RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 KIF3BO15066 747 aa19■□□□□ 0.63
SMTN-202ENST00000347557 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMTN-202ENST00000347557 PREX2Q70Z35 1606 aa18.99■□□□□ 0.63
SMTN-202ENST00000347557 DDRGK1Q96HY6 314 aa18.99■□□□□ 0.63
SMTN-202ENST00000347557 IL27Q8NEV9 243 aa18.98■□□□□ 0.63
SMTN-202ENST00000347557 PRDM15P57071 1507 aaPredicted RBP18.98■□□□□ 0.63
SMTN-202ENST00000347557 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
SMTN-202ENST00000347557 CENPQQ7L2Z9 268 aaPredicted RBP18.98■□□□□ 0.63
SMTN-202ENST00000347557 TRAPPC8Q9Y2L5 1435 aa18.97■□□□□ 0.63
SMTN-202ENST00000347557 FRAT1Q92837 279 aaPredicted RBP18.96■□□□□ 0.63
SMTN-202ENST00000347557 RRP7AQ9Y3A4 280 aaKnown RBP18.96■□□□□ 0.63
SMTN-202ENST00000347557 ZMYM4Q5VZL5 1548 aa18.95■□□□□ 0.62
SMTN-202ENST00000347557 SLFN5Q08AF3 891 aa18.95■□□□□ 0.62
SMTN-202ENST00000347557 DMRT2Q9Y5R5 561 aa18.94■□□□□ 0.62
SMTN-202ENST00000347557 WDR7Q9Y4E6 1490 aa18.94■□□□□ 0.62
SMTN-202ENST00000347557 FAM161AQ3B820 660 aa18.93■□□□□ 0.62
SMTN-202ENST00000347557 ERCC6L2Q5T890 1561 aa18.93■□□□□ 0.62
SMTN-202ENST00000347557 KDM2BQ8NHM5 1336 aa18.92■□□□□ 0.62
SMTN-202ENST00000347557 DUOX2Q9NRD8 1548 aa18.92■□□□□ 0.62
SMTN-202ENST00000347557 UNC13BO14795 1591 aa18.91■□□□□ 0.62
SMTN-202ENST00000347557 COG6Q9Y2V7 657 aa18.9■□□□□ 0.62
SMTN-202ENST00000347557 PANK1Q8TE04 598 aa18.9■□□□□ 0.62
SMTN-202ENST00000347557 MYO5CQ9NQX4 1742 aa18.9■□□□□ 0.62
SMTN-202ENST00000347557 EIF2AK4Q9P2K8 1649 aaKnown RBP18.89■□□□□ 0.62
SMTN-202ENST00000347557 ADGRF5Q8IZF2 1346 aa18.89■□□□□ 0.61
SMTN-202ENST00000347557 NFKBIBQ15653 356 aa18.89■□□□□ 0.61
SMTN-202ENST00000347557 TRAK1Q9UPV9 953 aa18.89■□□□□ 0.61
SMTN-202ENST00000347557 BCL2L13Q9BXK5 485 aa18.89■□□□□ 0.61
SMTN-202ENST00000347557 CARD14Q9BXL6 1004 aa18.89■□□□□ 0.61
SMTN-202ENST00000347557 PODXL2Q9NZ53 605 aa18.89■□□□□ 0.61
SMTN-202ENST00000347557 C8orf34Q49A92 452 aa18.88■□□□□ 0.61
SMTN-202ENST00000347557 PLCH2O75038 1416 aa18.88■□□□□ 0.61
SMTN-202ENST00000347557 ZNF521Q96K83 1311 aa18.88■□□□□ 0.61
SMTN-202ENST00000347557 SCAF11Q99590 1463 aaKnown RBP18.88■□□□□ 0.61
SMTN-202ENST00000347557 IQGAP3Q86VI3 1631 aa18.87■□□□□ 0.61
SMTN-202ENST00000347557 USP35Q9P2H5 1018 aa18.87■□□□□ 0.61
SMTN-202ENST00000347557 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
SMTN-202ENST00000347557 MAST1Q9Y2H9 1570 aa18.87■□□□□ 0.61
SMTN-202ENST00000347557 IGHDP01880 384 aa18.86■□□□□ 0.61
SMTN-202ENST00000347557 EIF3AQ14152 1382 aaKnown RBP18.86■□□□□ 0.61
SMTN-202ENST00000347557 KANK1Q14678 1352 aa18.86■□□□□ 0.61
SMTN-202ENST00000347557 MORC1Q86VD1 984 aa18.86■□□□□ 0.61
SMTN-202ENST00000347557 E9PSI1 815 aa18.85■□□□□ 0.61
SMTN-202ENST00000347557 ASXL1Q8IXJ9 1541 aa18.84■□□□□ 0.61
SMTN-202ENST00000347557 CLUAP1Q96AJ1 413 aa18.84■□□□□ 0.61
SMTN-202ENST00000347557 TMEM132EQ6IEE7 984 aa18.83■□□□□ 0.61
SMTN-202ENST00000347557 CENPJQ9HC77 1338 aaPredicted RBP18.83■□□□□ 0.61
SMTN-202ENST00000347557 SLC12A5Q9H2X9 1139 aa18.83■□□□□ 0.6
SMTN-202ENST00000347557 INSRP06213 1382 aa18.83■□□□□ 0.6
SMTN-202ENST00000347557 SCAPERQ9BY12 1400 aa18.82■□□□□ 0.6
SMTN-202ENST00000347557 ABCC2Q92887 1545 aa18.82■□□□□ 0.6
SMTN-202ENST00000347557 ATP10AO60312 1499 aa18.82■□□□□ 0.6
SMTN-202ENST00000347557 SAFB2Q14151 953 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMTN-202ENST00000347557 BRPF3Q9ULD4 1205 aa18.81■□□□□ 0.6
SMTN-202ENST00000347557 FRAT2O75474 233 aaPredicted RBP18.8■□□□□ 0.6
SMTN-202ENST00000347557 PLXNC1O60486 1568 aa18.8■□□□□ 0.6
SMTN-202ENST00000347557 GSE1Q14687 1217 aa18.8■□□□□ 0.6
SMTN-202ENST00000347557 GGT6Q6P531 493 aa18.8■□□□□ 0.6
SMTN-202ENST00000347557 WWC1Q8IX03 1113 aa18.8■□□□□ 0.6
SMTN-202ENST00000347557 TNNQ9UQP3 1299 aa18.8■□□□□ 0.6
SMTN-202ENST00000347557 NKTRP30414 1462 aaKnown RBP18.79■□□□□ 0.6
SMTN-202ENST00000347557 LAMC1P11047 1609 aa18.79■□□□□ 0.6
SMTN-202ENST00000347557 CHD1O14646 1710 aa18.78■□□□□ 0.6
SMTN-202ENST00000347557 PIK3C2GO75747 1445 aa18.78■□□□□ 0.6
SMTN-202ENST00000347557 UGGT1Q9NYU2 1555 aa18.77■□□□□ 0.6
SMTN-202ENST00000347557 TRMT2AQ8IZ69 625 aaKnown RBP18.77■□□□□ 0.6
SMTN-202ENST00000347557 SLKQ9H2G2 1235 aaPredicted RBP18.77■□□□□ 0.6
SMTN-202ENST00000347557 MADDQ8WXG6 1647 aa18.77■□□□□ 0.6
SMTN-202ENST00000347557 SEC24BO95487 1268 aa18.76■□□□□ 0.59
SMTN-202ENST00000347557 TCP11L2Q8N4U5 519 aa18.76■□□□□ 0.59
SMTN-202ENST00000347557 MTHFSP49914 203 aa18.74■□□□□ 0.59
SMTN-202ENST00000347557 STAC3Q96MF2 364 aa18.74■□□□□ 0.59
SMTN-202ENST00000347557 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
SMTN-202ENST00000347557 CLTCL1P53675 1640 aa18.73■□□□□ 0.59
SMTN-202ENST00000347557 U2AF1L5P0DN76 240 aaPredicted RBP18.73■□□□□ 0.59
SMTN-202ENST00000347557 U2AF1Q01081 240 aaKnown RBP eCLIP18.73■□□□□ 0.59
SMTN-202ENST00000347557 SPRYD3Q8NCJ5 442 aa18.73■□□□□ 0.59
SMTN-202ENST00000347557 ABCC1P33527 1531 aa18.72■□□□□ 0.59
SMTN-202ENST00000347557 ARXQ96QS3 562 aa18.72■□□□□ 0.59
SMTN-202ENST00000347557 NSD3Q9BZ95 1437 aa18.72■□□□□ 0.59
SMTN-202ENST00000347557 RNF17Q9BXT8 1623 aaKnown RBP18.72■□□□□ 0.59
SMTN-202ENST00000347557 SYNMO15061 1565 aa18.71■□□□□ 0.59
SMTN-202ENST00000347557 RLBP1P12271 317 aa18.71■□□□□ 0.59
SMTN-202ENST00000347557 TRPM2O94759 1503 aa18.7■□□□□ 0.58
SMTN-202ENST00000347557 PDE3AQ14432 1141 aa18.7■□□□□ 0.58
SMTN-202ENST00000347557 RUNDC1Q96C34 613 aa18.7■□□□□ 0.58
SMTN-202ENST00000347557 ERVK-7P63135 1459 aa18.7■□□□□ 0.58
SMTN-202ENST00000347557 U2SURPO15042 1029 aaKnown RBP18.69■□□□□ 0.58
SMTN-202ENST00000347557 PTPRTO14522 1441 aa18.69■□□□□ 0.58
SMTN-202ENST00000347557 STK26Q9P289 416 aa18.69■□□□□ 0.58
SMTN-202ENST00000347557 IQGAP1P46940 1657 aa18.69■□□□□ 0.58
SMTN-202ENST00000347557 RARSP54136 660 aaKnown RBP18.69■□□□□ 0.58
SMTN-202ENST00000347557 ZCCHC11Q5TAX3 1644 aaKnown RBP18.68■□□□□ 0.58
SMTN-202ENST00000347557 CFAP53Q96M91 514 aa18.68■□□□□ 0.58
SMTN-202ENST00000347557 PCDHB15Q9Y5E8 787 aa18.68■□□□□ 0.58
SMTN-202ENST00000347557 NOS1P29475 1434 aa18.68■□□□□ 0.58
SMTN-202ENST00000347557 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
SMTN-202ENST00000347557 FANCAO15360 1455 aa18.68■□□□□ 0.58
SMTN-202ENST00000347557 TSR2Q969E8 191 aaKnown RBP18.66■□□□□ 0.58
SMTN-202ENST00000347557 CABP2Q9NPB3 220 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms