENST00000356805 NFKBIBQ15653 356 aa13.95□□□□□ -0.18
SPTBN1-202ENST00000356805 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
SPTBN1-202ENST00000356805 ELL2O00472 640 aaPredicted RBP13.95□□□□□ -0.18
SPTBN1-202ENST00000356805 CPLX1O14810 134 aa13.95□□□□□ -0.18
SPTBN1-202ENST00000356805 SKIDA1Q1XH10 827 aa13.95□□□□□ -0.18
SPTBN1-202ENST00000356805 C9orf78Q9NZ63 289 aaPredicted RBP13.95□□□□□ -0.18
SPTBN1-202ENST00000356805 CPLX2Q6PUV4 134 aaKnown RBP13.94□□□□□ -0.18
SPTBN1-202ENST00000356805 ERICH2A1L162 156 aa13.94□□□□□ -0.18
SPTBN1-202ENST00000356805 BICD2Q8TD16 824 aa13.94□□□□□ -0.18
SPTBN1-202ENST00000356805 BCL2L13Q9BXK5 485 aa13.94□□□□□ -0.18
SPTBN1-202ENST00000356805 EIF2S2P20042 333 aaKnown RBP13.94□□□□□ -0.18
SPTBN1-202ENST00000356805 SLC4A3P48751 1232 aa13.93□□□□□ -0.18
SPTBN1-202ENST00000356805 NASPP49321 788 aaPredicted RBP13.93□□□□□ -0.18
SPTBN1-202ENST00000356805 FYB1O15117 783 aa13.93□□□□□ -0.18
SPTBN1-202ENST00000356805 R3HCC1Q9Y3T6 440 aaKnown RBP13.93□□□□□ -0.18
SPTBN1-202ENST00000356805 E9PSI1 815 aa13.92□□□□□ -0.18
SPTBN1-202ENST00000356805 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
SPTBN1-202ENST00000356805 CCDC173Q0VFZ6 552 aa13.92□□□□□ -0.18
SPTBN1-202ENST00000356805 TRDNQ13061 729 aa13.92□□□□□ -0.18
SPTBN1-202ENST00000356805 PAF1Q8N7H5 531 aa13.92□□□□□ -0.18
SPTBN1-202ENST00000356805 NEXNQ0ZGT2 675 aa13.91□□□□□ -0.18
SPTBN1-202ENST00000356805 ERCC4Q92889 916 aaPredicted RBP13.91□□□□□ -0.18
SPTBN1-202ENST00000356805 LETM1O95202 739 aaPredicted RBP13.91□□□□□ -0.18
SPTBN1-202ENST00000356805 BAZ1AQ9NRL2 1556 aaPredicted RBP13.91□□□□□ -0.18
SPTBN1-202ENST00000356805 TTLL5Q6EMB2 1281 aa13.9□□□□□ -0.18
SPTBN1-202ENST00000356805 CAVIN1Q6NZI2 390 aaKnown RBP13.9□□□□□ -0.18
SPTBN1-202ENST00000356805 TSPYL1Q9H0U9 437 aa13.9□□□□□ -0.18
SPTBN1-202ENST00000356805 TMEM132AQ24JP5 1023 aa13.9□□□□□ -0.18
SPTBN1-202ENST00000356805 MBD3O95983 291 aa13.9□□□□□ -0.18
SPTBN1-202ENST00000356805 MTMR7Q9Y216 660 aa13.9□□□□□ -0.18
SPTBN1-202ENST00000356805 CAGE1Q8TC20 777 aa13.89□□□□□ -0.19
SPTBN1-202ENST00000356805 RUFY2Q8WXA3 655 aa13.89□□□□□ -0.19
SPTBN1-202ENST00000356805 KDM4AO75164 1064 aa13.89□□□□□ -0.19
SPTBN1-202ENST00000356805 SASS6Q6UVJ0 657 aa13.89□□□□□ -0.19
SPTBN1-202ENST00000356805 CCP110O43303 1012 aa13.89□□□□□ -0.19
SPTBN1-202ENST00000356805 IFIT2P09913 472 aaKnown RBP13.89□□□□□ -0.19
SPTBN1-202ENST00000356805 DCTN1Q14203 1278 aa13.89□□□□□ -0.19
SPTBN1-202ENST00000356805 NUP155O75694 1391 aa13.89□□□□□ -0.19
SPTBN1-202ENST00000356805 ZKSCAN1P17029 563 aaPredicted RBP13.89□□□□□ -0.19
SPTBN1-202ENST00000356805 PHF23Q9BUL5 403 aaPredicted RBP13.89□□□□□ -0.19
SPTBN1-202ENST00000356805 PRKRIP1Q9H875 184 aaPredicted RBP13.88□□□□□ -0.19
SPTBN1-202ENST00000356805 RDXP35241 583 aaKnown RBP13.88□□□□□ -0.19
SPTBN1-202ENST00000356805 PDILTQ8N807 584 aa13.88□□□□□ -0.19
SPTBN1-202ENST00000356805 MNS1Q8NEH6 495 aa13.88□□□□□ -0.19
SPTBN1-202ENST00000356805 IFT57Q9NWB7 429 aa13.88□□□□□ -0.19
SPTBN1-202ENST00000356805 USP8P40818 1118 aa13.87□□□□□ -0.19
SPTBN1-202ENST00000356805 TEFQ10587 303 aa13.87□□□□□ -0.19
SPTBN1-202ENST00000356805 CCDC27Q2M243 656 aa13.87□□□□□ -0.19
SPTBN1-202ENST00000356805 CCDC191Q8NCU4 936 aa13.87□□□□□ -0.19
SPTBN1-202ENST00000356805 RBM33Q96EV2 1170 aaKnown RBP13.87□□□□□ -0.19
SPTBN1-202ENST00000356805 PLCD4Q9BRC7 762 aa13.87□□□□□ -0.19
SPTBN1-202ENST00000356805 IKQ13123 557 aaPredicted RBP13.86□□□□□ -0.19
SPTBN1-202ENST00000356805 PDCL2Q8N4E4 241 aa13.86□□□□□ -0.19
SPTBN1-202ENST00000356805 VPS37CA5D8V6 355 aaPredicted RBP13.86□□□□□ -0.19
SPTBN1-202ENST00000356805 PLIN1O60240 522 aa13.86□□□□□ -0.19
SPTBN1-202ENST00000356805 OFD1O75665 1012 aa13.86□□□□□ -0.19
SPTBN1-202ENST00000356805 TRAK1Q9UPV9 953 aa13.86□□□□□ -0.19
SPTBN1-202ENST00000356805 ZKSCAN2Q63HK3 967 aa13.85□□□□□ -0.19
SPTBN1-202ENST00000356805 DDX19BQ9UMR2 479 aa13.85□□□□□ -0.19
SPTBN1-202ENST00000356805 KAT6BQ8WYB5 2073 aa13.85□□□□□ -0.19
SPTBN1-202ENST00000356805 WWC2Q6AWC2 1192 aa13.85□□□□□ -0.19
SPTBN1-202ENST00000356805 NAT10Q9H0A0 1025 aaKnown RBP13.85□□□□□ -0.19
SPTBN1-202ENST00000356805 SAFBQ15424 915 aaKnown RBP eCLIP13.85□□□□□ -0.19
SPTBN1-202ENST00000356805 WASHC2CQ9Y4E1 1318 aa13.84□□□□□ -0.19
SPTBN1-202ENST00000356805 KIF3BO15066 747 aa13.84□□□□□ -0.19
SPTBN1-202ENST00000356805 MPHOSPH9Q99550 1183 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms