RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 TRAK1Q9UPV9 953 aa20.64■□□□□ 0.89
C2CD4A-201ENST00000355522 TRAK2O60296 914 aa20.63■□□□□ 0.89
C2CD4A-201ENST00000355522 TMEM132EQ6IEE7 984 aa20.63■□□□□ 0.89
C2CD4A-201ENST00000355522 PLEKHH2Q8IVE3 1493 aa20.63■□□□□ 0.89
C2CD4A-201ENST00000355522 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
C2CD4A-201ENST00000355522 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
C2CD4A-201ENST00000355522 TBC1D2Q9BYX2 928 aa20.62■□□□□ 0.89
C2CD4A-201ENST00000355522 PLEKHH1Q9ULM0 1364 aa20.61■□□□□ 0.89
C2CD4A-201ENST00000355522 PARD3Q8TEW0 1356 aa20.6■□□□□ 0.89
C2CD4A-201ENST00000355522 MCM4P33991 863 aa20.6■□□□□ 0.89
C2CD4A-201ENST00000355522 TNNQ9UQP3 1299 aa20.6■□□□□ 0.89
C2CD4A-201ENST00000355522 MAPK8IP3Q9UPT6 1336 aa20.6■□□□□ 0.89
C2CD4A-201ENST00000355522 CENPJQ9HC77 1338 aaPredicted RBP20.6■□□□□ 0.89
C2CD4A-201ENST00000355522 GGT6Q6P531 493 aa20.6■□□□□ 0.89
C2CD4A-201ENST00000355522 ANP32BQ92688 251 aaKnown RBP20.58■□□□□ 0.89
C2CD4A-201ENST00000355522 ZBTB7CA1YPR0 619 aa20.58■□□□□ 0.88
C2CD4A-201ENST00000355522 HSCBQ8IWL3 235 aa20.58■□□□□ 0.88
C2CD4A-201ENST00000355522 NCLP19338 710 aaKnown RBP20.57■□□□□ 0.88
C2CD4A-201ENST00000355522 SLFN5Q08AF3 891 aa20.57■□□□□ 0.88
C2CD4A-201ENST00000355522 STK26Q9P289 416 aa20.56■□□□□ 0.88
C2CD4A-201ENST00000355522 ESPNB1AK53 854 aa20.55■□□□□ 0.88
C2CD4A-201ENST00000355522 KDM5CP41229 1560 aa20.55■□□□□ 0.88
C2CD4A-201ENST00000355522 CGNL1Q0VF96 1302 aa20.54■□□□□ 0.88
C2CD4A-201ENST00000355522 RRP9O43818 475 aaKnown RBP20.54■□□□□ 0.88
C2CD4A-201ENST00000355522 PDZRN3Q9UPQ7 1066 aa20.54■□□□□ 0.88
C2CD4A-201ENST00000355522 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
C2CD4A-201ENST00000355522 ARHGAP5Q13017 1502 aa20.54■□□□□ 0.88
C2CD4A-201ENST00000355522 EIF4G3O43432 1585 aaKnown RBP20.54■□□□□ 0.88
C2CD4A-201ENST00000355522 HSP90AB1P08238 724 aaKnown RBP20.53■□□□□ 0.88
C2CD4A-201ENST00000355522 RALGAPBQ86X10 1494 aa20.53■□□□□ 0.88
C2CD4A-201ENST00000355522 MRE11P49959 708 aa20.53■□□□□ 0.88
C2CD4A-201ENST00000355522 FTSJ3Q8IY81 847 aaKnown RBP20.53■□□□□ 0.88
C2CD4A-201ENST00000355522 ERBINQ96RT1 1412 aa20.53■□□□□ 0.88
C2CD4A-201ENST00000355522 CLCN1P35523 988 aa20.53■□□□□ 0.88
C2CD4A-201ENST00000355522 RBM10P98175 930 aaKnown RBP20.53■□□□□ 0.88
C2CD4A-201ENST00000355522 GRPEL1Q9HAV7 217 aa20.53■□□□□ 0.88
C2CD4A-201ENST00000355522 CHMP5Q9NZZ3 219 aa20.53■□□□□ 0.88
C2CD4A-201ENST00000355522 SLC12A5Q9H2X9 1139 aa20.52■□□□□ 0.88
C2CD4A-201ENST00000355522 SPAG9O60271 1321 aaKnown RBP20.52■□□□□ 0.87
C2CD4A-201ENST00000355522 E9PSI1 815 aa20.51■□□□□ 0.87
C2CD4A-201ENST00000355522 USP19O94966 1318 aa20.51■□□□□ 0.87
C2CD4A-201ENST00000355522 PRAG1Q86YV5 1406 aa20.5■□□□□ 0.87
C2CD4A-201ENST00000355522 MBD5Q9P267 1494 aa20.5■□□□□ 0.87
C2CD4A-201ENST00000355522 C22orf23Q9BZE7 217 aa20.5■□□□□ 0.87
C2CD4A-201ENST00000355522 PMFBP1Q8TBY8 1022 aa20.5■□□□□ 0.87
C2CD4A-201ENST00000355522 EFCAB2Q5VUJ9 269 aa20.49■□□□□ 0.87
C2CD4A-201ENST00000355522 RWDD1Q9H446 243 aaPredicted RBP20.48■□□□□ 0.87
C2CD4A-201ENST00000355522 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
C2CD4A-201ENST00000355522 SYNJ2O15056 1496 aa20.47■□□□□ 0.87
C2CD4A-201ENST00000355522 SYCP2Q9BX26 1530 aa20.47■□□□□ 0.87
C2CD4A-201ENST00000355522 FAM135AQ9P2D6 1515 aa20.46■□□□□ 0.87
C2CD4A-201ENST00000355522 FAM13BQ9NYF5 915 aa20.46■□□□□ 0.87
C2CD4A-201ENST00000355522 ADGRF5Q8IZF2 1346 aa20.46■□□□□ 0.87
C2CD4A-201ENST00000355522 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
C2CD4A-201ENST00000355522 A2MP01023 1474 aa20.46■□□□□ 0.87
C2CD4A-201ENST00000355522 MSNP26038 577 aaKnown RBP20.46■□□□□ 0.87
C2CD4A-201ENST00000355522 AMER1Q5JTC6 1135 aaPredicted RBP20.45■□□□□ 0.86
C2CD4A-201ENST00000355522 TBC1D32Q96NH3 1257 aa20.45■□□□□ 0.86
C2CD4A-201ENST00000355522 FBLN1P23142 703 aa20.45■□□□□ 0.86
C2CD4A-201ENST00000355522 PLA2R1Q13018 1463 aa20.44■□□□□ 0.86
C2CD4A-201ENST00000355522 PCDHB15Q9Y5E8 787 aa20.44■□□□□ 0.86
C2CD4A-201ENST00000355522 DDX11L8A8MPP1 907 aa20.43■□□□□ 0.86
C2CD4A-201ENST00000355522 KIAA1211Q6ZU35 1233 aa20.43■□□□□ 0.86
C2CD4A-201ENST00000355522 CARD14Q9BXL6 1004 aa20.43■□□□□ 0.86
C2CD4A-201ENST00000355522 ANTXR1Q9H6X2 564 aa20.42■□□□□ 0.86
C2CD4A-201ENST00000355522 CCDC141Q6ZP82 1450 aa20.41■□□□□ 0.86
C2CD4A-201ENST00000355522 U2AF1L5P0DN76 240 aaPredicted RBP20.41■□□□□ 0.86
C2CD4A-201ENST00000355522 U2AF1Q01081 240 aaKnown RBP eCLIP20.41■□□□□ 0.86
C2CD4A-201ENST00000355522 BLMP54132 1417 aaPredicted RBP20.4■□□□□ 0.86
C2CD4A-201ENST00000355522 PDE3AQ14432 1141 aa20.4■□□□□ 0.86
C2CD4A-201ENST00000355522 TSR2Q969E8 191 aaKnown RBP20.4■□□□□ 0.86
C2CD4A-201ENST00000355522 ITPRIPQ8IWB1 547 aa20.4■□□□□ 0.86
C2CD4A-201ENST00000355522 GBP4Q96PP9 640 aa20.4■□□□□ 0.86
C2CD4A-201ENST00000355522 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.86
C2CD4A-201ENST00000355522 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.86
C2CD4A-201ENST00000355522 ZMYM4Q5VZL5 1548 aa20.39■□□□□ 0.85
C2CD4A-201ENST00000355522 POLR1AO95602 1720 aaPredicted RBP20.39■□□□□ 0.85
C2CD4A-201ENST00000355522 CDCA8Q53HL2 280 aa20.39■□□□□ 0.85
C2CD4A-201ENST00000355522 GOLGA6L22H0YM25 854 aa20.38■□□□□ 0.85
C2CD4A-201ENST00000355522 EIF3AQ14152 1382 aaKnown RBP20.38■□□□□ 0.85
C2CD4A-201ENST00000355522 MAGI2Q86UL8 1455 aa20.38■□□□□ 0.85
C2CD4A-201ENST00000355522 RLBP1P12271 317 aa20.37■□□□□ 0.85
C2CD4A-201ENST00000355522 R3HCC1Q9Y3T6 440 aaKnown RBP20.37■□□□□ 0.85
C2CD4A-201ENST00000355522 NKTRP30414 1462 aaKnown RBP20.37■□□□□ 0.85
C2CD4A-201ENST00000355522 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
C2CD4A-201ENST00000355522 A0A0U1RQG5 324 aaPredicted RBP20.37■□□□□ 0.85
C2CD4A-201ENST00000355522 CABP2Q9NPB3 220 aa20.37■□□□□ 0.85
C2CD4A-201ENST00000355522 ABCC10Q5T3U5 1492 aa20.37■□□□□ 0.85
C2CD4A-201ENST00000355522 TRAPPC8Q9Y2L5 1435 aa20.36■□□□□ 0.85
C2CD4A-201ENST00000355522 TPRNQ4KMQ1 711 aa20.36■□□□□ 0.85
C2CD4A-201ENST00000355522 ADGRL2O95490 1459 aa20.36■□□□□ 0.85
C2CD4A-201ENST00000355522 ELL2O00472 640 aaPredicted RBP20.36■□□□□ 0.85
C2CD4A-201ENST00000355522 MTHFSP49914 203 aa20.36■□□□□ 0.85
C2CD4A-201ENST00000355522 DDX49Q9Y6V7 483 aaKnown RBP20.35■□□□□ 0.85
C2CD4A-201ENST00000355522 TCP11L2Q8N4U5 519 aa20.34■□□□□ 0.85
C2CD4A-201ENST00000355522 FSD2A1L4K1 749 aa20.34■□□□□ 0.85
C2CD4A-201ENST00000355522 SCAPERQ9BY12 1400 aa20.34■□□□□ 0.85
C2CD4A-201ENST00000355522 CFAP65Q6ZU64 1925 aaKnown RBP20.34■□□□□ 0.85
C2CD4A-201ENST00000355522 CDC42BPAQ5VT25 1732 aa20.34■□□□□ 0.85
C2CD4A-201ENST00000355522 WWC1Q8IX03 1113 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms