RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 RAD21O60216 631 aa18.14■□□□□ 0.49
LMX1B-201ENST00000355497 PLIN1O60240 522 aa18.14■□□□□ 0.49
LMX1B-201ENST00000355497 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.14■□□□□ 0.49
LMX1B-201ENST00000355497 RUFY1Q96T51 708 aa18.14■□□□□ 0.49
LMX1B-201ENST00000355497 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
LMX1B-201ENST00000355497 EXOC6Q8TAG9 804 aa18.14■□□□□ 0.49
LMX1B-201ENST00000355497 NEXNQ0ZGT2 675 aa18.14■□□□□ 0.49
LMX1B-201ENST00000355497 KRI1Q8N9T8 703 aaKnown RBP18.14■□□□□ 0.49
LMX1B-201ENST00000355497 FAM13BQ9NYF5 915 aa18.13■□□□□ 0.49
LMX1B-201ENST00000355497 ACBD3Q9H3P7 528 aa18.12■□□□□ 0.49
LMX1B-201ENST00000355497 PANK3Q9H999 370 aa18.12■□□□□ 0.49
LMX1B-201ENST00000355497 IFIT2P09913 472 aaKnown RBP18.12■□□□□ 0.49
LMX1B-201ENST00000355497 ARGLU1Q9NWB6 273 aaPredicted RBP18.12■□□□□ 0.49
LMX1B-201ENST00000355497 COG3Q96JB2 828 aa18.11■□□□□ 0.49
LMX1B-201ENST00000355497 RNF20Q5VTR2 975 aa18.11■□□□□ 0.49
LMX1B-201ENST00000355497 SASS6Q6UVJ0 657 aa18.11■□□□□ 0.49
LMX1B-201ENST00000355497 TRAK1Q9UPV9 953 aa18.11■□□□□ 0.49
LMX1B-201ENST00000355497 CHMP5Q9NZZ3 219 aa18.11■□□□□ 0.49
LMX1B-201ENST00000355497 COG6Q9Y2V7 657 aa18.11■□□□□ 0.49
LMX1B-201ENST00000355497 C9orf78Q9NZ63 289 aaPredicted RBP18.11■□□□□ 0.49
LMX1B-201ENST00000355497 WASHC2CQ9Y4E1 1318 aa18.11■□□□□ 0.49
LMX1B-201ENST00000355497 APPP05067 770 aa18.11■□□□□ 0.49
LMX1B-201ENST00000355497 DDX19BQ9UMR2 479 aa18.1■□□□□ 0.49
LMX1B-201ENST00000355497 NOM1Q5C9Z4 860 aaKnown RBP18.1■□□□□ 0.49
LMX1B-201ENST00000355497 NUTM2FA1L443 756 aa18.1■□□□□ 0.49
LMX1B-201ENST00000355497 DHX16O60231 1041 aaKnown RBP18.1■□□□□ 0.49
LMX1B-201ENST00000355497 TRDNQ13061 729 aa18.09■□□□□ 0.49
LMX1B-201ENST00000355497 TTC5Q8N0Z6 440 aa18.09■□□□□ 0.49
LMX1B-201ENST00000355497 BAZ1AQ9NRL2 1556 aaPredicted RBP18.09■□□□□ 0.49
LMX1B-201ENST00000355497 HNRNPMP52272 730 aaKnown RBP eCLIP18.09■□□□□ 0.49
LMX1B-201ENST00000355497 TEFQ10587 303 aa18.09■□□□□ 0.49
LMX1B-201ENST00000355497 MNS1Q8NEH6 495 aa18.09■□□□□ 0.49
LMX1B-201ENST00000355497 NFXL1Q6ZNB6 911 aa18.09■□□□□ 0.49
LMX1B-201ENST00000355497 ROCK1Q13464 1354 aa18.08■□□□□ 0.48
LMX1B-201ENST00000355497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.08■□□□□ 0.48
LMX1B-201ENST00000355497 NAP1L1P55209 391 aaKnown RBP18.08■□□□□ 0.48
LMX1B-201ENST00000355497 ERICH2A1L162 156 aa18.07■□□□□ 0.48
LMX1B-201ENST00000355497 SMC3Q9UQE7 1217 aa18.07■□□□□ 0.48
LMX1B-201ENST00000355497 NACADO15069 1562 aa18.07■□□□□ 0.48
LMX1B-201ENST00000355497 IFT57Q9NWB7 429 aa18.07■□□□□ 0.48
LMX1B-201ENST00000355497 VPS37CA5D8V6 355 aaPredicted RBP18.06■□□□□ 0.48
LMX1B-201ENST00000355497 EIF2S2P20042 333 aaKnown RBP18.06■□□□□ 0.48
LMX1B-201ENST00000355497 NGEFQ8N5V2 710 aa18.06■□□□□ 0.48
LMX1B-201ENST00000355497 FBXW7Q969H0 707 aa18.06■□□□□ 0.48
LMX1B-201ENST00000355497 UACAQ9BZF9 1416 aa18.06■□□□□ 0.48
LMX1B-201ENST00000355497 NUCB2P80303 420 aa18.06■□□□□ 0.48
LMX1B-201ENST00000355497 FAM43AQ8N2R8 423 aa18.06■□□□□ 0.48
LMX1B-201ENST00000355497 ZBED9Q6R2W3 1325 aa18.05■□□□□ 0.48
LMX1B-201ENST00000355497 CCDC43Q96MW1 224 aaKnown RBP18.05■□□□□ 0.48
LMX1B-201ENST00000355497 CCDC73Q6ZRK6 1079 aa18.05■□□□□ 0.48
LMX1B-201ENST00000355497 API5Q9BZZ5 524 aaKnown RBP18.05■□□□□ 0.48
LMX1B-201ENST00000355497 RSPH4AQ5TD94 716 aa18.05■□□□□ 0.48
LMX1B-201ENST00000355497 INTS3Q68E01 1043 aaKnown RBP18.05■□□□□ 0.48
LMX1B-201ENST00000355497 HSP90B2PQ58FF3 399 aa18.04■□□□□ 0.48
LMX1B-201ENST00000355497 CT47A1Q5JQC4 288 aaPredicted RBP18.04■□□□□ 0.48
LMX1B-201ENST00000355497 VPS37DQ86XT2 251 aa18.04■□□□□ 0.48
LMX1B-201ENST00000355497 EVC2Q86UK5 1308 aa18.04■□□□□ 0.48
LMX1B-201ENST00000355497 ST20-MTHFSA0A0A6YYL1 179 aa18.04■□□□□ 0.48
LMX1B-201ENST00000355497 G3BP1Q13283 466 aaKnown RBP eCLIP18.03■□□□□ 0.48
LMX1B-201ENST00000355497 EVA1CP58658 441 aa18.03■□□□□ 0.48
LMX1B-201ENST00000355497 SAFBQ15424 915 aaKnown RBP eCLIP18.03■□□□□ 0.48
LMX1B-201ENST00000355497 CCDC144AA2RUR9 1427 aa18.03■□□□□ 0.48
LMX1B-201ENST00000355497 FANCIQ9NVI1 1328 aa18.03■□□□□ 0.48
LMX1B-201ENST00000355497 DZIP1LQ8IYY4 767 aaKnown RBP18.03■□□□□ 0.48
LMX1B-201ENST00000355497 DDX58O95786 925 aaKnown RBP18.03■□□□□ 0.48
LMX1B-201ENST00000355497 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
LMX1B-201ENST00000355497 ODF2Q5BJF6 829 aa18.02■□□□□ 0.47
LMX1B-201ENST00000355497 CCDC18Q5T9S5 1454 aa18.01■□□□□ 0.47
LMX1B-201ENST00000355497 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.01■□□□□ 0.47
LMX1B-201ENST00000355497 MSH5O43196 834 aa18.01■□□□□ 0.47
LMX1B-201ENST00000355497 FOSBP53539 338 aa18.01■□□□□ 0.47
LMX1B-201ENST00000355497 OLFM4Q6UX06 510 aa18.01■□□□□ 0.47
LMX1B-201ENST00000355497 CCDC39Q9UFE4 941 aa18.01■□□□□ 0.47
LMX1B-201ENST00000355497 NAT10Q9H0A0 1025 aaKnown RBP18■□□□□ 0.47
LMX1B-201ENST00000355497 ERC2O15083 957 aa17.99■□□□□ 0.47
LMX1B-201ENST00000355497 MAP7D2Q96T17 732 aa17.99■□□□□ 0.47
LMX1B-201ENST00000355497 DCTN1Q14203 1278 aa17.99■□□□□ 0.47
LMX1B-201ENST00000355497 NECTIN2Q92692 538 aa17.98■□□□□ 0.47
LMX1B-201ENST00000355497 CCDC173Q0VFZ6 552 aa17.98■□□□□ 0.47
LMX1B-201ENST00000355497 HSP90AB4PQ58FF6 505 aa17.98■□□□□ 0.47
LMX1B-201ENST00000355497 APAF1O14727 1248 aa17.98■□□□□ 0.47
LMX1B-201ENST00000355497 DIAPH1O60610 1272 aaKnown RBP17.98■□□□□ 0.47
LMX1B-201ENST00000355497 CAGE1Q8TC20 777 aa17.98■□□□□ 0.47
LMX1B-201ENST00000355497 PRKRIP1Q9H875 184 aaPredicted RBP17.98■□□□□ 0.47
LMX1B-201ENST00000355497 ERCC4Q92889 916 aaPredicted RBP17.97■□□□□ 0.47
LMX1B-201ENST00000355497 EPS15P42566 896 aa17.97■□□□□ 0.47
LMX1B-201ENST00000355497 HSP90AB2PQ58FF8 381 aa17.97■□□□□ 0.47
LMX1B-201ENST00000355497 PDILTQ8N807 584 aa17.97■□□□□ 0.47
LMX1B-201ENST00000355497 BRMS1Q9HCU9 246 aa17.97■□□□□ 0.47
LMX1B-201ENST00000355497 RIPK4P57078 832 aa17.96■□□□□ 0.47
LMX1B-201ENST00000355497 FKBP5Q13451 457 aaPredicted RBP17.96■□□□□ 0.47
LMX1B-201ENST00000355497 CWC15Q9P013 229 aaKnown RBP17.96■□□□□ 0.47
LMX1B-201ENST00000355497 CCDC191Q8NCU4 936 aa17.96■□□□□ 0.47
LMX1B-201ENST00000355497 RALYLQ86SE5 291 aaKnown RBP17.95■□□□□ 0.46
LMX1B-201ENST00000355497 C22orf23Q9BZE7 217 aa17.95■□□□□ 0.46
LMX1B-201ENST00000355497 CWC22Q9HCG8 908 aaKnown RBP17.94■□□□□ 0.46
LMX1B-201ENST00000355497 OFD1O75665 1012 aa17.94■□□□□ 0.46
LMX1B-201ENST00000355497 MYO6Q9UM54 1294 aa17.94■□□□□ 0.46
LMX1B-201ENST00000355497 VGFO15240 615 aaPredicted RBP17.94■□□□□ 0.46
LMX1B-201ENST00000355497 R3HCC1Q9Y3T6 440 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms