RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 WDR7Q9Y4E6 1490 aa15.44■□□□□ 0.06
APP-201ENST00000346798 CENPQQ7L2Z9 268 aaPredicted RBP15.44■□□□□ 0.06
APP-201ENST00000346798 DDRGK1Q96HY6 314 aa15.44■□□□□ 0.06
APP-201ENST00000346798 PPM1GO15355 546 aaPredicted RBP15.43■□□□□ 0.06
APP-201ENST00000346798 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
APP-201ENST00000346798 ERCC6L2Q5T890 1561 aa15.43■□□□□ 0.06
APP-201ENST00000346798 UNC13BO14795 1591 aa15.42■□□□□ 0.06
APP-201ENST00000346798 RRP7AQ9Y3A4 280 aaKnown RBP15.42■□□□□ 0.06
APP-201ENST00000346798 SLFN5Q08AF3 891 aa15.42■□□□□ 0.06
APP-201ENST00000346798 KDM2BQ8NHM5 1336 aa15.41■□□□□ 0.06
APP-201ENST00000346798 FRAT1Q92837 279 aaPredicted RBP15.41■□□□□ 0.06
APP-201ENST00000346798 DUOX2Q9NRD8 1548 aa15.41■□□□□ 0.06
APP-201ENST00000346798 EIF2AK4Q9P2K8 1649 aaKnown RBP15.4■□□□□ 0.06
APP-201ENST00000346798 FAM161AQ3B820 660 aa15.4■□□□□ 0.06
APP-201ENST00000346798 IQGAP3Q86VI3 1631 aa15.4■□□□□ 0.06
APP-201ENST00000346798 MAST1Q9Y2H9 1570 aa15.38■□□□□ 0.05
APP-201ENST00000346798 NFKBIBQ15653 356 aa15.38■□□□□ 0.05
APP-201ENST00000346798 PANK1Q8TE04 598 aa15.38■□□□□ 0.05
APP-201ENST00000346798 C8orf34Q49A92 452 aa15.38■□□□□ 0.05
APP-201ENST00000346798 COG6Q9Y2V7 657 aa15.38■□□□□ 0.05
APP-201ENST00000346798 ADGRF5Q8IZF2 1346 aa15.37■□□□□ 0.05
APP-201ENST00000346798 ZNF521Q96K83 1311 aa15.37■□□□□ 0.05
APP-201ENST00000346798 BCL2L13Q9BXK5 485 aa15.37■□□□□ 0.05
APP-201ENST00000346798 CARD14Q9BXL6 1004 aa15.37■□□□□ 0.05
APP-201ENST00000346798 PLCH2O75038 1416 aa15.36■□□□□ 0.05
APP-201ENST00000346798 SCAF11Q99590 1463 aaKnown RBP15.36■□□□□ 0.05
APP-201ENST00000346798 TRAK1Q9UPV9 953 aa15.36■□□□□ 0.05
APP-201ENST00000346798 IGHDP01880 384 aa15.35■□□□□ 0.05
APP-201ENST00000346798 USP35Q9P2H5 1018 aa15.35■□□□□ 0.05
APP-201ENST00000346798 ASXL1Q8IXJ9 1541 aa15.35■□□□□ 0.05
APP-201ENST00000346798 CHD1O14646 1710 aa15.34■□□□□ 0.05
APP-201ENST00000346798 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
APP-201ENST00000346798 PLXNC1O60486 1568 aa15.34■□□□□ 0.05
APP-201ENST00000346798 ATP10AO60312 1499 aa15.33■□□□□ 0.05
APP-201ENST00000346798 EIF3AQ14152 1382 aaKnown RBP15.33■□□□□ 0.05
APP-201ENST00000346798 LAMC1P11047 1609 aa15.33■□□□□ 0.05
APP-201ENST00000346798 E9PSI1 815 aa15.33■□□□□ 0.04
APP-201ENST00000346798 CLUAP1Q96AJ1 413 aa15.33■□□□□ 0.04
APP-201ENST00000346798 ABCC2Q92887 1545 aa15.33■□□□□ 0.04
APP-201ENST00000346798 INSRP06213 1382 aa15.32■□□□□ 0.04
APP-201ENST00000346798 MORC1Q86VD1 984 aa15.32■□□□□ 0.04
APP-201ENST00000346798 BRPF3Q9ULD4 1205 aa15.32■□□□□ 0.04
APP-201ENST00000346798 KANK1Q14678 1352 aa15.32■□□□□ 0.04
APP-201ENST00000346798 CENPJQ9HC77 1338 aaPredicted RBP15.32■□□□□ 0.04
APP-201ENST00000346798 TMEM132EQ6IEE7 984 aa15.32■□□□□ 0.04
APP-201ENST00000346798 MADDQ8WXG6 1647 aa15.32■□□□□ 0.04
APP-201ENST00000346798 SLC12A5Q9H2X9 1139 aa15.31■□□□□ 0.04
APP-201ENST00000346798 SCAPERQ9BY12 1400 aa15.31■□□□□ 0.04
APP-201ENST00000346798 FRAT2O75474 233 aaPredicted RBP15.31■□□□□ 0.04
APP-201ENST00000346798 UGGT1Q9NYU2 1555 aa15.31■□□□□ 0.04
APP-201ENST00000346798 TNNQ9UQP3 1299 aa15.31■□□□□ 0.04
APP-201ENST00000346798 NKTRP30414 1462 aaKnown RBP15.3■□□□□ 0.04
APP-201ENST00000346798 GSE1Q14687 1217 aa15.3■□□□□ 0.04
APP-201ENST00000346798 SAFB2Q14151 953 aaKnown RBP eCLIP15.3■□□□□ 0.04
APP-201ENST00000346798 WWC1Q8IX03 1113 aa15.3■□□□□ 0.04
APP-201ENST00000346798 PIK3C2GO75747 1445 aa15.29■□□□□ 0.04
APP-201ENST00000346798 RNF17Q9BXT8 1623 aaKnown RBP15.29■□□□□ 0.04
APP-201ENST00000346798 SEC24BO95487 1268 aa15.28■□□□□ 0.04
APP-201ENST00000346798 ANO8Q9HCE9 1232 aaPredicted RBP15.28■□□□□ 0.04
APP-201ENST00000346798 CLTCL1P53675 1640 aa15.28■□□□□ 0.04
APP-201ENST00000346798 TRMT2AQ8IZ69 625 aaKnown RBP15.28■□□□□ 0.04
APP-201ENST00000346798 SLKQ9H2G2 1235 aaPredicted RBP15.28■□□□□ 0.04
APP-201ENST00000346798 GGT6Q6P531 493 aa15.27■□□□□ 0.04
APP-201ENST00000346798 ABCC1P33527 1531 aa15.26■□□□□ 0.03
APP-201ENST00000346798 SYNMO15061 1565 aa15.26■□□□□ 0.03
APP-201ENST00000346798 IQGAP1P46940 1657 aa15.26■□□□□ 0.03
APP-201ENST00000346798 TCP11L2Q8N4U5 519 aa15.26■□□□□ 0.03
APP-201ENST00000346798 CFAP65Q6ZU64 1925 aaKnown RBP15.26■□□□□ 0.03
APP-201ENST00000346798 TRPM2O94759 1503 aa15.25■□□□□ 0.03
APP-201ENST00000346798 MTHFSP49914 203 aa15.24■□□□□ 0.03
APP-201ENST00000346798 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.24■□□□□ 0.03
APP-201ENST00000346798 ERVK-7P63135 1459 aa15.24■□□□□ 0.03
APP-201ENST00000346798 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
APP-201ENST00000346798 ARXQ96QS3 562 aa15.24■□□□□ 0.03
APP-201ENST00000346798 NSD3Q9BZ95 1437 aa15.24■□□□□ 0.03
APP-201ENST00000346798 ZCCHC11Q5TAX3 1644 aaKnown RBP15.23■□□□□ 0.03
APP-201ENST00000346798 CGNL1Q0VF96 1302 aa15.23■□□□□ 0.03
APP-201ENST00000346798 RLBP1P12271 317 aa15.23■□□□□ 0.03
APP-201ENST00000346798 PTPRTO14522 1441 aa15.22■□□□□ 0.03
APP-201ENST00000346798 U2AF1L5P0DN76 240 aaPredicted RBP15.22■□□□□ 0.03
APP-201ENST00000346798 U2AF1Q01081 240 aaKnown RBP eCLIP15.22■□□□□ 0.03
APP-201ENST00000346798 SPHKAPQ2M3C7 1700 aa15.22■□□□□ 0.03
APP-201ENST00000346798 STAC3Q96MF2 364 aa15.22■□□□□ 0.03
APP-201ENST00000346798 KDM5AP29375 1690 aaKnown RBP15.21■□□□□ 0.03
APP-201ENST00000346798 PDE3AQ14432 1141 aa15.21■□□□□ 0.03
APP-201ENST00000346798 PCDHB15Q9Y5E8 787 aa15.21■□□□□ 0.03
APP-201ENST00000346798 MYOM1P52179 1685 aa15.21■□□□□ 0.02
APP-201ENST00000346798 NOS1P29475 1434 aa15.21■□□□□ 0.02
APP-201ENST00000346798 RARSP54136 660 aaKnown RBP15.2■□□□□ 0.02
APP-201ENST00000346798 RUNDC1Q96C34 613 aa15.2■□□□□ 0.02
APP-201ENST00000346798 ZFYVE16Q7Z3T8 1539 aa15.2■□□□□ 0.02
APP-201ENST00000346798 FANCAO15360 1455 aa15.2■□□□□ 0.02
APP-201ENST00000346798 NPC1L1Q9UHC9 1359 aa15.2■□□□□ 0.02
APP-201ENST00000346798 U2SURPO15042 1029 aaKnown RBP15.19■□□□□ 0.02
APP-201ENST00000346798 STK26Q9P289 416 aa15.19■□□□□ 0.02
APP-201ENST00000346798 CEP152O94986 1710 aa15.19■□□□□ 0.02
APP-201ENST00000346798 TSR2Q969E8 191 aaKnown RBP15.19■□□□□ 0.02
APP-201ENST00000346798 CABP2Q9NPB3 220 aa15.18■□□□□ 0.02
APP-201ENST00000346798 CFAP53Q96M91 514 aa15.17■□□□□ 0.02
APP-201ENST00000346798 PDZRN3Q9UPQ7 1066 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms