RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 POGZQ7Z3K3 1410 aa29.25■■■□□ 2.27
LIMS2-202ENST00000355119 SYNMO15061 1565 aa29.25■■■□□ 2.27
LIMS2-202ENST00000355119 CC2D1BQ5T0F9 858 aaKnown RBP29.25■■■□□ 2.27
LIMS2-202ENST00000355119 MLH3Q9UHC1 1453 aa29.23■■■□□ 2.27
LIMS2-202ENST00000355119 IFT172Q9UG01 1749 aa29.21■■■□□ 2.27
LIMS2-202ENST00000355119 UGGT1Q9NYU2 1555 aa29.21■■■□□ 2.27
LIMS2-202ENST00000355119 HECW2Q9P2P5 1572 aa29.19■■■□□ 2.26
LIMS2-202ENST00000355119 PDE3BQ13370 1112 aa29.19■■■□□ 2.26
LIMS2-202ENST00000355119 ABCA6Q8N139 1617 aa29.19■■■□□ 2.26
LIMS2-202ENST00000355119 SLC24A1O60721 1099 aa29.18■■■□□ 2.26
LIMS2-202ENST00000355119 B4GALNT3Q6L9W6 998 aa29.17■■■□□ 2.26
LIMS2-202ENST00000355119 BLMP54132 1417 aaPredicted RBP29.16■■■□□ 2.26
LIMS2-202ENST00000355119 KNSTRNQ9Y448 316 aa29.15■■■□□ 2.26
LIMS2-202ENST00000355119 FRMPD1Q5SYB0 1578 aa29.15■■■□□ 2.26
LIMS2-202ENST00000355119 MROH2AA6NES4 1674 aa29.15■■■□□ 2.26
LIMS2-202ENST00000355119 NRXN1Q9ULB1 1477 aa29.14■■■□□ 2.26
LIMS2-202ENST00000355119 SENP3-EIF4A1A0A087X0R7 540 aa29.13■■■□□ 2.25
LIMS2-202ENST00000355119 ADGRB3O60242 1522 aa29.13■■■□□ 2.25
LIMS2-202ENST00000355119 KDM5AP29375 1690 aaKnown RBP29.13■■■□□ 2.25
LIMS2-202ENST00000355119 MYOM1P52179 1685 aa29.12■■■□□ 2.25
LIMS2-202ENST00000355119 NEO1Q92859 1461 aa29.11■■■□□ 2.25
LIMS2-202ENST00000355119 ADGRF5Q8IZF2 1346 aa29.11■■■□□ 2.25
LIMS2-202ENST00000355119 ASXL1Q8IXJ9 1541 aa29.1■■■□□ 2.25
LIMS2-202ENST00000355119 CFAP70Q5T0N1 1121 aa29.1■■■□□ 2.25
LIMS2-202ENST00000355119 NPC1L1Q9UHC9 1359 aa29.08■■■□□ 2.25
LIMS2-202ENST00000355119 AMER1Q5JTC6 1135 aaPredicted RBP29.08■■■□□ 2.25
LIMS2-202ENST00000355119 NPATQ14207 1427 aa29.06■■■□□ 2.24
LIMS2-202ENST00000355119 MYO3AQ8NEV4 1616 aa29.06■■■□□ 2.24
LIMS2-202ENST00000355119 SETBP1Q9Y6X0 1596 aa29.06■■■□□ 2.24
LIMS2-202ENST00000355119 PPP2R1AP30153 589 aa29.04■■■□□ 2.24
LIMS2-202ENST00000355119 ABCC3O15438 1527 aa29.04■■■□□ 2.24
LIMS2-202ENST00000355119 ERVK-7P63135 1459 aa29.03■■■□□ 2.24
LIMS2-202ENST00000355119 NOS1P29475 1434 aa29.02■■■□□ 2.24
LIMS2-202ENST00000355119 RCAN3Q9UKA8 241 aa29.02■■■□□ 2.24
LIMS2-202ENST00000355119 SBNO2Q9Y2G9 1366 aa29.01■■■□□ 2.23
LIMS2-202ENST00000355119 RRP1P56182 461 aaKnown RBP29.01■■■□□ 2.23
LIMS2-202ENST00000355119 GGT6Q6P531 493 aa29.01■■■□□ 2.23
LIMS2-202ENST00000355119 PPLO60437 1756 aa29■■■□□ 2.23
LIMS2-202ENST00000355119 PIK3C2GO75747 1445 aa29■■■□□ 2.23
LIMS2-202ENST00000355119 CCDC136Q96JN2 1154 aa29■■■□□ 2.23
LIMS2-202ENST00000355119 SALL2Q9Y467 1007 aaPredicted RBP29■■■□□ 2.23
LIMS2-202ENST00000355119 RPGRIP1LQ68CZ1 1315 aa28.98■■■□□ 2.23
LIMS2-202ENST00000355119 CAMSAP1Q5T5Y3 1602 aa28.98■■■□□ 2.23
LIMS2-202ENST00000355119 FANCIQ9NVI1 1328 aa28.97■■■□□ 2.23
LIMS2-202ENST00000355119 CHGAP10645 457 aaKnown RBP28.97■■■□□ 2.23
LIMS2-202ENST00000355119 DIP2CQ9Y2E4 1556 aa28.95■■■□□ 2.23
LIMS2-202ENST00000355119 WDR43Q15061 677 aaKnown RBP eCLIP28.94■■■□□ 2.22
LIMS2-202ENST00000355119 ADAMTS8Q9UP79 889 aa28.94■■■□□ 2.22
LIMS2-202ENST00000355119 ANP32EQ9BTT0 268 aa28.93■■■□□ 2.22
LIMS2-202ENST00000355119 C14orf93Q9H972 538 aaKnown RBP28.92■■■□□ 2.22
LIMS2-202ENST00000355119 CENPJQ9HC77 1338 aaPredicted RBP28.91■■■□□ 2.22
LIMS2-202ENST00000355119 CDCA7LQ96GN5 454 aa28.91■■■□□ 2.22
LIMS2-202ENST00000355119 RICTORQ6R327 1708 aa28.9■■■□□ 2.22
LIMS2-202ENST00000355119 RAPGEF3O95398 923 aa28.89■■■□□ 2.22
LIMS2-202ENST00000355119 PIK3C2BO00750 1634 aa28.89■■■□□ 2.22
LIMS2-202ENST00000355119 ZC3H13Q5T200 1668 aaKnown RBP28.89■■■□□ 2.21
LIMS2-202ENST00000355119 ADGRB1O14514 1584 aa28.88■■■□□ 2.21
LIMS2-202ENST00000355119 CFAP65Q6ZU64 1925 aaKnown RBP28.88■■■□□ 2.21
LIMS2-202ENST00000355119 ARHGAP31Q2M1Z3 1444 aa28.87■■■□□ 2.21
LIMS2-202ENST00000355119 SIGLEC1Q9BZZ2 1709 aa28.86■■■□□ 2.21
LIMS2-202ENST00000355119 QRICH2Q9H0J4 1663 aa28.85■■■□□ 2.21
LIMS2-202ENST00000355119 GLI2P10070 1586 aa28.83■■■□□ 2.21
LIMS2-202ENST00000355119 CARD14Q9BXL6 1004 aa28.82■■■□□ 2.2
LIMS2-202ENST00000355119 EXOC6Q8TAG9 804 aa28.81■■■□□ 2.2
LIMS2-202ENST00000355119 TRAK1Q9UPV9 953 aa28.81■■■□□ 2.2
LIMS2-202ENST00000355119 NEXMIFQ5QGS0 1516 aa28.79■■■□□ 2.2
LIMS2-202ENST00000355119 VGFO15240 615 aaPredicted RBP28.77■■■□□ 2.2
LIMS2-202ENST00000355119 PLEKHH1Q9ULM0 1364 aa28.77■■■□□ 2.2
LIMS2-202ENST00000355119 ZNF521Q96K83 1311 aa28.76■■■□□ 2.19
LIMS2-202ENST00000355119 YEATS2Q9ULM3 1422 aa28.74■■■□□ 2.19
LIMS2-202ENST00000355119 PUS7Q96PZ0 661 aaKnown RBP28.73■■■□□ 2.19
LIMS2-202ENST00000355119 MSH5O43196 834 aa28.72■■■□□ 2.19
LIMS2-202ENST00000355119 TMEM132EQ6IEE7 984 aa28.72■■■□□ 2.19
LIMS2-202ENST00000355119 GOLGA2Q08379 1002 aa28.72■■■□□ 2.19
LIMS2-202ENST00000355119 SLC52A1Q9NWF4 448 aa28.72■■■□□ 2.19
LIMS2-202ENST00000355119 ZFYVE9O95405 1425 aa28.71■■■□□ 2.19
LIMS2-202ENST00000355119 USP32Q8NFA0 1604 aa28.71■■■□□ 2.19
LIMS2-202ENST00000355119 NSD3Q9BZ95 1437 aa28.7■■■□□ 2.19
LIMS2-202ENST00000355119 DUSP27Q5VZP5 1158 aa28.7■■■□□ 2.18
LIMS2-202ENST00000355119 POLR3AO14802 1390 aaPredicted RBP28.7■■■□□ 2.18
LIMS2-202ENST00000355119 NGEFQ8N5V2 710 aa28.69■■■□□ 2.18
LIMS2-202ENST00000355119 ARHGEF28Q8N1W1 1705 aaKnown RBP28.69■■■□□ 2.18
LIMS2-202ENST00000355119 IDI1Q13907 227 aa28.67■■■□□ 2.18
LIMS2-202ENST00000355119 PREX1Q8TCU6 1659 aa28.67■■■□□ 2.18
LIMS2-202ENST00000355119 EVC2Q86UK5 1308 aa28.65■■■□□ 2.18
LIMS2-202ENST00000355119 SLFN5Q08AF3 891 aa28.64■■■□□ 2.18
LIMS2-202ENST00000355119 CCDC146Q8IYE0 955 aa28.64■■■□□ 2.18
LIMS2-202ENST00000355119 PLIN1O60240 522 aa28.64■■■□□ 2.17
LIMS2-202ENST00000355119 MORC1Q86VD1 984 aa28.64■■■□□ 2.17
LIMS2-202ENST00000355119 SLC12A5Q9H2X9 1139 aa28.64■■■□□ 2.17
LIMS2-202ENST00000355119 CYB5RLQ6IPT4 315 aa28.62■■■□□ 2.17
LIMS2-202ENST00000355119 CRBNQ96SW2 442 aa28.62■■■□□ 2.17
LIMS2-202ENST00000355119 TULP4Q9NRJ4 1543 aa28.62■■■□□ 2.17
LIMS2-202ENST00000355119 TMEM131LA2VDJ0 1609 aa28.61■■■□□ 2.17
LIMS2-202ENST00000355119 TRMT2AQ8IZ69 625 aaKnown RBP28.61■■■□□ 2.17
LIMS2-202ENST00000355119 APAF1O14727 1248 aa28.6■■■□□ 2.17
LIMS2-202ENST00000355119 NUTM2DQ5VT03 806 aaPredicted RBP28.6■■■□□ 2.17
LIMS2-202ENST00000355119 TCERG1O14776 1098 aaKnown RBP28.59■■■□□ 2.17
LIMS2-202ENST00000355119 CGNL1Q0VF96 1302 aa28.58■■■□□ 2.17
LIMS2-202ENST00000355119 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms