RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 MYOM2P54296 1465 aa38.81■■■■□ 3.8
SSBP4-202ENST00000348495 CEP170BQ9Y4F5 1589 aaPredicted RBP38.8■■■■□ 3.8
SSBP4-202ENST00000348495 NBPF8Q3BBV2 869 aa38.79■■■■□ 3.8
SSBP4-202ENST00000348495 ZNF142P52746 1687 aaPredicted RBP38.79■■■■□ 3.8
SSBP4-202ENST00000348495 PRAG1Q86YV5 1406 aa38.77■■■■□ 3.8
SSBP4-202ENST00000348495 NRXN1Q9ULB1 1477 aa38.74■■■■□ 3.79
SSBP4-202ENST00000348495 ZFYVE9O95405 1425 aa38.73■■■■□ 3.79
SSBP4-202ENST00000348495 TMEM2Q9UHN6 1383 aa38.71■■■■□ 3.79
SSBP4-202ENST00000348495 RIMS2Q9UQ26 1411 aa38.7■■■■□ 3.79
SSBP4-202ENST00000348495 ADGRF5Q8IZF2 1346 aa38.69■■■■□ 3.78
SSBP4-202ENST00000348495 ARHGAP23Q9P227 1491 aa38.67■■■■□ 3.78
SSBP4-202ENST00000348495 SLIT1O75093 1534 aa38.67■■■■□ 3.78
SSBP4-202ENST00000348495 VGFO15240 615 aaPredicted RBP38.66■■■■□ 3.78
SSBP4-202ENST00000348495 THEMISQ8N1K5 641 aaPredicted RBP38.66■■■■□ 3.78
SSBP4-202ENST00000348495 RALGAPBQ86X10 1494 aa38.63■■■■□ 3.77
SSBP4-202ENST00000348495 PIK3C2GO75747 1445 aa38.63■■■■□ 3.77
SSBP4-202ENST00000348495 TRPM1Q7Z4N2 1603 aa38.62■■■■□ 3.77
SSBP4-202ENST00000348495 NUTM2DQ5VT03 806 aaPredicted RBP38.62■■■■□ 3.77
SSBP4-202ENST00000348495 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.6■■■■□ 3.77
SSBP4-202ENST00000348495 HDGFP51858 240 aaKnown RBP38.57■■■■□ 3.76
SSBP4-202ENST00000348495 KIAA1210Q9ULL0 1709 aa38.56■■■■□ 3.76
SSBP4-202ENST00000348495 LTKP29376 864 aa38.52■■■■□ 3.76
SSBP4-202ENST00000348495 GPRASP1Q5JY77 1395 aa38.5■■■■□ 3.75
SSBP4-202ENST00000348495 C14orf93Q9H972 538 aaKnown RBP38.49■■■■□ 3.75
SSBP4-202ENST00000348495 NBPF1Q3BBV0 1214 aa38.48■■■■□ 3.75
SSBP4-202ENST00000348495 AEBP2Q6ZN18 517 aaPredicted RBP38.48■■■■□ 3.75
SSBP4-202ENST00000348495 TXNDC2Q86VQ3 553 aa38.48■■■■□ 3.75
SSBP4-202ENST00000348495 CFAP70Q5T0N1 1121 aa38.47■■■■□ 3.75
SSBP4-202ENST00000348495 EID1Q9Y6B2 187 aa38.47■■■■□ 3.75
SSBP4-202ENST00000348495 ROCK2O75116 1388 aaKnown RBP38.47■■■■□ 3.75
SSBP4-202ENST00000348495 SCAF11Q99590 1463 aaKnown RBP38.46■■■■□ 3.75
SSBP4-202ENST00000348495 SETBP1Q9Y6X0 1596 aa38.46■■■■□ 3.75
SSBP4-202ENST00000348495 LAMC1P11047 1609 aa38.46■■■■□ 3.75
SSBP4-202ENST00000348495 NRXN3Q9Y4C0 1643 aa38.45■■■■□ 3.75
SSBP4-202ENST00000348495 LMTK3Q96Q04 1460 aa38.44■■■■□ 3.74
SSBP4-202ENST00000348495 PLEKHG1Q9ULL1 1385 aa38.44■■■■□ 3.74
SSBP4-202ENST00000348495 ALKQ9UM73 1620 aa38.4■■■■□ 3.74
SSBP4-202ENST00000348495 ADGRB1O14514 1584 aa38.39■■■■□ 3.74
SSBP4-202ENST00000348495 ANKLE2Q86XL3 938 aa38.38■■■■□ 3.74
SSBP4-202ENST00000348495 CARD11Q9BXL7 1154 aa38.38■■■■□ 3.74
SSBP4-202ENST00000348495 IQGAP1P46940 1657 aa38.38■■■■□ 3.73
SSBP4-202ENST00000348495 SETD1AO15047 1707 aaKnown RBP38.37■■■■□ 3.73
SSBP4-202ENST00000348495 ADAMTS13Q76LX8 1427 aa38.34■■■■□ 3.73
SSBP4-202ENST00000348495 ASXL1Q8IXJ9 1541 aa38.34■■■■□ 3.73
SSBP4-202ENST00000348495 SENP3Q9H4L4 574 aaPredicted RBP38.33■■■■□ 3.73
SSBP4-202ENST00000348495 MED14O60244 1454 aa38.32■■■■□ 3.73
SSBP4-202ENST00000348495 POLR1AO95602 1720 aaPredicted RBP38.31■■■■□ 3.72
SSBP4-202ENST00000348495 USP47Q96K76 1375 aa38.29■■■■□ 3.72
SSBP4-202ENST00000348495 EIF4G2P78344 907 aaKnown RBP eCLIP38.28■■■■□ 3.726e-7■■□□□ 11.9
SSBP4-202ENST00000348495 TMEM132EQ6IEE7 984 aa38.26■■■■□ 3.72
SSBP4-202ENST00000348495 HSPA2P54652 639 aa38.26■■■■□ 3.71
SSBP4-202ENST00000348495 BCANQ96GW7 911 aa38.24■■■■□ 3.71
SSBP4-202ENST00000348495 DIP2AQ14689 1571 aa38.24■■■■□ 3.71
SSBP4-202ENST00000348495 HSPA5P11021 654 aaKnown RBP38.24■■■■□ 3.71
SSBP4-202ENST00000348495 NCKAP5LQ9HCH0 1330 aa38.22■■■■□ 3.71
SSBP4-202ENST00000348495 METP08581 1390 aa38.22■■■■□ 3.71
SSBP4-202ENST00000348495 NPHP4O75161 1426 aaPredicted RBP38.21■■■■□ 3.71
SSBP4-202ENST00000348495 TBX22Q9Y458 520 aa38.21■■■■□ 3.71
SSBP4-202ENST00000348495 SLC26A8Q96RN1 970 aa38.18■■■■□ 3.7
SSBP4-202ENST00000348495 YTHDC2Q9H6S0 1430 aaKnown RBP38.18■■■■□ 3.7
SSBP4-202ENST00000348495 HIRIP3Q9BW71 556 aaPredicted RBP38.14■■■■□ 3.7
SSBP4-202ENST00000348495 LRPPRCP42704 1394 aaKnown RBP38.13■■■■□ 3.7
SSBP4-202ENST00000348495 STRCQ7RTU9 1775 aa38.12■■■■□ 3.69
SSBP4-202ENST00000348495 ST20-MTHFSA0A0A6YYL1 179 aa38.11■■■■□ 3.69
SSBP4-202ENST00000348495 ZNF316A6NFI3 1004 aaPredicted RBP38.11■■■■□ 3.69
SSBP4-202ENST00000348495 EIF3AQ14152 1382 aaKnown RBP38.11■■■■□ 3.69
SSBP4-202ENST00000348495 TRAK1Q9UPV9 953 aa38.09■■■■□ 3.69
SSBP4-202ENST00000348495 ABCC11Q96J66 1382 aa38.09■■■■□ 3.69
SSBP4-202ENST00000348495 ARHGEF28Q8N1W1 1705 aaKnown RBP38.09■■■■□ 3.69
SSBP4-202ENST00000348495 PIK3R4Q99570 1358 aa38.08■■■■□ 3.69
SSBP4-202ENST00000348495 TECPR2O15040 1411 aa38.07■■■■□ 3.68
SSBP4-202ENST00000348495 KNDC1Q76NI1 1749 aa38.06■■■■□ 3.68
SSBP4-202ENST00000348495 DLC1Q96QB1 1528 aa38.06■■■■□ 3.68
SSBP4-202ENST00000348495 PTPRUQ92729 1446 aa38.06■■■■□ 3.68
SSBP4-202ENST00000348495 STK26Q9P289 416 aa38.06■■■■□ 3.68
SSBP4-202ENST00000348495 TESK2Q96S53 571 aa38.01■■■■□ 3.68
SSBP4-202ENST00000348495 CPS1P31327 1500 aa38■■■■□ 3.67
SSBP4-202ENST00000348495 XRN1Q8IZH2 1706 aaKnown RBP37.99■■■■□ 3.67
SSBP4-202ENST00000348495 CENPJQ9HC77 1338 aaPredicted RBP37.98■■■■□ 3.67
SSBP4-202ENST00000348495 CHD2O14647 1828 aaKnown RBP37.97■■■■□ 3.67
SSBP4-202ENST00000348495 SIRT1Q96EB6 747 aa37.97■■■■□ 3.67
SSBP4-202ENST00000348495 SBNO2Q9Y2G9 1366 aa37.95■■■■□ 3.67
SSBP4-202ENST00000348495 FAM135BQ49AJ0 1406 aa37.95■■■■□ 3.67
SSBP4-202ENST00000348495 AMOTL2Q9Y2J4 779 aa37.95■■■■□ 3.67
SSBP4-202ENST00000348495 QRICH2Q9H0J4 1663 aa37.94■■■■□ 3.66
SSBP4-202ENST00000348495 PRAM1Q96QH2 718 aa37.92■■■■□ 3.66
SSBP4-202ENST00000348495 ROBO2Q9HCK4 1378 aa37.92■■■■□ 3.66
SSBP4-202ENST00000348495 PTCH1Q13635 1447 aa37.91■■■■□ 3.66
SSBP4-202ENST00000348495 C11orf95C9JLR9 678 aaPredicted RBP37.91■■■■□ 3.66
SSBP4-202ENST00000348495 NWD1Q149M9 1564 aa37.89■■■■□ 3.66
SSBP4-202ENST00000348495 PLEKHH1Q9ULM0 1364 aa37.88■■■■□ 3.65
SSBP4-202ENST00000348495 KCNA6P17658 529 aa37.86■■■■□ 3.65
SSBP4-202ENST00000348495 WAPLQ7Z5K2 1190 aa37.86■■■■□ 3.65
SSBP4-202ENST00000348495 POGKQ9P215 609 aa37.86■■■■□ 3.65
SSBP4-202ENST00000348495 SLC24A1O60721 1099 aa37.84■■■■□ 3.65
SSBP4-202ENST00000348495 DISP3Q9P2K9 1392 aa37.83■■■■□ 3.65
SSBP4-202ENST00000348495 WASHC2AQ641Q2 1341 aa37.83■■■■□ 3.65
SSBP4-202ENST00000348495 TMF1P82094 1093 aa37.81■■■■□ 3.64
SSBP4-202ENST00000348495 CCDC7Q96M83 1385 aa37.81■■■■□ 3.64
SSBP4-202ENST00000348495 KIF7Q2M1P5 1343 aa37.8■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms