RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 NEXMIFQ5QGS0 1516 aa28.65■■■□□ 2.18
SIGMAR1-202ENST00000353468 MYO3AQ8NEV4 1616 aa28.64■■■□□ 2.18
SIGMAR1-202ENST00000353468 UBR1Q8IWV7 1749 aa28.63■■■□□ 2.17
SIGMAR1-202ENST00000353468 ADGRF5Q8IZF2 1346 aa28.63■■■□□ 2.17
SIGMAR1-202ENST00000353468 VGFO15240 615 aaPredicted RBP28.62■■■□□ 2.17
SIGMAR1-202ENST00000353468 NUTM2DQ5VT03 806 aaPredicted RBP28.61■■■□□ 2.17
SIGMAR1-202ENST00000353468 NRXN1Q9ULB1 1477 aa28.59■■■□□ 2.17
SIGMAR1-202ENST00000353468 ZFYVE9O95405 1425 aa28.58■■■□□ 2.17
SIGMAR1-202ENST00000353468 RIMS2Q9UQ26 1411 aa28.58■■■□□ 2.17
SIGMAR1-202ENST00000353468 RALGAPBQ86X10 1494 aa28.57■■■□□ 2.16
SIGMAR1-202ENST00000353468 THEMISQ8N1K5 641 aaPredicted RBP28.57■■■□□ 2.16
SIGMAR1-202ENST00000353468 CEP170BQ9Y4F5 1589 aaPredicted RBP28.57■■■□□ 2.16
SIGMAR1-202ENST00000353468 HDGFP51858 240 aaKnown RBP28.56■■■□□ 2.16
SIGMAR1-202ENST00000353468 TMEM2Q9UHN6 1383 aa28.55■■■□□ 2.16
SIGMAR1-202ENST00000353468 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.55■■■□□ 2.16
SIGMAR1-202ENST00000353468 TRPM1Q7Z4N2 1603 aa28.54■■■□□ 2.16
SIGMAR1-202ENST00000353468 PIK3C2GO75747 1445 aa28.52■■■□□ 2.16
SIGMAR1-202ENST00000353468 ROCK2O75116 1388 aaKnown RBP28.52■■■□□ 2.16
SIGMAR1-202ENST00000353468 ZNF142P52746 1687 aaPredicted RBP28.51■■■□□ 2.15
SIGMAR1-202ENST00000353468 NBPF1Q3BBV0 1214 aa28.51■■■□□ 2.15
SIGMAR1-202ENST00000353468 CFAP70Q5T0N1 1121 aa28.5■■■□□ 2.15
SIGMAR1-202ENST00000353468 SLIT1O75093 1534 aa28.49■■■□□ 2.15
SIGMAR1-202ENST00000353468 CARD11Q9BXL7 1154 aa28.49■■■□□ 2.15
SIGMAR1-202ENST00000353468 C14orf93Q9H972 538 aaKnown RBP28.48■■■□□ 2.15
SIGMAR1-202ENST00000353468 KIAA1210Q9ULL0 1709 aa28.48■■■□□ 2.15
SIGMAR1-202ENST00000353468 ARHGAP23Q9P227 1491 aa28.47■■■□□ 2.15
SIGMAR1-202ENST00000353468 GPRASP1Q5JY77 1395 aa28.46■■■□□ 2.15
SIGMAR1-202ENST00000353468 TXNDC2Q86VQ3 553 aa28.46■■■□□ 2.15
SIGMAR1-202ENST00000353468 EID1Q9Y6B2 187 aa28.45■■■□□ 2.15
SIGMAR1-202ENST00000353468 LTKP29376 864 aa28.45■■■□□ 2.14
SIGMAR1-202ENST00000353468 EIF4G2P78344 907 aaKnown RBP eCLIP28.44■■■□□ 2.14
SIGMAR1-202ENST00000353468 SENP3Q9H4L4 574 aaPredicted RBP28.42■■■□□ 2.14
SIGMAR1-202ENST00000353468 ZNF316A6NFI3 1004 aaPredicted RBP28.41■■■□□ 2.14
SIGMAR1-202ENST00000353468 HSPA5P11021 654 aaKnown RBP28.4■■■□□ 2.14
SIGMAR1-202ENST00000353468 LAMC1P11047 1609 aa28.39■■■□□ 2.13
SIGMAR1-202ENST00000353468 USP47Q96K76 1375 aa28.37■■■□□ 2.13
SIGMAR1-202ENST00000353468 PLEKHG1Q9ULL1 1385 aa28.37■■■□□ 2.13
SIGMAR1-202ENST00000353468 HIRIP3Q9BW71 556 aaPredicted RBP28.37■■■□□ 2.13
SIGMAR1-202ENST00000353468 SETBP1Q9Y6X0 1596 aa28.36■■■□□ 2.13
SIGMAR1-202ENST00000353468 SCAF11Q99590 1463 aaKnown RBP28.36■■■□□ 2.13
SIGMAR1-202ENST00000353468 ANKLE2Q86XL3 938 aa28.36■■■□□ 2.13
SIGMAR1-202ENST00000353468 ALKQ9UM73 1620 aa28.35■■■□□ 2.13
SIGMAR1-202ENST00000353468 BCANQ96GW7 911 aa28.35■■■□□ 2.13
SIGMAR1-202ENST00000353468 TMEM132EQ6IEE7 984 aa28.34■■■□□ 2.13
SIGMAR1-202ENST00000353468 ADGRB1O14514 1584 aa28.32■■■□□ 2.12
SIGMAR1-202ENST00000353468 NRXN3Q9Y4C0 1643 aa28.32■■■□□ 2.12
SIGMAR1-202ENST00000353468 IQGAP1P46940 1657 aa28.3■■■□□ 2.12
SIGMAR1-202ENST00000353468 ADAMTS13Q76LX8 1427 aa28.28■■■□□ 2.12
SIGMAR1-202ENST00000353468 ST20-MTHFSA0A0A6YYL1 179 aa28.27■■■□□ 2.12
SIGMAR1-202ENST00000353468 ASXL1Q8IXJ9 1541 aa28.26■■■□□ 2.12
SIGMAR1-202ENST00000353468 SETD1AO15047 1707 aaKnown RBP28.26■■■□□ 2.11
SIGMAR1-202ENST00000353468 LMTK3Q96Q04 1460 aa28.24■■■□□ 2.11
SIGMAR1-202ENST00000353468 SLC26A8Q96RN1 970 aa28.24■■■□□ 2.11
SIGMAR1-202ENST00000353468 TRAK1Q9UPV9 953 aa28.24■■■□□ 2.11
SIGMAR1-202ENST00000353468 MED14O60244 1454 aa28.24■■■□□ 2.11
SIGMAR1-202ENST00000353468 TBX22Q9Y458 520 aa28.23■■■□□ 2.11
SIGMAR1-202ENST00000353468 EIF3AQ14152 1382 aaKnown RBP28.22■■■□□ 2.11
SIGMAR1-202ENST00000353468 HSPA2P54652 639 aa28.22■■■□□ 2.11
SIGMAR1-202ENST00000353468 METP08581 1390 aa28.22■■■□□ 2.11
SIGMAR1-202ENST00000353468 NCKAP5LQ9HCH0 1330 aa28.21■■■□□ 2.11
SIGMAR1-202ENST00000353468 YTHDC2Q9H6S0 1430 aaKnown RBP28.21■■■□□ 2.11
SIGMAR1-202ENST00000353468 STK26Q9P289 416 aa28.2■■■□□ 2.11
SIGMAR1-202ENST00000353468 POLR1AO95602 1720 aaPredicted RBP28.19■■■□□ 2.1
SIGMAR1-202ENST00000353468 NPHP4O75161 1426 aaPredicted RBP28.18■■■□□ 2.1
SIGMAR1-202ENST00000353468 LRPPRCP42704 1394 aaKnown RBP28.18■■■□□ 2.1
SIGMAR1-202ENST00000353468 DIP2AQ14689 1571 aa28.18■■■□□ 2.1
SIGMAR1-202ENST00000353468 TESK2Q96S53 571 aa28.15■■■□□ 2.1
SIGMAR1-202ENST00000353468 ABCC11Q96J66 1382 aa28.14■■■□□ 2.1
SIGMAR1-202ENST00000353468 CENPJQ9HC77 1338 aaPredicted RBP28.13■■■□□ 2.09
SIGMAR1-202ENST00000353468 C11orf95C9JLR9 678 aaPredicted RBP28.11■■■□□ 2.09
SIGMAR1-202ENST00000353468 ARHGEF28Q8N1W1 1705 aaKnown RBP28.11■■■□□ 2.09
SIGMAR1-202ENST00000353468 PIK3R4Q99570 1358 aa28.09■■■□□ 2.09
SIGMAR1-202ENST00000353468 PTPRUQ92729 1446 aa28.09■■■□□ 2.09
SIGMAR1-202ENST00000353468 DLC1Q96QB1 1528 aa28.09■■■□□ 2.09
SIGMAR1-202ENST00000353468 TECPR2O15040 1411 aa28.07■■■□□ 2.08
SIGMAR1-202ENST00000353468 WASHC2AQ641Q2 1341 aa28.07■■■□□ 2.08
SIGMAR1-202ENST00000353468 SLC24A1O60721 1099 aa28.07■■■□□ 2.08
SIGMAR1-202ENST00000353468 SIRT1Q96EB6 747 aa28.07■■■□□ 2.08
SIGMAR1-202ENST00000353468 PRAM1Q96QH2 718 aa28.07■■■□□ 2.08
SIGMAR1-202ENST00000353468 POGKQ9P215 609 aa28.07■■■□□ 2.08
SIGMAR1-202ENST00000353468 AMOTL2Q9Y2J4 779 aa28.07■■■□□ 2.08
SIGMAR1-202ENST00000353468 TMF1P82094 1093 aa28.06■■■□□ 2.08
SIGMAR1-202ENST00000353468 KNDC1Q76NI1 1749 aa28.06■■■□□ 2.08
SIGMAR1-202ENST00000353468 SBNO2Q9Y2G9 1366 aa28.05■■■□□ 2.08
SIGMAR1-202ENST00000353468 CCDC7Q96M83 1385 aa28.04■■■□□ 2.08
SIGMAR1-202ENST00000353468 KIF7Q2M1P5 1343 aa28.04■■■□□ 2.08
SIGMAR1-202ENST00000353468 SAFB2Q14151 953 aaKnown RBP eCLIP28.03■■■□□ 2.08
SIGMAR1-202ENST00000353468 WAPLQ7Z5K2 1190 aa28.03■■■□□ 2.08
SIGMAR1-202ENST00000353468 QRICH2Q9H0J4 1663 aa28.03■■■□□ 2.08
SIGMAR1-202ENST00000353468 STRCQ7RTU9 1775 aa28.02■■■□□ 2.08
SIGMAR1-202ENST00000353468 CPS1P31327 1500 aa28.02■■■□□ 2.08
SIGMAR1-202ENST00000353468 FAM135BQ49AJ0 1406 aa28.02■■■□□ 2.08
SIGMAR1-202ENST00000353468 DISP3Q9P2K9 1392 aa28.01■■■□□ 2.07
SIGMAR1-202ENST00000353468 ROBO2Q9HCK4 1378 aa28■■■□□ 2.07
SIGMAR1-202ENST00000353468 PLEKHH1Q9ULM0 1364 aa27.99■■■□□ 2.07
SIGMAR1-202ENST00000353468 CHD2O14647 1828 aaKnown RBP27.99■■■□□ 2.07
SIGMAR1-202ENST00000353468 POLR3GLQ9BT43 218 aa27.98■■■□□ 2.07
SIGMAR1-202ENST00000353468 XRN1Q8IZH2 1706 aaKnown RBP27.97■■■□□ 2.07
SIGMAR1-202ENST00000353468 KCNA6P17658 529 aa27.97■■■□□ 2.07
SIGMAR1-202ENST00000353468 DDX10Q13206 875 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms